RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 RRP15Q9Y3B9 282 aaKnown RBP11.56□□□□□ -0.56
CLDN2-202ENST00000540876 CD163L1Q9NR16 1453 aa11.56□□□□□ -0.56
CLDN2-202ENST00000540876 MTHFSP49914 203 aa11.56□□□□□ -0.56
CLDN2-202ENST00000540876 GRIPAP1Q4V328 841 aa11.56□□□□□ -0.56
CLDN2-202ENST00000540876 CCDC183Q5T5S1 534 aa11.56□□□□□ -0.56
CLDN2-202ENST00000540876 CXorf56Q9H5V9 222 aa11.56□□□□□ -0.56
CLDN2-202ENST00000540876 CDC45O75419 566 aa11.56□□□□□ -0.56
CLDN2-202ENST00000540876 TDO2P48775 406 aa11.56□□□□□ -0.56
CLDN2-202ENST00000540876 PSME1Q06323 249 aa11.56□□□□□ -0.56
CLDN2-202ENST00000540876 USP48Q86UV5 1035 aa11.56□□□□□ -0.56
CLDN2-202ENST00000540876 SMARCE1Q969G3 411 aa11.56□□□□□ -0.56
CLDN2-202ENST00000540876 FAM212AQ96EL1 285 aa11.56□□□□□ -0.56
CLDN2-202ENST00000540876 DDX19BQ9UMR2 479 aa11.56□□□□□ -0.56
CLDN2-202ENST00000540876 GPS2Q13227 327 aa11.55□□□□□ -0.56
CLDN2-202ENST00000540876 SRLQ86TD4 932 aa11.55□□□□□ -0.56
CLDN2-202ENST00000540876 DONSONQ9NYP3 566 aa11.55□□□□□ -0.56
CLDN2-202ENST00000540876 RGPD8O14715 1765 aaPredicted RBP11.55□□□□□ -0.56
CLDN2-202ENST00000540876 FYB1O15117 783 aa11.55□□□□□ -0.56
CLDN2-202ENST00000540876 U2AF1L5P0DN76 240 aaPredicted RBP11.55□□□□□ -0.56
CLDN2-202ENST00000540876 TPM4P67936 248 aa11.55□□□□□ -0.56
CLDN2-202ENST00000540876 U2AF1Q01081 240 aaKnown RBP eCLIP11.55□□□□□ -0.56
CLDN2-202ENST00000540876 NOM1Q5C9Z4 860 aaKnown RBP11.55□□□□□ -0.56
CLDN2-202ENST00000540876 PACS2Q86VP3 889 aa11.55□□□□□ -0.56
CLDN2-202ENST00000540876 ATG3Q9NT62 314 aa11.55□□□□□ -0.56
CLDN2-202ENST00000540876 SUFUQ9UMX1 484 aa11.55□□□□□ -0.56
CLDN2-202ENST00000540876 MYOM1P52179 1685 aa11.55□□□□□ -0.56
CLDN2-202ENST00000540876 PLEKHG3A1L390 1219 aa11.54□□□□□ -0.56
CLDN2-202ENST00000540876 ATP2B1P20020 1258 aa11.54□□□□□ -0.56
CLDN2-202ENST00000540876 PLA2G4AP47712 749 aa11.54□□□□□ -0.56
CLDN2-202ENST00000540876 FHOD1Q9Y613 1164 aa11.54□□□□□ -0.56
CLDN2-202ENST00000540876 GOLIM4O00461 696 aa11.54□□□□□ -0.56
CLDN2-202ENST00000540876 BRINP3Q76B58 766 aa11.54□□□□□ -0.56
CLDN2-202ENST00000540876 TCP11L2Q8N4U5 519 aa11.54□□□□□ -0.56
CLDN2-202ENST00000540876 ERO1AQ96HE7 468 aa11.54□□□□□ -0.56
CLDN2-202ENST00000540876 CFAP53Q96M91 514 aa11.54□□□□□ -0.56
CLDN2-202ENST00000540876 PUS7Q96PZ0 661 aaKnown RBP11.54□□□□□ -0.56
CLDN2-202ENST00000540876 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.54□□□□□ -0.56
CLDN2-202ENST00000540876 C1orf167Q5SNV9 1468 aa11.54□□□□□ -0.56
CLDN2-202ENST00000540876 USP32Q8NFA0 1604 aa11.54□□□□□ -0.56
CLDN2-202ENST00000540876 PNMA6AP0CW24 399 aaPredicted RBP11.53□□□□□ -0.56
CLDN2-202ENST00000540876 TSGA10IPQ3SY00 556 aa11.53□□□□□ -0.56
CLDN2-202ENST00000540876 GIMAP6Q6P9H5 292 aa11.53□□□□□ -0.56
CLDN2-202ENST00000540876 FAM43BQ6ZT52 329 aaPredicted RBP11.53□□□□□ -0.56
CLDN2-202ENST00000540876 CCDC91Q7Z6B0 441 aa11.53□□□□□ -0.56
CLDN2-202ENST00000540876 EXOC6BQ9Y2D4 811 aa11.53□□□□□ -0.56
CLDN2-202ENST00000540876 TRIM27P14373 513 aa11.53□□□□□ -0.56
CLDN2-202ENST00000540876 SLFNL1Q499Z3 407 aa11.53□□□□□ -0.56
CLDN2-202ENST00000540876 USP26Q9BXU7 913 aa11.53□□□□□ -0.56
CLDN2-202ENST00000540876 PTPRCP08575 1304 aa11.53□□□□□ -0.56
CLDN2-202ENST00000540876 BRD1O95696 1058 aa11.53□□□□□ -0.56
CLDN2-202ENST00000540876 MX1P20591 662 aa11.53□□□□□ -0.56
CLDN2-202ENST00000540876 ZCCHC17Q9NP64 241 aaKnown RBP11.53□□□□□ -0.56
CLDN2-202ENST00000540876 NRBP1Q9UHY1 535 aa11.53□□□□□ -0.56
CLDN2-202ENST00000540876 MST1RQ04912 1400 aa11.52□□□□□ -0.56
CLDN2-202ENST00000540876 LTBP4Q8N2S1 1624 aa11.52□□□□□ -0.56
CLDN2-202ENST00000540876 HSP90AB3PQ58FF7 597 aa11.52□□□□□ -0.57
CLDN2-202ENST00000540876 NOL8Q76FK4 1167 aaKnown RBP11.52□□□□□ -0.57
CLDN2-202ENST00000540876 ADGRB2O60241 1585 aa11.51□□□□□ -0.57
CLDN2-202ENST00000540876 UBAP1LF5GYI3 381 aa11.51□□□□□ -0.57
CLDN2-202ENST00000540876 SLU7O95391 586 aaKnown RBP11.51□□□□□ -0.57
CLDN2-202ENST00000540876 CLCN6P51797 869 aa11.51□□□□□ -0.57
CLDN2-202ENST00000540876 ERCC6LQ2NKX8 1250 aa11.51□□□□□ -0.57
CLDN2-202ENST00000540876 XIRP1Q702N8 1843 aaKnown RBP11.51□□□□□ -0.57
CLDN2-202ENST00000540876 TTC21BQ7Z4L5 1316 aa11.51□□□□□ -0.57
CLDN2-202ENST00000540876 CPSF1Q10570 1443 aaKnown RBP11.51□□□□□ -0.57
CLDN2-202ENST00000540876 KRT28Q7Z3Y7 464 aa11.51□□□□□ -0.57
CLDN2-202ENST00000540876 TMEM57Q8N5G2 664 aa11.51□□□□□ -0.57
CLDN2-202ENST00000540876 ABTB2Q8N961 1025 aa11.51□□□□□ -0.57
CLDN2-202ENST00000540876 RNF217Q8TC41 542 aa11.51□□□□□ -0.57
CLDN2-202ENST00000540876 RUNDC1Q96C34 613 aa11.51□□□□□ -0.57
CLDN2-202ENST00000540876 PTPN14Q15678 1187 aa11.5□□□□□ -0.57
CLDN2-202ENST00000540876 ZSCAN25Q6NSZ9 544 aa11.5□□□□□ -0.57
CLDN2-202ENST00000540876 CEP120Q8N960 986 aa11.5□□□□□ -0.57
CLDN2-202ENST00000540876 CABLES1Q8TDN4 633 aa11.5□□□□□ -0.57
CLDN2-202ENST00000540876 CDC42BPGQ6DT37 1551 aa11.5□□□□□ -0.57
CLDN2-202ENST00000540876 IRF6O14896 467 aa11.5□□□□□ -0.57
CLDN2-202ENST00000540876 FBXO18Q8NFZ0 1043 aa11.5□□□□□ -0.57
CLDN2-202ENST00000540876 LMAN1P49257 510 aa11.49□□□□□ -0.57
CLDN2-202ENST00000540876 NLRP6P59044 892 aa11.49□□□□□ -0.57
CLDN2-202ENST00000540876 GOLGA5Q8TBA6 731 aa11.49□□□□□ -0.57
CLDN2-202ENST00000540876 ZBTB40Q9NUA8 1239 aa11.49□□□□□ -0.57
CLDN2-202ENST00000540876 RNF20Q5VTR2 975 aa11.49□□□□□ -0.57
CLDN2-202ENST00000540876 H2AFXP16104 143 aaPredicted RBP11.49□□□□□ -0.57
CLDN2-202ENST00000540876 USP6P35125 1406 aa11.49□□□□□ -0.57
CLDN2-202ENST00000540876 MAGEA9P43362 315 aa11.49□□□□□ -0.57
CLDN2-202ENST00000540876 RRS1Q15050 365 aaKnown RBP11.49□□□□□ -0.57
CLDN2-202ENST00000540876 MNS1Q8NEH6 495 aa11.49□□□□□ -0.57
CLDN2-202ENST00000540876 TMX3Q96JJ7 454 aa11.49□□□□□ -0.57
CLDN2-202ENST00000540876 FMN2Q9NZ56 1722 aa11.49□□□□□ -0.57
CLDN2-202ENST00000540876 ANKARQ7Z5J8 1434 aa11.48□□□□□ -0.57
CLDN2-202ENST00000540876 USP27XA6NNY8 438 aa11.48□□□□□ -0.57
CLDN2-202ENST00000540876 KIF1CO43896 1103 aaKnown RBP11.48□□□□□ -0.57
CLDN2-202ENST00000540876 OAS2P29728 719 aaKnown RBP11.48□□□□□ -0.57
CLDN2-202ENST00000540876 MAP2K2P36507 400 aa11.48□□□□□ -0.57
CLDN2-202ENST00000540876 TMCO3Q6UWJ1 677 aa11.48□□□□□ -0.57
CLDN2-202ENST00000540876 ATF7IPQ6VMQ6 1270 aa11.48□□□□□ -0.57
CLDN2-202ENST00000540876 CERKQ8TCT0 537 aa11.48□□□□□ -0.57
CLDN2-202ENST00000540876 AK7Q96M32 723 aa11.48□□□□□ -0.57
CLDN2-202ENST00000540876 PLEKHG2Q9H7P9 1386 aa11.48□□□□□ -0.57
CLDN2-202ENST00000540876 NEK4P51957 841 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms