RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 DDX54Q8TDD1 881 aaKnown RBP6.29□□□□□ -1.4
PROM1-220ENST00000540805 TTC12Q9H892 705 aaPredicted RBP6.29□□□□□ -1.4
PROM1-220ENST00000540805 MSH6P52701 1360 aa6.28□□□□□ -1.4
PROM1-220ENST00000540805 VAMP4O75379 141 aa6.28□□□□□ -1.4
PROM1-220ENST00000540805 REC8O95072 547 aa6.28□□□□□ -1.4
PROM1-220ENST00000540805 API5Q9BZZ5 524 aaKnown RBP6.28□□□□□ -1.4
PROM1-220ENST00000540805 C9orf78Q9NZ63 289 aaPredicted RBP6.28□□□□□ -1.4
PROM1-220ENST00000540805 PHF14O94880 888 aa6.28□□□□□ -1.4
PROM1-220ENST00000540805 VPS53Q5VIR6 699 aa6.28□□□□□ -1.4
PROM1-220ENST00000540805 ST7Q9NRC1 585 aa6.28□□□□□ -1.4
PROM1-220ENST00000540805 MBIPQ9NS73 344 aa6.28□□□□□ -1.4
PROM1-220ENST00000540805 ABCA3Q99758 1704 aa6.28□□□□□ -1.4
PROM1-220ENST00000540805 KIF24Q5T7B8 1368 aa6.28□□□□□ -1.4
PROM1-220ENST00000540805 DTNBO60941 627 aa6.28□□□□□ -1.4
PROM1-220ENST00000540805 CAPN2P17655 700 aa6.28□□□□□ -1.4
PROM1-220ENST00000540805 ZC3H6P61129 1189 aaKnown RBP6.28□□□□□ -1.4
PROM1-220ENST00000540805 BCL2L12Q9HB09 334 aa6.28□□□□□ -1.4
PROM1-220ENST00000540805 GLI3P10071 1580 aa6.27□□□□□ -1.41
PROM1-220ENST00000540805 FLT4P35916 1363 aa6.27□□□□□ -1.41
PROM1-220ENST00000540805 ANKLE2Q86XL3 938 aa6.27□□□□□ -1.41
PROM1-220ENST00000540805 PIBF1Q8WXW3 757 aa6.27□□□□□ -1.41
PROM1-220ENST00000540805 DCTPP1Q9H773 170 aa6.27□□□□□ -1.41
PROM1-220ENST00000540805 LRP5O75197 1615 aa6.27□□□□□ -1.41
PROM1-220ENST00000540805 RILPL2Q969X0 211 aa6.27□□□□□ -1.41
PROM1-220ENST00000540805 TRIM34Q9BYJ4 488 aa6.27□□□□□ -1.41
PROM1-220ENST00000540805 C1orf167Q5SNV9 1468 aa6.27□□□□□ -1.41
PROM1-220ENST00000540805 ZNF335Q9H4Z2 1342 aaPredicted RBP6.27□□□□□ -1.41
PROM1-220ENST00000540805 SDSP20132 328 aa6.27□□□□□ -1.41
PROM1-220ENST00000540805 MCCP23508 829 aa6.27□□□□□ -1.41
PROM1-220ENST00000540805 GNAI1P63096 354 aa6.27□□□□□ -1.41
PROM1-220ENST00000540805 FKBP5Q13451 457 aaPredicted RBP6.27□□□□□ -1.41
PROM1-220ENST00000540805 DCTN1Q14203 1278 aa6.27□□□□□ -1.41
PROM1-220ENST00000540805 FAM184AQ8NB25 1140 aa6.27□□□□□ -1.41
PROM1-220ENST00000540805 GTF2F1P35269 517 aaKnown RBP eCLIP6.26□□□□□ -1.41
PROM1-220ENST00000540805 UVSSAQ2YD98 709 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 C8orf58Q8NAV2 365 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 GTPBP4Q9BZE4 634 aaKnown RBP6.26□□□□□ -1.41
PROM1-220ENST00000540805 IFT57Q9NWB7 429 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 KCNG1Q9UIX4 513 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 PXDNQ92626 1479 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 ERC2O15083 957 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 FOXO3O43524 673 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 KIF20AO95235 890 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 BRD1O95696 1058 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 HOXC9P31274 260 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 MCM2P49736 904 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 LMOD3Q0VAK6 560 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 NEXNQ0ZGT2 675 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 NOLC1Q14978 699 aaKnown RBP eCLIP6.26□□□□□ -1.41
PROM1-220ENST00000540805 C16orf71Q8IYS4 520 aaPredicted RBP6.26□□□□□ -1.41
PROM1-220ENST00000540805 EYA1Q99502 592 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 SHANK3Q9BYB0 1731 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 CHL1O00533 1208 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 HMMRO75330 724 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 LETM1O95202 739 aaPredicted RBP6.26□□□□□ -1.41
PROM1-220ENST00000540805 ADAMTS2O95450 1211 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 TWISTNBQ3B726 338 aaPredicted RBP6.26□□□□□ -1.41
PROM1-220ENST00000540805 CREBRFQ8IUR6 639 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 TMX3Q96JJ7 454 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 PRDM11Q9NQV5 511 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 KIF3AQ9Y496 699 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 RTL1A6NKG5 1358 aa6.26□□□□□ -1.41
PROM1-220ENST00000540805 SULT6B1Q6IMI4 303 aa6.25□□□□□ -1.41
PROM1-220ENST00000540805 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.25□□□□□ -1.41
PROM1-220ENST00000540805 VPS37DQ86XT2 251 aa6.25□□□□□ -1.41
PROM1-220ENST00000540805 HSP90B1P14625 803 aaKnown RBP6.25□□□□□ -1.41
PROM1-220ENST00000540805 NEK4P51957 841 aa6.25□□□□□ -1.41
PROM1-220ENST00000540805 MTHFSDQ2M296 383 aaKnown RBP6.25□□□□□ -1.41
PROM1-220ENST00000540805 ANKRD44Q8N8A2 993 aa6.25□□□□□ -1.41
PROM1-220ENST00000540805 OTUD7AQ8TE49 926 aaPredicted RBP6.25□□□□□ -1.41
PROM1-220ENST00000540805 UBAP1LF5GYI3 381 aa6.25□□□□□ -1.41
PROM1-220ENST00000540805 APPP05067 770 aa6.25□□□□□ -1.41
PROM1-220ENST00000540805 KRT24Q2M2I5 525 aa6.25□□□□□ -1.41
PROM1-220ENST00000540805 TOM1L2Q6ZVM7 507 aa6.25□□□□□ -1.41
PROM1-220ENST00000540805 PDCL2Q8N4E4 241 aa6.25□□□□□ -1.41
PROM1-220ENST00000540805 RASSF8Q8NHQ8 419 aa6.25□□□□□ -1.41
PROM1-220ENST00000540805 USP25Q9UHP3 1055 aa6.25□□□□□ -1.41
PROM1-220ENST00000540805 PKD1L3Q7Z443 1732 aa6.24□□□□□ -1.41
PROM1-220ENST00000540805 RGS22Q8NE09 1264 aa6.24□□□□□ -1.41
PROM1-220ENST00000540805 ORAI2Q96SN7 254 aa6.24□□□□□ -1.41
PROM1-220ENST00000540805 MTMR7Q9Y216 660 aa6.24□□□□□ -1.41
PROM1-220ENST00000540805 CEMIPQ8WUJ3 1361 aa6.24□□□□□ -1.41
PROM1-220ENST00000540805 SMARCA5O60264 1052 aaPredicted RBP6.24□□□□□ -1.41
PROM1-220ENST00000540805 MYCNP04198 464 aaPredicted RBP6.24□□□□□ -1.41
PROM1-220ENST00000540805 DCCP43146 1447 aa6.24□□□□□ -1.41
PROM1-220ENST00000540805 CHAF1AQ13111 956 aaPredicted RBP6.24□□□□□ -1.41
PROM1-220ENST00000540805 RPAP2Q8IXW5 612 aaPredicted RBP6.24□□□□□ -1.41
PROM1-220ENST00000540805 TSPYL4Q9UJ04 414 aa6.24□□□□□ -1.41
PROM1-220ENST00000540805 ATP10DQ9P241 1426 aa6.24□□□□□ -1.41
PROM1-220ENST00000540805 SCN11AQ9UI33 1791 aa6.24□□□□□ -1.41
PROM1-220ENST00000540805 ADCY5O95622 1261 aa6.24□□□□□ -1.41
PROM1-220ENST00000540805 CUL4AQ13619 759 aa6.24□□□□□ -1.41
PROM1-220ENST00000540805 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.24□□□□□ -1.41
PROM1-220ENST00000540805 V9GYY5 206 aaPredicted RBP6.24□□□□□ -1.41
PROM1-220ENST00000540805 ABCC6O95255 1503 aa6.24□□□□□ -1.41
PROM1-220ENST00000540805 KAT6BQ8WYB5 2073 aa6.24□□□□□ -1.41
PROM1-220ENST00000540805 KIAA0232Q92628 1395 aa6.24□□□□□ -1.41
PROM1-220ENST00000540805 CACNA1FO60840 1977 aa6.23□□□□□ -1.41
PROM1-220ENST00000540805 MARCH6O60337 910 aa6.23□□□□□ -1.41
PROM1-220ENST00000540805 SF3B2Q13435 895 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms