RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 NIP7Q9Y221 180 aaKnown RBP eCLIP19.13■□□□□ 0.65
MSRB3-209ENST00000540804 RRP7AQ9Y3A4 280 aaKnown RBP19.13■□□□□ 0.65
MSRB3-209ENST00000540804 DLG5Q8TDM6 1919 aa19.13■□□□□ 0.65
MSRB3-209ENST00000540804 MYL6BP14649 208 aa19.12■□□□□ 0.65
MSRB3-209ENST00000540804 RIPK4P57078 832 aa19.12■□□□□ 0.65
MSRB3-209ENST00000540804 ST5P78524 1137 aa19.12■□□□□ 0.65
MSRB3-209ENST00000540804 CLEC4GQ6UXB4 293 aa19.12■□□□□ 0.65
MSRB3-209ENST00000540804 TOMM70O94826 608 aa19.11■□□□□ 0.65
MSRB3-209ENST00000540804 SRGNP10124 158 aa19.11■□□□□ 0.65
MSRB3-209ENST00000540804 LMNB1P20700 586 aa19.11■□□□□ 0.65
MSRB3-209ENST00000540804 TTLL7Q6ZT98 887 aa19.11■□□□□ 0.65
MSRB3-209ENST00000540804 ZNF652Q9Y2D9 606 aa19.11■□□□□ 0.65
MSRB3-209ENST00000540804 KDM3BQ7LBC6 1761 aa19.11■□□□□ 0.65
MSRB3-209ENST00000540804 MYBBP1AQ9BQG0 1328 aaKnown RBP19.1■□□□□ 0.65
MSRB3-209ENST00000540804 PNNQ9H307 717 aaKnown RBP19.1■□□□□ 0.65
MSRB3-209ENST00000540804 TMPOP42166 694 aaKnown RBP19.09■□□□□ 0.65
MSRB3-209ENST00000540804 NEUROD2Q15784 382 aa19.09■□□□□ 0.65
MSRB3-209ENST00000540804 PRPF40BQ6NWY9 871 aaKnown RBP19.09■□□□□ 0.65
MSRB3-209ENST00000540804 TSPYL4Q9UJ04 414 aa19.09■□□□□ 0.65
MSRB3-209ENST00000540804 KDM2BQ8NHM5 1336 aa19.08■□□□□ 0.65
MSRB3-209ENST00000540804 STYK1Q6J9G0 422 aa19.08■□□□□ 0.64
MSRB3-209ENST00000540804 MASTLQ96GX5 879 aa19.08■□□□□ 0.64
MSRB3-209ENST00000540804 ZBTB3Q9H5J0 574 aa19.08■□□□□ 0.64
MSRB3-209ENST00000540804 PDZRN3Q9UPQ7 1066 aa19.08■□□□□ 0.64
MSRB3-209ENST00000540804 SBF1O95248 1867 aa19.07■□□□□ 0.64
MSRB3-209ENST00000540804 OLFM4Q6UX06 510 aa19.07■□□□□ 0.64
MSRB3-209ENST00000540804 LAMB4A4D0S4 1761 aa19.06■□□□□ 0.64
MSRB3-209ENST00000540804 ANXA1P04083 346 aa19.06■□□□□ 0.64
MSRB3-209ENST00000540804 GPTP24298 496 aa19.06■□□□□ 0.64
MSRB3-209ENST00000540804 TPTE2Q6XPS3 522 aa19.06■□□□□ 0.64
MSRB3-209ENST00000540804 NUTM1Q86Y26 1132 aa19.06■□□□□ 0.64
MSRB3-209ENST00000540804 C16orf71Q8IYS4 520 aaPredicted RBP19.06■□□□□ 0.64
MSRB3-209ENST00000540804 CNKSR1Q969H4 720 aa19.06■□□□□ 0.64
MSRB3-209ENST00000540804 MAP3K15Q6ZN16 1313 aa19.05■□□□□ 0.64
MSRB3-209ENST00000540804 EIF2S2P20042 333 aaKnown RBP19.05■□□□□ 0.64
MSRB3-209ENST00000540804 HTRA3P83110 453 aa19.05■□□□□ 0.64
MSRB3-209ENST00000540804 ABCC12Q96J65 1359 aa19.05■□□□□ 0.64
MSRB3-209ENST00000540804 GLTPD2A6NH11 291 aa19.04■□□□□ 0.64
MSRB3-209ENST00000540804 PDIA6Q15084 440 aa19.04■□□□□ 0.64
MSRB3-209ENST00000540804 KRT24Q2M2I5 525 aa19.04■□□□□ 0.64
MSRB3-209ENST00000540804 PROSER3Q2NL68 480 aa19.04■□□□□ 0.64
MSRB3-209ENST00000540804 RBM46Q8TBY0 533 aaKnown RBP19.04■□□□□ 0.64
MSRB3-209ENST00000540804 C7orf43Q8WVR3 580 aa19.04■□□□□ 0.64
MSRB3-209ENST00000540804 NECTIN2Q92692 538 aa19.04■□□□□ 0.64
MSRB3-209ENST00000540804 ADAMTS8Q9UP79 889 aa19.04■□□□□ 0.64
MSRB3-209ENST00000540804 SLX4Q8IY92 1834 aa19.04■□□□□ 0.64
MSRB3-209ENST00000540804 UBN2Q6ZU65 1347 aa19.03■□□□□ 0.64
MSRB3-209ENST00000540804 KLRG2A4D1S0 409 aaPredicted RBP19.03■□□□□ 0.64
MSRB3-209ENST00000540804 NPR1P16066 1061 aa19.03■□□□□ 0.64
MSRB3-209ENST00000540804 GTF2E1P29083 439 aaPredicted RBP19.03■□□□□ 0.64
MSRB3-209ENST00000540804 ERFEQ4G0M1 354 aa19.03■□□□□ 0.64
MSRB3-209ENST00000540804 KIF6Q6ZMV9 814 aa19.03■□□□□ 0.64
MSRB3-209ENST00000540804 LRP10Q7Z4F1 713 aa19.03■□□□□ 0.64
MSRB3-209ENST00000540804 TRIM35Q9UPQ4 493 aa19.03■□□□□ 0.64
MSRB3-209ENST00000540804 POTECB2RU33 542 aa19.02■□□□□ 0.64
MSRB3-209ENST00000540804 ERVV-1B6SEH8 477 aa19.02■□□□□ 0.64
MSRB3-209ENST00000540804 RGL2O15211 777 aa19.02■□□□□ 0.64
MSRB3-209ENST00000540804 SUSD4Q5VX71 490 aa19.02■□□□□ 0.64
MSRB3-209ENST00000540804 SLC51AQ86UW1 340 aa19.02■□□□□ 0.64
MSRB3-209ENST00000540804 TAOK3Q9H2K8 898 aa19.02■□□□□ 0.64
MSRB3-209ENST00000540804 LAS1LQ9Y4W2 734 aaKnown RBP19.02■□□□□ 0.64
MSRB3-209ENST00000540804 ZC3H4Q9UPT8 1303 aaKnown RBP19.01■□□□□ 0.63
MSRB3-209ENST00000540804 TIAM2Q8IVF5 1701 aa19.01■□□□□ 0.63
MSRB3-209ENST00000540804 WDR43Q15061 677 aaKnown RBP eCLIP19.01■□□□□ 0.63
MSRB3-209ENST00000540804 RUNDC1Q96C34 613 aa19.01■□□□□ 0.63
MSRB3-209ENST00000540804 TNRC6CQ9HCJ0 1690 aaKnown RBP19.01■□□□□ 0.63
MSRB3-209ENST00000540804 APLP1P51693 650 aa19■□□□□ 0.63
MSRB3-209ENST00000540804 PRKRIP1Q9H875 184 aaPredicted RBP19■□□□□ 0.63
MSRB3-209ENST00000540804 LTBP3Q9NS15 1303 aa19■□□□□ 0.63
MSRB3-209ENST00000540804 CACNA1SQ13698 1873 aa18.99■□□□□ 0.63
MSRB3-209ENST00000540804 LMOD3Q0VAK6 560 aa18.99■□□□□ 0.63
MSRB3-209ENST00000540804 C3orf67Q6ZVT6 689 aa18.99■□□□□ 0.63
MSRB3-209ENST00000540804 ZNF34Q8IZ26 560 aa18.99■□□□□ 0.63
MSRB3-209ENST00000540804 DDNO94850 711 aaPredicted RBP18.98■□□□□ 0.63
MSRB3-209ENST00000540804 VEGFAP15692 232 aaPredicted RBP18.98■□□□□ 0.63
MSRB3-209ENST00000540804 CCDC93Q567U6 631 aa18.98■□□□□ 0.63
MSRB3-209ENST00000540804 GIGYF2Q6Y7W6 1299 aaKnown RBP18.98■□□□□ 0.63
MSRB3-209ENST00000540804 DNAJC5GQ8N7S2 189 aa18.98■□□□□ 0.63
MSRB3-209ENST00000540804 FER1L6Q2WGJ9 1857 aa18.98■□□□□ 0.63
MSRB3-209ENST00000540804 ERBB4Q15303 1308 aa18.98■□□□□ 0.63
MSRB3-209ENST00000540804 CHL1O00533 1208 aa18.97■□□□□ 0.63
MSRB3-209ENST00000540804 NTSR2O95665 410 aa18.97■□□□□ 0.63
MSRB3-209ENST00000540804 FSTL1Q12841 308 aa18.97■□□□□ 0.63
MSRB3-209ENST00000540804 AIMP1Q12904 312 aaKnown RBP18.97■□□□□ 0.63
MSRB3-209ENST00000540804 ZNF428Q96B54 188 aa18.97■□□□□ 0.63
MSRB3-209ENST00000540804 NYXQ9GZU5 481 aa18.97■□□□□ 0.63
MSRB3-209ENST00000540804 ZNF277Q9NRM2 450 aaPredicted RBP18.97■□□□□ 0.63
MSRB3-209ENST00000540804 CRY2Q49AN0 593 aa18.96■□□□□ 0.63
MSRB3-209ENST00000540804 SOGA3Q5TF21 947 aa18.96■□□□□ 0.63
MSRB3-209ENST00000540804 DPY19L2Q6NUT2 758 aa18.96■□□□□ 0.63
MSRB3-209ENST00000540804 BABAM1Q9NWV8 329 aa18.96■□□□□ 0.63
MSRB3-209ENST00000540804 CCDC88AQ3V6T2 1871 aa18.96■□□□□ 0.63
MSRB3-209ENST00000540804 TCERG1O14776 1098 aaKnown RBP18.95■□□□□ 0.62
MSRB3-209ENST00000540804 COPS6Q7L5N1 327 aa18.95■□□□□ 0.62
MSRB3-209ENST00000540804 SMC1BQ8NDV3 1235 aa18.95■□□□□ 0.62
MSRB3-209ENST00000540804 XAGE3Q8WTP9 111 aa18.95■□□□□ 0.62
MSRB3-209ENST00000540804 ARFGEF2Q9Y6D5 1785 aa18.95■□□□□ 0.62
MSRB3-209ENST00000540804 FKBP4Q02790 459 aaKnown RBP eCLIP18.94■□□□□ 0.62
MSRB3-209ENST00000540804 NUP98P52948 1817 aa18.94■□□□□ 0.62
MSRB3-209ENST00000540804 POTEIP0CG38 1075 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms