RNA–Protein interactions for RNA: ENST00000540501.1

STIP1-208, Transcript of stress induced phosphoprotein 1, human

TSL 3

Gene STIP1, Length 880 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STIP1-208	ENST00000540501	FRAT1	Q92837	279 aa	Predicted RBP	32.7	■■■□□ 2.83
STIP1-208	ENST00000540501	ZPR1	O75312	459 aa		32.69	■■■□□ 2.82
STIP1-208	ENST00000540501	RIC3	Q7Z5B4	369 aa		32.69	■■■□□ 2.82
STIP1-208	ENST00000540501	ARHGEF1	Q92888	912 aa	Known RBP	32.69	■■■□□ 2.82
STIP1-208	ENST00000540501	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.69	■■■□□ 2.82
STIP1-208	ENST00000540501	NARF	Q9UHQ1	456 aa		32.69	■■■□□ 2.82
STIP1-208	ENST00000540501	MAP3K15	Q6ZN16	1313 aa		32.69	■■■□□ 2.82
STIP1-208	ENST00000540501	ATF7IP	Q6VMQ6	1270 aa		32.68	■■■□□ 2.82
STIP1-208	ENST00000540501	TTLL7	Q6ZT98	887 aa		32.68	■■■□□ 2.82
STIP1-208	ENST00000540501	PHF14	O94880	888 aa		32.67	■■■□□ 2.82
STIP1-208	ENST00000540501	ZNF652	Q9Y2D9	606 aa		32.67	■■■□□ 2.82
STIP1-208	ENST00000540501	TUBGCP6	Q96RT7	1819 aa		32.67	■■■□□ 2.82
STIP1-208	ENST00000540501	HSP90AB3P	Q58FF7	597 aa		32.66	■■■□□ 2.82
STIP1-208	ENST00000540501	CLEC4G	Q6UXB4	293 aa		32.66	■■■□□ 2.82
STIP1-208	ENST00000540501	TBC1D2B	Q9UPU7	963 aa		32.66	■■■□□ 2.82
STIP1-208	ENST00000540501	PI4KAP2	A4QPH2	592 aa		32.65	■■■□□ 2.82
STIP1-208	ENST00000540501	PI4KAP1	Q8N8J0	262 aa		32.65	■■■□□ 2.82
STIP1-208	ENST00000540501	DNAAF4	Q8WXU2	420 aa		32.64	■■■□□ 2.82
STIP1-208	ENST00000540501	C4A	P0C0L4	1744 aa		32.63	■■■□□ 2.81
STIP1-208	ENST00000540501	PNPLA7	Q6ZV29	1317 aa		32.63	■■■□□ 2.81
STIP1-208	ENST00000540501	GIGYF2	Q6Y7W6	1299 aa	Known RBP	32.63	■■■□□ 2.81
STIP1-208	ENST00000540501	USP42	Q9H9J4	1324 aa	Known RBP	32.62	■■■□□ 2.81
STIP1-208	ENST00000540501	CAMTA2	O94983	1202 aa		32.62	■■■□□ 2.81
STIP1-208	ENST00000540501	RRP1	P56182	461 aa	Known RBP	32.62	■■■□□ 2.81
STIP1-208	ENST00000540501	NEXN	Q0ZGT2	675 aa		32.62	■■■□□ 2.81
STIP1-208	ENST00000540501	MAP3K2	Q9Y2U5	619 aa		32.62	■■■□□ 2.81
STIP1-208	ENST00000540501	BCOR	Q6W2J9	1755 aa		32.62	■■■□□ 2.81
STIP1-208	ENST00000540501	RNF123	Q5XPI4	1314 aa		32.61	■■■□□ 2.81
STIP1-208	ENST00000540501	AMIGO3	Q86WK7	504 aa		32.61	■■■□□ 2.81
STIP1-208	ENST00000540501	COL23A1	Q86Y22	540 aa	Predicted RBP	32.61	■■■□□ 2.81
STIP1-208	ENST00000540501	ZBTB3	Q9H5J0	574 aa		32.61	■■■□□ 2.81
STIP1-208	ENST00000540501	NUP98	P52948	1817 aa		32.61	■■■□□ 2.81
STIP1-208	ENST00000540501	ARFGEF2	Q9Y6D5	1785 aa		32.6	■■■□□ 2.81
STIP1-208	ENST00000540501	ADCY9	O60503	1353 aa		32.6	■■■□□ 2.81
STIP1-208	ENST00000540501	TRIM27	P14373	513 aa		32.6	■■■□□ 2.81
STIP1-208	ENST00000540501	FTSJ3	Q8IY81	847 aa	Known RBP	32.6	■■■□□ 2.81
STIP1-208	ENST00000540501	METTL22	Q9BUU2	404 aa	Predicted RBP	32.6	■■■□□ 2.81
STIP1-208	ENST00000540501	SUPT16H	Q9Y5B9	1047 aa	Known RBP	32.6	■■■□□ 2.81
STIP1-208	ENST00000540501	SCN7A	Q01118	1682 aa		32.59	■■■□□ 2.81
STIP1-208	ENST00000540501	PDE3A	Q14432	1141 aa		32.59	■■■□□ 2.81
STIP1-208	ENST00000540501	PXDNL	A1KZ92	1463 aa		32.59	■■■□□ 2.81
STIP1-208	ENST00000540501	MSH5	O43196	834 aa		32.58	■■■□□ 2.81
STIP1-208	ENST00000540501	DZIP1L	Q8IYY4	767 aa	Known RBP	32.58	■■■□□ 2.81
STIP1-208	ENST00000540501	SLC16A10	Q8TF71	515 aa		32.58	■■■□□ 2.81
STIP1-208	ENST00000540501	TCIRG1	Q13488	830 aa		32.57	■■■□□ 2.8
STIP1-208	ENST00000540501	USPL1	Q5W0Q7	1092 aa		32.57	■■■□□ 2.8
STIP1-208	ENST00000540501	CCT4	P50991	539 aa	Known RBP	32.56	■■■□□ 2.8
STIP1-208	ENST00000540501	SMIM5	Q71RC9	77 aa		32.56	■■■□□ 2.8
STIP1-208	ENST00000540501	ABCC4	O15439	1325 aa		32.55	■■■□□ 2.8
STIP1-208	ENST00000540501	ATP10D	Q9P241	1426 aa		32.55	■■■□□ 2.8
STIP1-208	ENST00000540501		F6X3S4	739 aa		32.55	■■■□□ 2.8
STIP1-208	ENST00000540501	TRIM28	Q13263	835 aa	Known RBP	32.54	■■■□□ 2.8
STIP1-208	ENST00000540501	HLF	Q16534	295 aa		32.54	■■■□□ 2.8
STIP1-208	ENST00000540501	SLC4A10	Q6U841	1118 aa		32.54	■■■□□ 2.8
STIP1-208	ENST00000540501	NLGN1	Q8N2Q7	840 aa		32.54	■■■□□ 2.8
STIP1-208	ENST00000540501	LINS1	Q8NG48	757 aa		32.54	■■■□□ 2.8
STIP1-208	ENST00000540501	SRP68	Q9UHB9	627 aa	Known RBP	32.54	■■■□□ 2.8
STIP1-208	ENST00000540501	ANKRD36C	Q5JPF3	1778 aa		32.54	■■■□□ 2.8
STIP1-208	ENST00000540501	PLIN1	O60240	522 aa		32.53	■■■□□ 2.8
STIP1-208	ENST00000540501	MYD88	Q99836	296 aa		32.53	■■■□□ 2.8
STIP1-208	ENST00000540501	ALDH1L1	O75891	902 aa		32.52	■■■□□ 2.8
STIP1-208	ENST00000540501	GYS1	P13807	737 aa		32.52	■■■□□ 2.8
STIP1-208	ENST00000540501	SRCIN1	Q9C0H9	1055 aa		32.52	■■■□□ 2.8
STIP1-208	ENST00000540501	IBTK	Q9P2D0	1353 aa	Predicted RBP	32.52	■■■□□ 2.8
STIP1-208	ENST00000540501	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.51	■■■□□ 2.79
STIP1-208	ENST00000540501	PARP10	Q53GL7	1025 aa		32.51	■■■□□ 2.79
STIP1-208	ENST00000540501	INTS3	Q68E01	1043 aa	Known RBP	32.51	■■■□□ 2.79
STIP1-208	ENST00000540501	CLUAP1	Q96AJ1	413 aa		32.51	■■■□□ 2.79
STIP1-208	ENST00000540501	BCL2L12	Q9HB09	334 aa		32.51	■■■□□ 2.79
STIP1-208	ENST00000540501	BEND3	Q5T5X7	828 aa		32.5	■■■□□ 2.79
STIP1-208	ENST00000540501	ZNF34	Q8IZ26	560 aa		32.5	■■■□□ 2.79
STIP1-208	ENST00000540501	CCDC191	Q8NCU4	936 aa		32.5	■■■□□ 2.79
STIP1-208	ENST00000540501	ISCA1	Q9BUE6	129 aa		32.5	■■■□□ 2.79
STIP1-208	ENST00000540501	R3HDM1	Q15032	1099 aa	Known RBP	32.49	■■■□□ 2.79
STIP1-208	ENST00000540501	SETDB2	Q96T68	719 aa		32.48	■■■□□ 2.79
STIP1-208	ENST00000540501	CHMP4B	Q9H444	224 aa	Known RBP	32.48	■■■□□ 2.79
STIP1-208	ENST00000540501	NIP7	Q9Y221	180 aa	Known RBP eCLIP	32.48	■■■□□ 2.79
STIP1-208	ENST00000540501	FKBP8	Q14318	412 aa		32.46	■■■□□ 2.79
STIP1-208	ENST00000540501	AFDN	P55196	1824 aa	Known RBP	32.46	■■■□□ 2.79
STIP1-208	ENST00000540501	NEURL1B	A8MQ27	555 aa		32.45	■■■□□ 2.79
STIP1-208	ENST00000540501	CWC25	Q9NXE8	425 aa	Predicted RBP	32.45	■■■□□ 2.79
STIP1-208	ENST00000540501	ATP5J2-PTCD1	G3V325	749 aa		32.44	■■■□□ 2.78
STIP1-208	ENST00000540501	IGKV5-2	P06315	115 aa		32.44	■■■□□ 2.78
STIP1-208	ENST00000540501	TBC1D9B	Q66K14	1250 aa		32.44	■■■□□ 2.78
STIP1-208	ENST00000540501	PPP1R42	Q7Z4L9	355 aa		32.44	■■■□□ 2.78
STIP1-208	ENST00000540501	TMEM57	Q8N5G2	664 aa		32.44	■■■□□ 2.78
STIP1-208	ENST00000540501	TNN	Q9UQP3	1299 aa		32.44	■■■□□ 2.78
STIP1-208	ENST00000540501	NLRP10	Q86W26	655 aa		32.43	■■■□□ 2.78
STIP1-208	ENST00000540501	PANK1	Q8TE04	598 aa		32.43	■■■□□ 2.78
STIP1-208	ENST00000540501	LRP5	O75197	1615 aa		32.43	■■■□□ 2.78
STIP1-208	ENST00000540501	CASZ1	Q86V15	1759 aa		32.42	■■■□□ 2.78
STIP1-208	ENST00000540501	RLBP1	P12271	317 aa		32.42	■■■□□ 2.78
STIP1-208	ENST00000540501	GPT	P24298	496 aa		32.42	■■■□□ 2.78
STIP1-208	ENST00000540501	TM4SF1	P30408	202 aa		32.42	■■■□□ 2.78
STIP1-208	ENST00000540501	NYX	Q9GZU5	481 aa		32.42	■■■□□ 2.78
STIP1-208	ENST00000540501	DDX19B	Q9UMR2	479 aa		32.42	■■■□□ 2.78
STIP1-208	ENST00000540501	HDAC5	Q9UQL6	1122 aa		32.42	■■■□□ 2.78
STIP1-208	ENST00000540501	CARMIL3	Q8ND23	1372 aa		32.42	■■■□□ 2.78
STIP1-208	ENST00000540501	MVP	Q14764	893 aa	Known RBP	32.41	■■■□□ 2.78
STIP1-208	ENST00000540501	NFIX	Q14938	502 aa		32.41	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms