RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 CLUAP1Q96AJ1 413 aa24.1■■□□□ 1.45
TNFRSF1A-213ENST00000540022 AK7Q96M32 723 aa24.1■■□□□ 1.45
TNFRSF1A-213ENST00000540022 EIF5P55010 431 aaKnown RBP24.09■■□□□ 1.45
TNFRSF1A-213ENST00000540022 API5Q9BZZ5 524 aaKnown RBP24.09■■□□□ 1.45
TNFRSF1A-213ENST00000540022 MYH14Q7Z406 1995 aaKnown RBP24.08■■□□□ 1.45
TNFRSF1A-213ENST00000540022 TTLL7Q6ZT98 887 aa24.08■■□□□ 1.45
TNFRSF1A-213ENST00000540022 F6X3S4 739 aa24.07■■□□□ 1.44
TNFRSF1A-213ENST00000540022 RLBP1P12271 317 aa24.07■■□□□ 1.44
TNFRSF1A-213ENST00000540022 RPS6KA4O75676 772 aa24.06■■□□□ 1.44
TNFRSF1A-213ENST00000540022 PHF14O94880 888 aa24.06■■□□□ 1.44
TNFRSF1A-213ENST00000540022 IRX6P78412 446 aaPredicted RBP24.06■■□□□ 1.44
TNFRSF1A-213ENST00000540022 DZIP1LQ8IYY4 767 aaKnown RBP24.06■■□□□ 1.44
TNFRSF1A-213ENST00000540022 PANK1Q8TE04 598 aa24.06■■□□□ 1.44
TNFRSF1A-213ENST00000540022 SLC16A10Q8TF71 515 aa24.06■■□□□ 1.44
TNFRSF1A-213ENST00000540022 ADCY9O60503 1353 aa24.06■■□□□ 1.44
TNFRSF1A-213ENST00000540022 PI4KAP2A4QPH2 592 aa24.05■■□□□ 1.44
TNFRSF1A-213ENST00000540022 PDE3AQ14432 1141 aa24.05■■□□□ 1.44
TNFRSF1A-213ENST00000540022 PI4KAP1Q8N8J0 262 aa24.05■■□□□ 1.44
TNFRSF1A-213ENST00000540022 DDX58O95786 925 aaKnown RBP24.05■■□□□ 1.44
TNFRSF1A-213ENST00000540022 KSR2Q6VAB6 950 aa24.05■■□□□ 1.44
TNFRSF1A-213ENST00000540022 ANKRD13DQ6ZTN6 518 aa24.05■■□□□ 1.44
TNFRSF1A-213ENST00000540022 ABCC4O15439 1325 aa24.04■■□□□ 1.44
TNFRSF1A-213ENST00000540022 HMGB2P26583 209 aaKnown RBP24.04■■□□□ 1.44
TNFRSF1A-213ENST00000540022 COL23A1Q86Y22 540 aaPredicted RBP24.04■■□□□ 1.44
TNFRSF1A-213ENST00000540022 FTSJ3Q8IY81 847 aaKnown RBP24.04■■□□□ 1.44
TNFRSF1A-213ENST00000540022 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.03■■□□□ 1.44
TNFRSF1A-213ENST00000540022 NPM2Q86SE8 214 aaKnown RBP24.03■■□□□ 1.44
TNFRSF1A-213ENST00000540022 MAP3K2Q9Y2U5 619 aa24.03■■□□□ 1.44
TNFRSF1A-213ENST00000540022 RTCBQ9Y3I0 505 aaKnown RBP24.03■■□□□ 1.44
TNFRSF1A-213ENST00000540022 COL15A1P39059 1388 aa24.03■■□□□ 1.44
TNFRSF1A-213ENST00000540022 MS4A1P11836 297 aa24.02■■□□□ 1.44
TNFRSF1A-213ENST00000540022 RIC3Q7Z5B4 369 aa24.02■■□□□ 1.44
TNFRSF1A-213ENST00000540022 PLBD2Q8NHP8 589 aa24.02■■□□□ 1.44
TNFRSF1A-213ENST00000540022 DNAAF4Q8WXU2 420 aa24.02■■□□□ 1.44
TNFRSF1A-213ENST00000540022 ARXQ96QS3 562 aa24.02■■□□□ 1.44
TNFRSF1A-213ENST00000540022 TBC1D2BQ9UPU7 963 aa24.02■■□□□ 1.44
TNFRSF1A-213ENST00000540022 DZIP3Q86Y13 1208 aaKnown RBP24.01■■□□□ 1.43
TNFRSF1A-213ENST00000540022 TMEM57Q8N5G2 664 aa24.01■■□□□ 1.43
TNFRSF1A-213ENST00000540022 ARHGEF1Q92888 912 aaKnown RBP24.01■■□□□ 1.43
TNFRSF1A-213ENST00000540022 ZBTB3Q9H5J0 574 aa24.01■■□□□ 1.43
TNFRSF1A-213ENST00000540022 CACNA1FO60840 1977 aa24.01■■□□□ 1.43
TNFRSF1A-213ENST00000540022 SLC4A10Q6U841 1118 aa24■■□□□ 1.43
TNFRSF1A-213ENST00000540022 KIF6Q6ZMV9 814 aa24■■□□□ 1.43
TNFRSF1A-213ENST00000540022 SSFA2P28290 1259 aa24■■□□□ 1.43
TNFRSF1A-213ENST00000540022 COG6Q9Y2V7 657 aa24■■□□□ 1.43
TNFRSF1A-213ENST00000540022 MAP3K15Q6ZN16 1313 aa23.99■■□□□ 1.43
TNFRSF1A-213ENST00000540022 A0A087WZG4 1122 aa23.98■■□□□ 1.43
TNFRSF1A-213ENST00000540022 NEFLP07196 543 aa23.98■■□□□ 1.43
TNFRSF1A-213ENST00000540022 TRAPPC3LQ5T215 181 aa23.98■■□□□ 1.43
TNFRSF1A-213ENST00000540022 INTS3Q68E01 1043 aaKnown RBP23.98■■□□□ 1.43
TNFRSF1A-213ENST00000540022 CRBNQ96SW2 442 aa23.98■■□□□ 1.43
TNFRSF1A-213ENST00000540022 METTL22Q9BUU2 404 aaPredicted RBP23.98■■□□□ 1.43
TNFRSF1A-213ENST00000540022 FHDC1Q9C0D6 1143 aaPredicted RBP23.98■■□□□ 1.43
TNFRSF1A-213ENST00000540022 MSH5O43196 834 aa23.97■■□□□ 1.43
TNFRSF1A-213ENST00000540022 SRP68Q9UHB9 627 aaKnown RBP23.97■■□□□ 1.43
TNFRSF1A-213ENST00000540022 CAMTA2O94983 1202 aa23.96■■□□□ 1.43
TNFRSF1A-213ENST00000540022 BEND3Q5T5X7 828 aa23.96■■□□□ 1.43
TNFRSF1A-213ENST00000540022 FLAD1Q8NFF5 587 aa23.96■■□□□ 1.43
TNFRSF1A-213ENST00000540022 ERVV-1B6SEH8 477 aa23.95■■□□□ 1.43
TNFRSF1A-213ENST00000540022 ADRA2BP18089 450 aa23.95■■□□□ 1.43
TNFRSF1A-213ENST00000540022 MVPQ14764 893 aaKnown RBP23.95■■□□□ 1.43
TNFRSF1A-213ENST00000540022 HLFQ16534 295 aa23.95■■□□□ 1.43
TNFRSF1A-213ENST00000540022 ITPRIPQ8IWB1 547 aa23.95■■□□□ 1.43
TNFRSF1A-213ENST00000540022 SYT17Q9BSW7 474 aa23.95■■□□□ 1.43
TNFRSF1A-213ENST00000540022 PXDNLA1KZ92 1463 aa23.95■■□□□ 1.42
TNFRSF1A-213ENST00000540022 UTRNP46939 3433 aa23.95■■□□□ 1.42
TNFRSF1A-213ENST00000540022 CCT4P50991 539 aaKnown RBP23.94■■□□□ 1.42
TNFRSF1A-213ENST00000540022 GIGYF2Q6Y7W6 1299 aaKnown RBP23.94■■□□□ 1.42
TNFRSF1A-213ENST00000540022 MYD88Q99836 296 aa23.94■■□□□ 1.42
TNFRSF1A-213ENST00000540022 ATP10DQ9P241 1426 aa23.94■■□□□ 1.42
TNFRSF1A-213ENST00000540022 POLD1P28340 1107 aa23.94■■□□□ 1.42
TNFRSF1A-213ENST00000540022 FKBP8Q14318 412 aa23.94■■□□□ 1.42
TNFRSF1A-213ENST00000540022 EXOC6Q8TAG9 804 aa23.94■■□□□ 1.42
TNFRSF1A-213ENST00000540022 SRCIN1Q9C0H9 1055 aa23.94■■□□□ 1.42
TNFRSF1A-213ENST00000540022 NARFQ9UHQ1 456 aa23.94■■□□□ 1.42
TNFRSF1A-213ENST00000540022 IGKV5-2P06315 115 aa23.93■■□□□ 1.42
TNFRSF1A-213ENST00000540022 RFC4P35249 363 aa23.93■■□□□ 1.42
TNFRSF1A-213ENST00000540022 LINS1Q8NG48 757 aa23.93■■□□□ 1.42
TNFRSF1A-213ENST00000540022 C4AP0C0L4 1744 aa23.92■■□□□ 1.42
TNFRSF1A-213ENST00000540022 NEXNQ0ZGT2 675 aa23.92■■□□□ 1.42
TNFRSF1A-213ENST00000540022 CWF19L2Q2TBE0 894 aaKnown RBP23.92■■□□□ 1.42
TNFRSF1A-213ENST00000540022 ATP5J2-PTCD1G3V325 749 aa23.91■■□□□ 1.42
TNFRSF1A-213ENST00000540022 TCIRG1Q13488 830 aa23.91■■□□□ 1.42
TNFRSF1A-213ENST00000540022 USPL1Q5W0Q7 1092 aa23.91■■□□□ 1.42
TNFRSF1A-213ENST00000540022 MSL1Q68DK7 614 aa23.91■■□□□ 1.42
TNFRSF1A-213ENST00000540022 BCL2L12Q9HB09 334 aa23.91■■□□□ 1.42
TNFRSF1A-213ENST00000540022 USP42Q9H9J4 1324 aaKnown RBP23.91■■□□□ 1.42
TNFRSF1A-213ENST00000540022 DDX19BQ9UMR2 479 aa23.9■■□□□ 1.42
TNFRSF1A-213ENST00000540022 ARFGEF2Q9Y6D5 1785 aa23.9■■□□□ 1.42
TNFRSF1A-213ENST00000540022 NEURL1BA8MQ27 555 aa23.89■■□□□ 1.42
TNFRSF1A-213ENST00000540022 ZPR1O75312 459 aa23.89■■□□□ 1.42
TNFRSF1A-213ENST00000540022 ALDH1L1O75891 902 aa23.89■■□□□ 1.42
TNFRSF1A-213ENST00000540022 ISCA1Q9BUE6 129 aa23.89■■□□□ 1.42
TNFRSF1A-213ENST00000540022 GOLGB1Q14789 3259 aaKnown RBP23.89■■□□□ 1.42
TNFRSF1A-213ENST00000540022 ZBTB7BO15156 539 aaPredicted RBP23.89■■□□□ 1.41
TNFRSF1A-213ENST00000540022 GYS1P13807 737 aa23.89■■□□□ 1.41
TNFRSF1A-213ENST00000540022 HSP90AB3PQ58FF7 597 aa23.89■■□□□ 1.41
TNFRSF1A-213ENST00000540022 CLEC4GQ6UXB4 293 aa23.88■■□□□ 1.41
TNFRSF1A-213ENST00000540022 RGL2O15211 777 aa23.87■■□□□ 1.41
TNFRSF1A-213ENST00000540022 ZNF652Q9Y2D9 606 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms