RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 LMOD3Q0VAK6 560 aa25.06■■□□□ 1.6
TNFRSF1A-212ENST00000539372 NBPF5PQ86XG9 351 aaPredicted RBP25.06■■□□□ 1.6
TNFRSF1A-212ENST00000539372 ADAMTS8Q9UP79 889 aa25.06■■□□□ 1.6
TNFRSF1A-212ENST00000539372 RASSF7Q02833 373 aa25.05■■□□□ 1.6
TNFRSF1A-212ENST00000539372 HLFQ16534 295 aa25.05■■□□□ 1.6
TNFRSF1A-212ENST00000539372 RUNDC1Q96C34 613 aa25.05■■□□□ 1.6
TNFRSF1A-212ENST00000539372 RNF181Q9P0P0 153 aa25.05■■□□□ 1.6
TNFRSF1A-212ENST00000539372 NIP7Q9Y221 180 aaKnown RBP eCLIP25.05■■□□□ 1.6
TNFRSF1A-212ENST00000539372 MYL6BP14649 208 aa25.04■■□□□ 1.6
TNFRSF1A-212ENST00000539372 FAM177BA6PVY3 158 aa25.03■■□□□ 1.6
TNFRSF1A-212ENST00000539372 PDZRN3Q9UPQ7 1066 aa25.03■■□□□ 1.6
TNFRSF1A-212ENST00000539372 COL11A2P13942 1736 aaPredicted RBP25.03■■□□□ 1.6
TNFRSF1A-212ENST00000539372 ZNF219Q9P2Y4 722 aaPredicted RBP25.02■■□□□ 1.6
TNFRSF1A-212ENST00000539372 KIF3CO14782 793 aa25.01■■□□□ 1.59
TNFRSF1A-212ENST00000539372 TTLL7Q6ZT98 887 aa25.01■■□□□ 1.59
TNFRSF1A-212ENST00000539372 RGL2O15211 777 aa25■■□□□ 1.59
TNFRSF1A-212ENST00000539372 ZEB1P37275 1124 aaPredicted RBP25■■□□□ 1.59
TNFRSF1A-212ENST00000539372 KIF6Q6ZMV9 814 aa25■■□□□ 1.59
TNFRSF1A-212ENST00000539372 TRIM35Q9UPQ4 493 aa25■■□□□ 1.59
TNFRSF1A-212ENST00000539372 EIF2S2P20042 333 aaKnown RBP24.99■■□□□ 1.59
TNFRSF1A-212ENST00000539372 MAP3K15Q6ZN16 1313 aa24.99■■□□□ 1.59
TNFRSF1A-212ENST00000539372 BABAM1Q9NWV8 329 aa24.99■■□□□ 1.59
TNFRSF1A-212ENST00000539372 LAS1LQ9Y4W2 734 aaKnown RBP24.99■■□□□ 1.59
TNFRSF1A-212ENST00000539372 C21orf2O43822 256 aa24.98■■□□□ 1.59
TNFRSF1A-212ENST00000539372 SRGNP10124 158 aa24.98■■□□□ 1.59
TNFRSF1A-212ENST00000539372 PRELPP51888 382 aa24.98■■□□□ 1.59
TNFRSF1A-212ENST00000539372 TPTE2Q6XPS3 522 aa24.98■■□□□ 1.59
TNFRSF1A-212ENST00000539372 NMRK2Q9NPI5 230 aa24.98■■□□□ 1.59
TNFRSF1A-212ENST00000539372 ERVV-1B6SEH8 477 aa24.97■■□□□ 1.59
TNFRSF1A-212ENST00000539372 STYK1Q6J9G0 422 aa24.97■■□□□ 1.59
TNFRSF1A-212ENST00000539372 ZBTB3Q9H5J0 574 aa24.97■■□□□ 1.59
TNFRSF1A-212ENST00000539372 SBF1O95248 1867 aa24.96■■□□□ 1.59
TNFRSF1A-212ENST00000539372 NFKBIEO00221 500 aa24.96■■□□□ 1.59
TNFRSF1A-212ENST00000539372 CNKSR1Q969H4 720 aa24.96■■□□□ 1.59
TNFRSF1A-212ENST00000539372 MASTLQ96GX5 879 aa24.96■■□□□ 1.59
TNFRSF1A-212ENST00000539372 ERBB4Q15303 1308 aa24.95■■□□□ 1.58
TNFRSF1A-212ENST00000539372 LMNB1P20700 586 aa24.95■■□□□ 1.58
TNFRSF1A-212ENST00000539372 NECTIN2Q92692 538 aa24.95■■□□□ 1.58
TNFRSF1A-212ENST00000539372 CHL1O00533 1208 aa24.94■■□□□ 1.58
TNFRSF1A-212ENST00000539372 ANXA1P04083 346 aa24.94■■□□□ 1.58
TNFRSF1A-212ENST00000539372 GPTP24298 496 aa24.94■■□□□ 1.58
TNFRSF1A-212ENST00000539372 GTF2E1P29083 439 aaPredicted RBP24.94■■□□□ 1.58
TNFRSF1A-212ENST00000539372 PDIA6Q15084 440 aa24.94■■□□□ 1.58
TNFRSF1A-212ENST00000539372 KRT24Q2M2I5 525 aa24.94■■□□□ 1.58
TNFRSF1A-212ENST00000539372 PROSER3Q2NL68 480 aa24.94■■□□□ 1.58
TNFRSF1A-212ENST00000539372 PRPF40BQ6NWY9 871 aaKnown RBP24.94■■□□□ 1.58
TNFRSF1A-212ENST00000539372 LRP10Q7Z4F1 713 aa24.92■■□□□ 1.58
TNFRSF1A-212ENST00000539372 NUTM1Q86Y26 1132 aa24.92■■□□□ 1.58
TNFRSF1A-212ENST00000539372 NUP98P52948 1817 aa24.91■■□□□ 1.58
TNFRSF1A-212ENST00000539372 SLX4Q8IY92 1834 aa24.91■■□□□ 1.58
TNFRSF1A-212ENST00000539372 KDM2BQ8NHM5 1336 aa24.91■■□□□ 1.58
TNFRSF1A-212ENST00000539372 NPR1P16066 1061 aa24.91■■□□□ 1.58
TNFRSF1A-212ENST00000539372 UBN2Q6ZU65 1347 aa24.9■■□□□ 1.58
TNFRSF1A-212ENST00000539372 CACNA1SQ13698 1873 aa24.9■■□□□ 1.58
TNFRSF1A-212ENST00000539372 KLRG2A4D1S0 409 aaPredicted RBP24.9■■□□□ 1.58
TNFRSF1A-212ENST00000539372 APAF1O14727 1248 aa24.9■■□□□ 1.58
TNFRSF1A-212ENST00000539372 NYXQ9GZU5 481 aa24.9■■□□□ 1.58
TNFRSF1A-212ENST00000539372 ABCC12Q96J65 1359 aa24.9■■□□□ 1.58
TNFRSF1A-212ENST00000539372 ERFEQ4G0M1 354 aa24.89■■□□□ 1.58
TNFRSF1A-212ENST00000539372 CCDC184Q52MB2 194 aa24.88■■□□□ 1.57
TNFRSF1A-212ENST00000539372 SUSD4Q5VX71 490 aa24.88■■□□□ 1.57
TNFRSF1A-212ENST00000539372 GIGYF2Q6Y7W6 1299 aaKnown RBP24.88■■□□□ 1.57
TNFRSF1A-212ENST00000539372 ZNF34Q8IZ26 560 aa24.88■■□□□ 1.57
TNFRSF1A-212ENST00000539372 RRAGCQ9HB90 399 aa24.88■■□□□ 1.57
TNFRSF1A-212ENST00000539372 ZC3H4Q9UPT8 1303 aaKnown RBP24.87■■□□□ 1.57
TNFRSF1A-212ENST00000539372 TOMM70O94826 608 aa24.87■■□□□ 1.57
TNFRSF1A-212ENST00000539372 AIMP1Q12904 312 aaKnown RBP24.87■■□□□ 1.57
TNFRSF1A-212ENST00000539372 TAOK3Q9H2K8 898 aa24.87■■□□□ 1.57
TNFRSF1A-212ENST00000539372 ARFGEF2Q9Y6D5 1785 aa24.86■■□□□ 1.57
TNFRSF1A-212ENST00000539372 TNRC6CQ9HCJ0 1690 aaKnown RBP24.86■■□□□ 1.57
TNFRSF1A-212ENST00000539372 HSPA6P17066 643 aa24.86■■□□□ 1.57
TNFRSF1A-212ENST00000539372 COPS6Q7L5N1 327 aa24.86■■□□□ 1.57
TNFRSF1A-212ENST00000539372 XAGE3Q8WTP9 111 aa24.86■■□□□ 1.57
TNFRSF1A-212ENST00000539372 CFAP44Q96MT7 982 aa24.86■■□□□ 1.57
TNFRSF1A-212ENST00000539372 FER1L6Q2WGJ9 1857 aa24.85■■□□□ 1.57
TNFRSF1A-212ENST00000539372 CCDC88AQ3V6T2 1871 aa24.85■■□□□ 1.57
TNFRSF1A-212ENST00000539372 SOGA3Q5TF21 947 aa24.85■■□□□ 1.57
TNFRSF1A-212ENST00000539372 C16orf71Q8IYS4 520 aaPredicted RBP24.85■■□□□ 1.57
TNFRSF1A-212ENST00000539372 C7orf43Q8WVR3 580 aa24.85■■□□□ 1.57
TNFRSF1A-212ENST00000539372 TIAM2Q8IVF5 1701 aa24.85■■□□□ 1.57
TNFRSF1A-212ENST00000539372 ZNF316A6NFI3 1004 aaPredicted RBP24.84■■□□□ 1.57
TNFRSF1A-212ENST00000539372 OLFM4Q6UX06 510 aa24.84■■□□□ 1.57
TNFRSF1A-212ENST00000539372 DDX21Q9NR30 783 aaKnown RBP eCLIP24.84■■□□□ 1.57
TNFRSF1A-212ENST00000539372 MBIPQ9NS73 344 aa24.84■■□□□ 1.57
TNFRSF1A-212ENST00000539372 CHPF2Q9P2E5 772 aa24.84■■□□□ 1.57
TNFRSF1A-212ENST00000539372 LTBP3Q9NS15 1303 aa24.84■■□□□ 1.57
TNFRSF1A-212ENST00000539372 IBTKQ9P2D0 1353 aaPredicted RBP24.83■■□□□ 1.57
TNFRSF1A-212ENST00000539372 GLTPD2A6NH11 291 aa24.83■■□□□ 1.57
TNFRSF1A-212ENST00000539372 NTSR2O95665 410 aa24.83■■□□□ 1.57
TNFRSF1A-212ENST00000539372 HDGFL1Q5TGJ6 251 aa24.83■■□□□ 1.57
TNFRSF1A-212ENST00000539372 CRY2Q49AN0 593 aa24.82■■□□□ 1.56
TNFRSF1A-212ENST00000539372 CCDC93Q567U6 631 aa24.82■■□□□ 1.56
TNFRSF1A-212ENST00000539372 PPP1R42Q7Z4L9 355 aa24.82■■□□□ 1.56
TNFRSF1A-212ENST00000539372 ALDH1B1P30837 517 aa24.81■■□□□ 1.56
TNFRSF1A-212ENST00000539372 PARP10Q53GL7 1025 aa24.81■■□□□ 1.56
TNFRSF1A-212ENST00000539372 DUSP27Q5VZP5 1158 aa24.81■■□□□ 1.56
TNFRSF1A-212ENST00000539372 HOXB7P09629 217 aa24.8■■□□□ 1.56
TNFRSF1A-212ENST00000539372 ZNF853P0CG23 659 aa24.8■■□□□ 1.56
TNFRSF1A-212ENST00000539372 RBM46Q8TBY0 533 aaKnown RBP24.8■■□□□ 1.56
TNFRSF1A-212ENST00000539372 RPGRQ92834 1020 aaKnown RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms