RNA–Protein interactions for RNA: ENST00000539365.1

PTPN6-213, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 907 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-213ENST00000539365 GTF2E1P29083 439 aaPredicted RBP17.99■□□□□ 0.47
PTPN6-213ENST00000539365 LAS1LQ9Y4W2 734 aaKnown RBP17.99■□□□□ 0.47
PTPN6-213ENST00000539365 ADCY9O60503 1353 aa17.99■□□□□ 0.47
PTPN6-213ENST00000539365 KIAA1551Q9HCM1 1747 aa17.98■□□□□ 0.47
PTPN6-213ENST00000539365 DLG5Q8TDM6 1919 aa17.98■□□□□ 0.47
PTPN6-213ENST00000539365 CALD1Q05682 793 aaKnown RBP17.98■□□□□ 0.47
PTPN6-213ENST00000539365 C9orf131Q5VYM1 1079 aa17.98■□□□□ 0.47
PTPN6-213ENST00000539365 CCDC24Q8N4L8 307 aa17.98■□□□□ 0.47
PTPN6-213ENST00000539365 ZNF526Q8TF50 670 aaPredicted RBP17.98■□□□□ 0.47
PTPN6-213ENST00000539365 CNKSR1Q969H4 720 aa17.98■□□□□ 0.47
PTPN6-213ENST00000539365 MAP3K15Q6ZN16 1313 aa17.98■□□□□ 0.47
PTPN6-213ENST00000539365 HLFQ16534 295 aa17.97■□□□□ 0.47
PTPN6-213ENST00000539365 STYK1Q6J9G0 422 aa17.97■□□□□ 0.47
PTPN6-213ENST00000539365 NYXQ9GZU5 481 aa17.97■□□□□ 0.47
PTPN6-213ENST00000539365 NRXN2Q9P2S2 1712 aa17.97■□□□□ 0.47
PTPN6-213ENST00000539365 APAF1O14727 1248 aa17.96■□□□□ 0.47
PTPN6-213ENST00000539365 ANP32CO43423 234 aa17.96■□□□□ 0.47
PTPN6-213ENST00000539365 MASTLQ96GX5 879 aa17.96■□□□□ 0.47
PTPN6-213ENST00000539365 CFAP44Q96MT7 982 aa17.96■□□□□ 0.47
PTPN6-213ENST00000539365 SRGNP10124 158 aa17.95■□□□□ 0.46
PTPN6-213ENST00000539365 TTLL7Q6ZT98 887 aa17.95■□□□□ 0.46
PTPN6-213ENST00000539365 RNF181Q9P0P0 153 aa17.95■□□□□ 0.46
PTPN6-213ENST00000539365 SCN7AQ01118 1682 aa17.94■□□□□ 0.46
PTPN6-213ENST00000539365 AFDNP55196 1824 aaKnown RBP17.94■□□□□ 0.46
PTPN6-213ENST00000539365 FAM177BA6PVY3 158 aa17.94■□□□□ 0.46
PTPN6-213ENST00000539365 SOGA3Q5TF21 947 aa17.94■□□□□ 0.46
PTPN6-213ENST00000539365 KDM3BQ7LBC6 1761 aa17.94■□□□□ 0.46
PTPN6-213ENST00000539365 KLRG2A4D1S0 409 aaPredicted RBP17.93■□□□□ 0.46
PTPN6-213ENST00000539365 HOXB7P09629 217 aa17.93■□□□□ 0.46
PTPN6-213ENST00000539365 NPR1P16066 1061 aa17.93■□□□□ 0.46
PTPN6-213ENST00000539365 LMNB1P20700 586 aa17.93■□□□□ 0.46
PTPN6-213ENST00000539365 GNAI1P63096 354 aa17.93■□□□□ 0.46
PTPN6-213ENST00000539365 PDIA6Q15084 440 aa17.93■□□□□ 0.46
PTPN6-213ENST00000539365 GIGYF2Q6Y7W6 1299 aaKnown RBP17.93■□□□□ 0.46
PTPN6-213ENST00000539365 ZBTB3Q9H5J0 574 aa17.93■□□□□ 0.46
PTPN6-213ENST00000539365 GOLGB1Q14789 3259 aaKnown RBP17.92■□□□□ 0.46
PTPN6-213ENST00000539365 C21orf2O43822 256 aa17.92■□□□□ 0.46
PTPN6-213ENST00000539365 DDX21Q9NR30 783 aaKnown RBP eCLIP17.92■□□□□ 0.46
PTPN6-213ENST00000539365 BRCA1P38398 1863 aaKnown RBP17.91■□□□□ 0.46
PTPN6-213ENST00000539365 ALDH1B1P30837 517 aa17.91■□□□□ 0.46
PTPN6-213ENST00000539365 PARP10Q53GL7 1025 aa17.91■□□□□ 0.46
PTPN6-213ENST00000539365 HSP90AB3PQ58FF7 597 aa17.91■□□□□ 0.46
PTPN6-213ENST00000539365 PPP1R42Q7Z4L9 355 aa17.91■□□□□ 0.46
PTPN6-213ENST00000539365 ZNF34Q8IZ26 560 aa17.91■□□□□ 0.46
PTPN6-213ENST00000539365 CHMP4AQ9BY43 222 aa17.91■□□□□ 0.46
PTPN6-213ENST00000539365 IFT57Q9NWB7 429 aa17.91■□□□□ 0.46
PTPN6-213ENST00000539365 KDM2BQ8NHM5 1336 aa17.91■□□□□ 0.46
PTPN6-213ENST00000539365 ZC3H4Q9UPT8 1303 aaKnown RBP17.91■□□□□ 0.46
PTPN6-213ENST00000539365 ARFGEF1Q9Y6D6 1849 aa17.91■□□□□ 0.46
PTPN6-213ENST00000539365 GPTP24298 496 aa17.9■□□□□ 0.46
PTPN6-213ENST00000539365 COPS6Q7L5N1 327 aa17.9■□□□□ 0.46
PTPN6-213ENST00000539365 NECTIN2Q92692 538 aa17.9■□□□□ 0.46
PTPN6-213ENST00000539365 ZNF219Q9P2Y4 722 aaPredicted RBP17.9■□□□□ 0.46
PTPN6-213ENST00000539365 AIMP1Q12904 312 aaKnown RBP17.89■□□□□ 0.45
PTPN6-213ENST00000539365 HDGFL1Q5TGJ6 251 aa17.89■□□□□ 0.45
PTPN6-213ENST00000539365 PRPF40BQ6NWY9 871 aaKnown RBP17.89■□□□□ 0.45
PTPN6-213ENST00000539365 LRP10Q7Z4F1 713 aa17.89■□□□□ 0.45
PTPN6-213ENST00000539365 MBIPQ9NS73 344 aa17.89■□□□□ 0.45
PTPN6-213ENST00000539365 DBF4Q9UBU7 674 aaPredicted RBP17.89■□□□□ 0.45
PTPN6-213ENST00000539365 LAMB4A4D0S4 1761 aa17.89■□□□□ 0.45
PTPN6-213ENST00000539365 SENP3-EIF4A1A0A087X0R7 540 aa17.88■□□□□ 0.45
PTPN6-213ENST00000539365 ANXA1P04083 346 aa17.88■□□□□ 0.45
PTPN6-213ENST00000539365 ZNF853P0CG23 659 aa17.88■□□□□ 0.45
PTPN6-213ENST00000539365 RASSF7Q02833 373 aa17.88■□□□□ 0.45
PTPN6-213ENST00000539365 SUSD4Q5VX71 490 aa17.88■□□□□ 0.45
PTPN6-213ENST00000539365 DUSP27Q5VZP5 1158 aa17.88■□□□□ 0.45
PTPN6-213ENST00000539365 XAGE3Q8WTP9 111 aa17.88■□□□□ 0.45
PTPN6-213ENST00000539365 MRS2Q9HD23 443 aa17.88■□□□□ 0.45
PTPN6-213ENST00000539365 BCORQ6W2J9 1755 aa17.88■□□□□ 0.45
PTPN6-213ENST00000539365 NFKBIEO00221 500 aa17.87■□□□□ 0.45
PTPN6-213ENST00000539365 KIF3CO14782 793 aa17.87■□□□□ 0.45
PTPN6-213ENST00000539365 KRT24Q2M2I5 525 aa17.87■□□□□ 0.45
PTPN6-213ENST00000539365 PROSER3Q2NL68 480 aa17.87■□□□□ 0.45
PTPN6-213ENST00000539365 ERFEQ4G0M1 354 aa17.87■□□□□ 0.45
PTPN6-213ENST00000539365 CCDC184Q52MB2 194 aa17.87■□□□□ 0.45
PTPN6-213ENST00000539365 NUTM1Q86Y26 1132 aa17.87■□□□□ 0.45
PTPN6-213ENST00000539365 HYPKQ9NX55 129 aa17.87■□□□□ 0.45
PTPN6-213ENST00000539365 IBTKQ9P2D0 1353 aaPredicted RBP17.87■□□□□ 0.45
PTPN6-213ENST00000539365 TOMM70O94826 608 aa17.86■□□□□ 0.45
PTPN6-213ENST00000539365 NCBP3Q53F19 620 aaKnown RBP17.86■□□□□ 0.45
PTPN6-213ENST00000539365 DPY19L2Q6NUT2 758 aa17.86■□□□□ 0.45
PTPN6-213ENST00000539365 C16orf71Q8IYS4 520 aaPredicted RBP17.86■□□□□ 0.45
PTPN6-213ENST00000539365 UTP14AQ9BVJ6 771 aaKnown RBP17.86■□□□□ 0.45
PTPN6-213ENST00000539365 TAOK3Q9H2K8 898 aa17.86■□□□□ 0.45
PTPN6-213ENST00000539365 LTBP3Q9NS15 1303 aa17.86■□□□□ 0.45
PTPN6-213ENST00000539365 TCIRG1Q13488 830 aa17.85■□□□□ 0.45
PTPN6-213ENST00000539365 CCDC27Q2M243 656 aa17.85■□□□□ 0.45
PTPN6-213ENST00000539365 CCDC93Q567U6 631 aa17.85■□□□□ 0.45
PTPN6-213ENST00000539365 ANKRD13DQ6ZTN6 518 aa17.85■□□□□ 0.45
PTPN6-213ENST00000539365 UBN2Q6ZU65 1347 aa17.85■□□□□ 0.45
PTPN6-213ENST00000539365 RTKN2Q8IZC4 609 aa17.85■□□□□ 0.45
PTPN6-213ENST00000539365 RPGRQ92834 1020 aaKnown RBP17.85■□□□□ 0.45
PTPN6-213ENST00000539365 NLRP3Q96P20 1036 aa17.85■□□□□ 0.45
PTPN6-213ENST00000539365 CHPF2Q9P2E5 772 aa17.85■□□□□ 0.45
PTPN6-213ENST00000539365 RNF123Q5XPI4 1314 aa17.84■□□□□ 0.45
PTPN6-213ENST00000539365 CRY2Q49AN0 593 aa17.84■□□□□ 0.45
PTPN6-213ENST00000539365 SLC10A5Q5PT55 438 aa17.84■□□□□ 0.45
PTPN6-213ENST00000539365 PLBD2Q8NHP8 589 aa17.84■□□□□ 0.45
PTPN6-213ENST00000539365 C7orf43Q8WVR3 580 aa17.84■□□□□ 0.45
PTPN6-213ENST00000539365 RBM17Q96I25 401 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms