RNA–Protein interactions for RNA: ENST00000539276.6

ATP2A2-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-204ENST00000539276 MYD88Q99836 296 aa18.59■□□□□ 0.57
ATP2A2-204ENST00000539276 LRRC2Q9BYS8 371 aa18.59■□□□□ 0.57
ATP2A2-204ENST00000539276 AATKQ6ZMQ8 1374 aa18.58■□□□□ 0.57
ATP2A2-204ENST00000539276 HOXC9P31274 260 aa18.58■□□□□ 0.57
ATP2A2-204ENST00000539276 HSPA4P34932 840 aa18.58■□□□□ 0.57
ATP2A2-204ENST00000539276 IL17REQ8NFR9 667 aa18.58■□□□□ 0.56
ATP2A2-204ENST00000539276 TSC1Q92574 1164 aa18.58■□□□□ 0.56
ATP2A2-204ENST00000539276 LGR6Q9HBX8 967 aa18.58■□□□□ 0.56
ATP2A2-204ENST00000539276 DACT1Q9NYF0 836 aa18.58■□□□□ 0.56
ATP2A2-204ENST00000539276 DDIT3P35638 169 aa18.58■□□□□ 0.56
ATP2A2-204ENST00000539276 SYNE3Q6ZMZ3 975 aa18.58■□□□□ 0.56
ATP2A2-204ENST00000539276 PDCL2Q8N4E4 241 aa18.58■□□□□ 0.56
ATP2A2-204ENST00000539276 ZDHHC9Q9Y397 364 aa18.58■□□□□ 0.56
ATP2A2-204ENST00000539276 RAD50Q92878 1312 aa18.57■□□□□ 0.56
ATP2A2-204ENST00000539276 SMC2O95347 1197 aa18.57■□□□□ 0.56
ATP2A2-204ENST00000539276 CCDC112Q8NEF3 446 aa18.57■□□□□ 0.56
ATP2A2-204ENST00000539276 OSBPL3Q9H4L5 887 aa18.57■□□□□ 0.56
ATP2A2-204ENST00000539276 MAP3K5Q99683 1374 aa18.57■□□□□ 0.56
ATP2A2-204ENST00000539276 MYOM1P52179 1685 aa18.57■□□□□ 0.56
ATP2A2-204ENST00000539276 PIP4K2AP48426 406 aaPredicted RBP18.56■□□□□ 0.56
ATP2A2-204ENST00000539276 NMIQ13287 307 aaPredicted RBP18.56■□□□□ 0.56
ATP2A2-204ENST00000539276 ZNF165P49910 485 aa18.56■□□□□ 0.56
ATP2A2-204ENST00000539276 RALYLQ86SE5 291 aaKnown RBP18.56■□□□□ 0.56
ATP2A2-204ENST00000539276 RASEFQ8IZ41 740 aa18.56■□□□□ 0.56
ATP2A2-204ENST00000539276 CFAP45Q9UL16 551 aa18.56■□□□□ 0.56
ATP2A2-204ENST00000539276 CCT2P78371 535 aaKnown RBP18.55■□□□□ 0.56
ATP2A2-204ENST00000539276 STK38Q15208 465 aa18.55■□□□□ 0.56
ATP2A2-204ENST00000539276 CREBRFQ8IUR6 639 aa18.55■□□□□ 0.56
ATP2A2-204ENST00000539276 KIAA1210Q9ULL0 1709 aa18.55■□□□□ 0.56
ATP2A2-204ENST00000539276 SLC39A6Q13433 755 aa18.55■□□□□ 0.56
ATP2A2-204ENST00000539276 KRT32Q14532 448 aa18.55■□□□□ 0.56
ATP2A2-204ENST00000539276 CCDC85AQ96PX6 553 aaPredicted RBP18.55■□□□□ 0.56
ATP2A2-204ENST00000539276 ATP7BP35670 1465 aa18.55■□□□□ 0.56
ATP2A2-204ENST00000539276 ADGRB1O14514 1584 aa18.55■□□□□ 0.56
ATP2A2-204ENST00000539276 FKBP4Q02790 459 aaKnown RBP eCLIP18.54■□□□□ 0.56
ATP2A2-204ENST00000539276 CREB3L3Q68CJ9 461 aa18.54■□□□□ 0.56
ATP2A2-204ENST00000539276 LARP1Q6PKG0 1096 aaKnown RBP18.54■□□□□ 0.56
ATP2A2-204ENST00000539276 CCDC186Q7Z3E2 898 aa18.54■□□□□ 0.56
ATP2A2-204ENST00000539276 SPDYE4A6NLX3 237 aa18.54■□□□□ 0.56
ATP2A2-204ENST00000539276 ATP5J2-PTCD1G3V325 749 aa18.54■□□□□ 0.56
ATP2A2-204ENST00000539276 PTCD1O75127 700 aaKnown RBP18.54■□□□□ 0.56
ATP2A2-204ENST00000539276 FAM227BQ96M60 508 aa18.54■□□□□ 0.56
ATP2A2-204ENST00000539276 NRXN1Q9ULB1 1477 aa18.54■□□□□ 0.56
ATP2A2-204ENST00000539276 IBTKQ9P2D0 1353 aaPredicted RBP18.54■□□□□ 0.56
ATP2A2-204ENST00000539276 TRDNQ13061 729 aa18.54■□□□□ 0.56
ATP2A2-204ENST00000539276 CCAR2Q8N163 923 aaKnown RBP18.54■□□□□ 0.56
ATP2A2-204ENST00000539276 KLHDC4Q8TBB5 520 aa18.54■□□□□ 0.56
ATP2A2-204ENST00000539276 INO80Q9ULG1 1556 aaPredicted RBP18.54■□□□□ 0.56
ATP2A2-204ENST00000539276 KCNQ3O43525 872 aa18.54■□□□□ 0.56
ATP2A2-204ENST00000539276 ANO6Q4KMQ2 910 aa18.54■□□□□ 0.56
ATP2A2-204ENST00000539276 LUZP1Q86V48 1076 aa18.54■□□□□ 0.56
ATP2A2-204ENST00000539276 HECW2Q9P2P5 1572 aa18.53■□□□□ 0.56
ATP2A2-204ENST00000539276 PLEKHG3A1L390 1219 aa18.53■□□□□ 0.56
ATP2A2-204ENST00000539276 NAT10Q9H0A0 1025 aaKnown RBP18.53■□□□□ 0.56
ATP2A2-204ENST00000539276 CLIP2Q9UDT6 1046 aa18.53■□□□□ 0.56
ATP2A2-204ENST00000539276 SBNO1A3KN83 1393 aa18.53■□□□□ 0.56
ATP2A2-204ENST00000539276 GRM8O00222 908 aa18.53■□□□□ 0.56
ATP2A2-204ENST00000539276 DDX46Q7L014 1031 aaKnown RBP18.53■□□□□ 0.56
ATP2A2-204ENST00000539276 UBE3BQ7Z3V4 1068 aa18.53■□□□□ 0.56
ATP2A2-204ENST00000539276 SSH3Q8TE77 659 aa18.53■□□□□ 0.56
ATP2A2-204ENST00000539276 MED14O60244 1454 aa18.53■□□□□ 0.56
ATP2A2-204ENST00000539276 ZNF500O60304 480 aaPredicted RBP18.53■□□□□ 0.56
ATP2A2-204ENST00000539276 FAM200AQ8TCP9 573 aa18.53■□□□□ 0.56
ATP2A2-204ENST00000539276 HYPKQ9NX55 129 aa18.53■□□□□ 0.56
ATP2A2-204ENST00000539276 CPLX2Q6PUV4 134 aaKnown RBP18.52■□□□□ 0.56
ATP2A2-204ENST00000539276 KCNH5Q8NCM2 988 aa18.52■□□□□ 0.56
ATP2A2-204ENST00000539276 BRF1Q92994 677 aa18.52■□□□□ 0.56
ATP2A2-204ENST00000539276 ZNF396Q96N95 335 aaPredicted RBP18.52■□□□□ 0.56
ATP2A2-204ENST00000539276 TATP17735 454 aaPredicted RBP18.52■□□□□ 0.56
ATP2A2-204ENST00000539276 PPP4R3BQ5MIZ7 849 aa18.52■□□□□ 0.56
ATP2A2-204ENST00000539276 KSR2Q6VAB6 950 aa18.52■□□□□ 0.56
ATP2A2-204ENST00000539276 PRIMPOLQ96LW4 560 aa18.52■□□□□ 0.56
ATP2A2-204ENST00000539276 NEO1Q92859 1461 aa18.52■□□□□ 0.56
ATP2A2-204ENST00000539276 CDK12Q9NYV4 1490 aaPredicted RBP18.52■□□□□ 0.56
ATP2A2-204ENST00000539276 PTGS1P23219 599 aa18.52■□□□□ 0.55
ATP2A2-204ENST00000539276 PTH1RQ03431 593 aa18.52■□□□□ 0.55
ATP2A2-204ENST00000539276 CUL4AQ13619 759 aa18.52■□□□□ 0.55
ATP2A2-204ENST00000539276 VPS53Q5VIR6 699 aa18.52■□□□□ 0.55
ATP2A2-204ENST00000539276 CHMP4CQ96CF2 233 aa18.52■□□□□ 0.55
ATP2A2-204ENST00000539276 TTC41PQ6P2S7 1318 aa18.52■□□□□ 0.55
ATP2A2-204ENST00000539276 TNNT1P13805 278 aa18.51■□□□□ 0.55
ATP2A2-204ENST00000539276 CDK11BP21127 795 aaKnown RBP18.51■□□□□ 0.55
ATP2A2-204ENST00000539276 LTKP29376 864 aa18.51■□□□□ 0.55
ATP2A2-204ENST00000539276 AMOTQ4VCS5 1084 aa18.51■□□□□ 0.55
ATP2A2-204ENST00000539276 RUFY3Q7L099 469 aa18.51■□□□□ 0.55
ATP2A2-204ENST00000539276 CCDC171Q6TFL3 1326 aa18.51■□□□□ 0.55
ATP2A2-204ENST00000539276 TYRO3Q06418 890 aa18.51■□□□□ 0.55
ATP2A2-204ENST00000539276 LRRFIP1Q32MZ4 808 aaKnown RBP18.51■□□□□ 0.55
ATP2A2-204ENST00000539276 NEK1Q96PY6 1258 aa18.51■□□□□ 0.55
ATP2A2-204ENST00000539276 DNAJC25Q9H1X3 360 aa18.51■□□□□ 0.55
ATP2A2-204ENST00000539276 DDX19AQ9NUU7 478 aaKnown RBP18.51■□□□□ 0.55
ATP2A2-204ENST00000539276 TRMT1Q9NXH9 659 aaKnown RBP18.51■□□□□ 0.55
ATP2A2-204ENST00000539276 NFXL1Q6ZNB6 911 aa18.51■□□□□ 0.55
ATP2A2-204ENST00000539276 STK11IPQ8N1F8 1099 aa18.51■□□□□ 0.55
ATP2A2-204ENST00000539276 CLEC17AQ6ZS10 378 aa18.5■□□□□ 0.55
ATP2A2-204ENST00000539276 ZHX1Q9UKY1 873 aaPredicted RBP18.5■□□□□ 0.55
ATP2A2-204ENST00000539276 A0A087WZG4 1122 aa18.5■□□□□ 0.55
ATP2A2-204ENST00000539276 NCOA3Q9Y6Q9 1424 aa18.5■□□□□ 0.55
ATP2A2-204ENST00000539276 KCNA6P17658 529 aa18.49■□□□□ 0.55
ATP2A2-204ENST00000539276 CYP2E1P05181 493 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms