RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 SUCLG2Q96I99 432 aa21.81■■□□□ 1.08
GNE-204ENST00000539208 NEXNQ0ZGT2 675 aa21.8■■□□□ 1.08
GNE-204ENST00000539208 GOLGA6L3A6NEY3 463 aa21.8■■□□□ 1.08
GNE-204ENST00000539208 GOLGA6L22H0YM25 854 aa21.8■■□□□ 1.08
GNE-204ENST00000539208 SGSM2O43147 1006 aa21.8■■□□□ 1.08
GNE-204ENST00000539208 BRINP3Q76B58 766 aa21.8■■□□□ 1.08
GNE-204ENST00000539208 TTC5Q8N0Z6 440 aa21.8■■□□□ 1.08
GNE-204ENST00000539208 FMNL2Q96PY5 1086 aa21.8■■□□□ 1.08
GNE-204ENST00000539208 PALD1Q9ULE6 856 aa21.8■■□□□ 1.08
GNE-204ENST00000539208 HSPA4P34932 840 aa21.79■■□□□ 1.08
GNE-204ENST00000539208 LRP10Q7Z4F1 713 aa21.79■■□□□ 1.08
GNE-204ENST00000539208 METTL22Q9BUU2 404 aaPredicted RBP21.79■■□□□ 1.08
GNE-204ENST00000539208 ISY1Q9ULR0 285 aaKnown RBP21.79■■□□□ 1.08
GNE-204ENST00000539208 BAG4O95429 457 aaKnown RBP21.78■■□□□ 1.08
GNE-204ENST00000539208 XAGE3Q8WTP9 111 aa21.78■■□□□ 1.08
GNE-204ENST00000539208 GPATCH3Q96I76 525 aa21.78■■□□□ 1.08
GNE-204ENST00000539208 GZF1Q9H116 711 aaPredicted RBP21.78■■□□□ 1.08
GNE-204ENST00000539208 ECHDC1Q9NTX5 307 aa21.78■■□□□ 1.08
GNE-204ENST00000539208 NEURL1BA8MQ27 555 aa21.78■■□□□ 1.08
GNE-204ENST00000539208 COPS6Q7L5N1 327 aa21.78■■□□□ 1.08
GNE-204ENST00000539208 BICC1Q9H694 974 aaKnown RBP21.78■■□□□ 1.08
GNE-204ENST00000539208 HSPA2P54652 639 aa21.77■■□□□ 1.08
GNE-204ENST00000539208 IL25Q9H293 177 aa21.77■■□□□ 1.08
GNE-204ENST00000539208 MAP4K4O95819 1239 aaPredicted RBP21.77■■□□□ 1.07
GNE-204ENST00000539208 MYL6BP14649 208 aa21.77■■□□□ 1.07
GNE-204ENST00000539208 CUL4AQ13619 759 aa21.77■■□□□ 1.07
GNE-204ENST00000539208 GCKRQ14397 625 aa21.77■■□□□ 1.07
GNE-204ENST00000539208 TMX3Q96JJ7 454 aa21.77■■□□□ 1.07
GNE-204ENST00000539208 USP16Q9Y5T5 823 aa21.77■■□□□ 1.07
GNE-204ENST00000539208 RAD50Q92878 1312 aa21.76■■□□□ 1.07
GNE-204ENST00000539208 CABP4P57796 275 aa21.76■■□□□ 1.07
GNE-204ENST00000539208 ANKRD13DQ6ZTN6 518 aa21.76■■□□□ 1.07
GNE-204ENST00000539208 PA2G4Q9UQ80 394 aaKnown RBP21.76■■□□□ 1.07
GNE-204ENST00000539208 IFIT2P09913 472 aaKnown RBP21.75■■□□□ 1.07
GNE-204ENST00000539208 ZGPATQ8N5A5 531 aaKnown RBP21.75■■□□□ 1.07
GNE-204ENST00000539208 WDR17Q8IZU2 1322 aa21.75■■□□□ 1.07
GNE-204ENST00000539208 G3BP1Q13283 466 aaKnown RBP eCLIP21.75■■□□□ 1.07
GNE-204ENST00000539208 INTS4Q96HW7 963 aaKnown RBP21.75■■□□□ 1.07
GNE-204ENST00000539208 SOS2Q07890 1332 aaPredicted RBP21.75■■□□□ 1.07
GNE-204ENST00000539208 COL15A1P39059 1388 aa21.74■■□□□ 1.07
GNE-204ENST00000539208 LSG1Q9H089 658 aaKnown RBP21.74■■□□□ 1.07
GNE-204ENST00000539208 SASH1O94885 1247 aa21.74■■□□□ 1.07
GNE-204ENST00000539208 LAMB4A4D0S4 1761 aa21.74■■□□□ 1.07
GNE-204ENST00000539208 GLI3P10071 1580 aa21.73■■□□□ 1.07
GNE-204ENST00000539208 RUFY2Q8WXA3 655 aa21.73■■□□□ 1.07
GNE-204ENST00000539208 MYD88Q99836 296 aa21.73■■□□□ 1.07
GNE-204ENST00000539208 ERBB4Q15303 1308 aa21.72■■□□□ 1.07
GNE-204ENST00000539208 AACSQ86V21 672 aa21.72■■□□□ 1.07
GNE-204ENST00000539208 PCDH11XQ9BZA7 1347 aa21.72■■□□□ 1.07
GNE-204ENST00000539208 PCDH11YQ9BZA8 1340 aa21.72■■□□□ 1.07
GNE-204ENST00000539208 XRCC6P12956 609 aaKnown RBP eCLIP21.71■■□□□ 1.07
GNE-204ENST00000539208 KIAA1211Q6ZU35 1233 aa21.71■■□□□ 1.07
GNE-204ENST00000539208 EVI5LQ96CN4 794 aa21.71■■□□□ 1.07
GNE-204ENST00000539208 MRE11P49959 708 aa21.71■■□□□ 1.07
GNE-204ENST00000539208 KLHL40Q2TBA0 621 aa21.71■■□□□ 1.07
GNE-204ENST00000539208 PRDM11Q9NQV5 511 aa21.71■■□□□ 1.07
GNE-204ENST00000539208 ZDHHC9Q9Y397 364 aa21.71■■□□□ 1.07
GNE-204ENST00000539208 ERVV-2B6SEH9 535 aa21.7■■□□□ 1.06
GNE-204ENST00000539208 PKP1Q13835 747 aa21.7■■□□□ 1.06
GNE-204ENST00000539208 ZCRB1Q8TBF4 217 aaKnown RBP21.7■■□□□ 1.06
GNE-204ENST00000539208 DIAPH3Q9NSV4 1193 aa21.7■■□□□ 1.06
GNE-204ENST00000539208 SLAIN2Q9P270 581 aa21.7■■□□□ 1.06
GNE-204ENST00000539208 STRCQ7RTU9 1775 aa21.7■■□□□ 1.06
GNE-204ENST00000539208 EAF2Q96CJ1 260 aaPredicted RBP21.7■■□□□ 1.06
GNE-204ENST00000539208 COL5A2P05997 1499 aaPredicted RBP21.69■■□□□ 1.06
GNE-204ENST00000539208 NKX1-1Q15270 411 aaPredicted RBP21.69■■□□□ 1.06
GNE-204ENST00000539208 CWC27Q6UX04 472 aaKnown RBP21.69■■□□□ 1.06
GNE-204ENST00000539208 SNX14Q9Y5W7 946 aa21.69■■□□□ 1.06
GNE-204ENST00000539208 ARFGEF2Q9Y6D5 1785 aa21.69■■□□□ 1.06
GNE-204ENST00000539208 PLBD2Q8NHP8 589 aa21.68■■□□□ 1.06
GNE-204ENST00000539208 COPRSQ9NQ92 184 aa21.68■■□□□ 1.06
GNE-204ENST00000539208 HIP1O00291 1037 aa21.68■■□□□ 1.06
GNE-204ENST00000539208 EPHA10Q5JZY3 1008 aa21.68■■□□□ 1.06
GNE-204ENST00000539208 TOM1L2Q6ZVM7 507 aa21.68■■□□□ 1.06
GNE-204ENST00000539208 UBR2Q8IWV8 1755 aa21.67■■□□□ 1.06
GNE-204ENST00000539208 RABL6Q3YEC7 729 aaPredicted RBP21.67■■□□□ 1.06
GNE-204ENST00000539208 UPF3BQ9BZI7 483 aaKnown RBP21.67■■□□□ 1.06
GNE-204ENST00000539208 MCTP1Q6DN14 999 aa21.67■■□□□ 1.06
GNE-204ENST00000539208 CARD10Q9BWT7 1032 aa21.67■■□□□ 1.06
GNE-204ENST00000539208 AFDNP55196 1824 aaKnown RBP21.66■■□□□ 1.06
GNE-204ENST00000539208 KCNB2Q92953 911 aa21.66■■□□□ 1.06
GNE-204ENST00000539208 LMBRD1Q9NUN5 540 aa21.66■■□□□ 1.06
GNE-204ENST00000539208 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.66■■□□□ 1.06
GNE-204ENST00000539208 ABCA3Q99758 1704 aa21.65■■□□□ 1.06
GNE-204ENST00000539208 RFX5P48382 616 aaPredicted RBP21.65■■□□□ 1.06
GNE-204ENST00000539208 TTC14Q96N46 770 aa21.65■■□□□ 1.06
GNE-204ENST00000539208 SNRKQ9NRH2 765 aa21.65■■□□□ 1.06
GNE-204ENST00000539208 DDX49Q9Y6V7 483 aaKnown RBP21.65■■□□□ 1.06
GNE-204ENST00000539208 PAPPAQ13219 1627 aa21.65■■□□□ 1.06
GNE-204ENST00000539208 BRD1O95696 1058 aa21.64■■□□□ 1.06
GNE-204ENST00000539208 GRPEL1Q9HAV7 217 aa21.64■■□□□ 1.06
GNE-204ENST00000539208 IL2RBP14784 551 aa21.64■■□□□ 1.05
GNE-204ENST00000539208 RASEFQ8IZ41 740 aa21.64■■□□□ 1.05
GNE-204ENST00000539208 CCDC8Q9H0W5 538 aaPredicted RBP21.64■■□□□ 1.05
GNE-204ENST00000539208 PIP4K2AP48426 406 aaPredicted RBP21.63■■□□□ 1.05
GNE-204ENST00000539208 CASP7P55210 303 aa21.63■■□□□ 1.05
GNE-204ENST00000539208 SIL1Q9H173 461 aa21.63■■□□□ 1.05
GNE-204ENST00000539208 KCPQ6ZWJ8 1503 aa21.62■■□□□ 1.05
GNE-204ENST00000539208 NBPF26B4DH59 902 aa21.62■■□□□ 1.05
GNE-204ENST00000539208 PTPN12Q05209 780 aaKnown RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms