RNA–Protein interactions for RNA: ENST00000539191.1

NPIPB4-210, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 305 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-210ENST00000539191 VSIG10Q8N0Z9 540 aa11.11□□□□□ -0.63
NPIPB4-210ENST00000539191 CNBD1Q8NA66 436 aa11.11□□□□□ -0.63
NPIPB4-210ENST00000539191 BTBD11A6QL63 1104 aa11.1□□□□□ -0.63
NPIPB4-210ENST00000539191 DZIP3Q86Y13 1208 aaKnown RBP11.1□□□□□ -0.63
NPIPB4-210ENST00000539191 NGEFQ8N5V2 710 aa11.1□□□□□ -0.63
NPIPB4-210ENST00000539191 RSPH6AQ9H0K4 717 aa11.1□□□□□ -0.63
NPIPB4-210ENST00000539191 ZNF541Q9H0D2 1346 aa11.09□□□□□ -0.63
NPIPB4-210ENST00000539191 NUP98P52948 1817 aa11.09□□□□□ -0.63
NPIPB4-210ENST00000539191 COL4A5P29400 1685 aa11.09□□□□□ -0.63
NPIPB4-210ENST00000539191 NBPF26B4DH59 902 aa11.09□□□□□ -0.63
NPIPB4-210ENST00000539191 HLFQ16534 295 aa11.09□□□□□ -0.63
NPIPB4-210ENST00000539191 NBPF10Q6P3W6 841 aaKnown RBP11.09□□□□□ -0.63
NPIPB4-210ENST00000539191 NBPF15Q8N660 670 aa11.09□□□□□ -0.63
NPIPB4-210ENST00000539191 FMNL2Q96PY5 1086 aa11.09□□□□□ -0.63
NPIPB4-210ENST00000539191 SETDB2Q96T68 719 aa11.09□□□□□ -0.63
NPIPB4-210ENST00000539191 BRIP1Q9BX63 1249 aa11.09□□□□□ -0.63
NPIPB4-210ENST00000539191 TAOK3Q9H2K8 898 aa11.09□□□□□ -0.63
NPIPB4-210ENST00000539191 ZNF277Q9NRM2 450 aaPredicted RBP11.09□□□□□ -0.63
NPIPB4-210ENST00000539191 LAMB4A4D0S4 1761 aa11.08□□□□□ -0.64
NPIPB4-210ENST00000539191 CEMIPQ8WUJ3 1361 aa11.08□□□□□ -0.64
NPIPB4-210ENST00000539191 SRGNP10124 158 aa11.08□□□□□ -0.64
NPIPB4-210ENST00000539191 PDE6BP35913 854 aa11.08□□□□□ -0.64
NPIPB4-210ENST00000539191 IL6STP40189 918 aaPredicted RBP11.08□□□□□ -0.64
NPIPB4-210ENST00000539191 ZNF428Q96B54 188 aa11.08□□□□□ -0.64
NPIPB4-210ENST00000539191 LTBP1Q14766 1721 aa11.07□□□□□ -0.64
NPIPB4-210ENST00000539191 TAF1P21675 1872 aa11.07□□□□□ -0.64
NPIPB4-210ENST00000539191 A0A087WZG4 1122 aa11.07□□□□□ -0.64
NPIPB4-210ENST00000539191 TCERG1O14776 1098 aaKnown RBP11.07□□□□□ -0.64
NPIPB4-210ENST00000539191 FMR1Q06787 632 aaKnown RBP eCLIP11.07□□□□□ -0.64
NPIPB4-210ENST00000539191 NBPF5PQ86XG9 351 aaPredicted RBP11.07□□□□□ -0.64
NPIPB4-210ENST00000539191 GAS2L2Q8NHY3 880 aa11.07□□□□□ -0.64
NPIPB4-210ENST00000539191 THUMPD2Q9BTF0 503 aaKnown RBP11.07□□□□□ -0.64
NPIPB4-210ENST00000539191 ABCC12Q96J65 1359 aa11.06□□□□□ -0.64
NPIPB4-210ENST00000539191 KDM3BQ7LBC6 1761 aa11.06□□□□□ -0.64
NPIPB4-210ENST00000539191 U2AF1L5P0DN76 240 aaPredicted RBP11.06□□□□□ -0.64
NPIPB4-210ENST00000539191 ST5P78524 1137 aa11.06□□□□□ -0.64
NPIPB4-210ENST00000539191 U2AF1Q01081 240 aaKnown RBP eCLIP11.06□□□□□ -0.64
NPIPB4-210ENST00000539191 EAPPQ56P03 285 aaPredicted RBP11.06□□□□□ -0.64
NPIPB4-210ENST00000539191 NUTM1Q86Y26 1132 aa11.06□□□□□ -0.64
NPIPB4-210ENST00000539191 SCN4AP35499 1836 aa11.06□□□□□ -0.64
NPIPB4-210ENST00000539191 ZC3H4Q9UPT8 1303 aaKnown RBP11.06□□□□□ -0.64
NPIPB4-210ENST00000539191 PPP2R1AP30153 589 aa11.05□□□□□ -0.64
NPIPB4-210ENST00000539191 CHADLQ6NUI6 762 aa11.05□□□□□ -0.64
NPIPB4-210ENST00000539191 DPY19L2Q6NUT2 758 aa11.05□□□□□ -0.64
NPIPB4-210ENST00000539191 C7orf43Q8WVR3 580 aa11.05□□□□□ -0.64
NPIPB4-210ENST00000539191 NIP7Q9Y221 180 aaKnown RBP eCLIP11.05□□□□□ -0.64
NPIPB4-210ENST00000539191 ADAMTSL1Q8N6G6 1762 aa11.05□□□□□ -0.64
NPIPB4-210ENST00000539191 RNF123Q5XPI4 1314 aa11.05□□□□□ -0.64
NPIPB4-210ENST00000539191 GPTP24298 496 aa11.04□□□□□ -0.64
NPIPB4-210ENST00000539191 MAP1SQ66K74 1059 aaPredicted RBP11.04□□□□□ -0.64
NPIPB4-210ENST00000539191 STYK1Q6J9G0 422 aa11.04□□□□□ -0.64
NPIPB4-210ENST00000539191 C3orf67Q6ZVT6 689 aa11.04□□□□□ -0.64
NPIPB4-210ENST00000539191 CNKSR1Q969H4 720 aa11.04□□□□□ -0.64
NPIPB4-210ENST00000539191 MASTLQ96GX5 879 aa11.04□□□□□ -0.64
NPIPB4-210ENST00000539191 FOXN1O15353 648 aa11.03□□□□□ -0.64
NPIPB4-210ENST00000539191 TTLL7Q6ZT98 887 aa11.03□□□□□ -0.64
NPIPB4-210ENST00000539191 NPM2Q86SE8 214 aaKnown RBP11.03□□□□□ -0.64
NPIPB4-210ENST00000539191 TAF1DQ9H5J8 278 aaPredicted RBP11.03□□□□□ -0.64
NPIPB4-210ENST00000539191 LAMB2P55268 1798 aa11.03□□□□□ -0.64
NPIPB4-210ENST00000539191 SNRPA1P09661 255 aaKnown RBP11.02□□□□□ -0.65
NPIPB4-210ENST00000539191 MYL6BP14649 208 aa11.02□□□□□ -0.65
NPIPB4-210ENST00000539191 TEX13AQ9BXU3 409 aaPredicted RBP11.02□□□□□ -0.65
NPIPB4-210ENST00000539191 CLEC11AQ9Y240 323 aa11.02□□□□□ -0.65
NPIPB4-210ENST00000539191 RRP7AQ9Y3A4 280 aaKnown RBP11.02□□□□□ -0.65
NPIPB4-210ENST00000539191 ANXA1P04083 346 aa11.01□□□□□ -0.65
NPIPB4-210ENST00000539191 VEGFBP49765 207 aa11.01□□□□□ -0.65
NPIPB4-210ENST00000539191 GRM1Q13255 1194 aa11.01□□□□□ -0.65
NPIPB4-210ENST00000539191 CCDC93Q567U6 631 aa11.01□□□□□ -0.65
NPIPB4-210ENST00000539191 SYNE4Q8N205 404 aa11.01□□□□□ -0.65
NPIPB4-210ENST00000539191 RTF1Q92541 710 aaKnown RBP11.01□□□□□ -0.65
NPIPB4-210ENST00000539191 ZBTB3Q9H5J0 574 aa11.01□□□□□ -0.65
NPIPB4-210ENST00000539191 GJA3Q9Y6H8 435 aa11.01□□□□□ -0.65
NPIPB4-210ENST00000539191 UBN2Q6ZU65 1347 aa11.01□□□□□ -0.65
NPIPB4-210ENST00000539191 PASKQ96RG2 1323 aa11.01□□□□□ -0.65
NPIPB4-210ENST00000539191 LTBP3Q9NS15 1303 aa11.01□□□□□ -0.65
NPIPB4-210ENST00000539191 NPC1L1Q9UHC9 1359 aa11.01□□□□□ -0.65
NPIPB4-210ENST00000539191 ITGBL1O95965 494 aaPredicted RBP11□□□□□ -0.65
NPIPB4-210ENST00000539191 NPR1P16066 1061 aa11□□□□□ -0.65
NPIPB4-210ENST00000539191 FKBP4Q02790 459 aaKnown RBP eCLIP11□□□□□ -0.65
NPIPB4-210ENST00000539191 CFAP53Q96M91 514 aa11□□□□□ -0.65
NPIPB4-210ENST00000539191 CREBZFQ9NS37 354 aa11□□□□□ -0.65
NPIPB4-210ENST00000539191 CNTNAP1P78357 1384 aa11□□□□□ -0.65
NPIPB4-210ENST00000539191 SNED1Q8TER0 1413 aa11□□□□□ -0.65
NPIPB4-210ENST00000539191 GTF2E1P29083 439 aaPredicted RBP10.99□□□□□ -0.65
NPIPB4-210ENST00000539191 EPHX2P34913 555 aa10.99□□□□□ -0.65
NPIPB4-210ENST00000539191 IARSP41252 1262 aaKnown RBP10.99□□□□□ -0.65
NPIPB4-210ENST00000539191 NECTIN2Q92692 538 aa10.99□□□□□ -0.65
NPIPB4-210ENST00000539191 COL4A1P02462 1669 aa10.98□□□□□ -0.65
NPIPB4-210ENST00000539191 TRAF5O00463 557 aa10.98□□□□□ -0.65
NPIPB4-210ENST00000539191 PROSER3Q2NL68 480 aa10.98□□□□□ -0.65
NPIPB4-210ENST00000539191 TPTE2Q6XPS3 522 aa10.98□□□□□ -0.65
NPIPB4-210ENST00000539191 LDHDQ86WU2 507 aa10.98□□□□□ -0.65
NPIPB4-210ENST00000539191 HACL1Q9UJ83 578 aa10.98□□□□□ -0.65
NPIPB4-210ENST00000539191 TSKSQ9UJT2 592 aa10.98□□□□□ -0.65
NPIPB4-210ENST00000539191 ZNF652Q9Y2D9 606 aa10.98□□□□□ -0.65
NPIPB4-210ENST00000539191 ANKRD36CQ5JPF3 1778 aa10.98□□□□□ -0.65
NPIPB4-210ENST00000539191 TRPM7Q96QT4 1865 aa10.98□□□□□ -0.65
NPIPB4-210ENST00000539191 KLRG2A4D1S0 409 aaPredicted RBP10.97□□□□□ -0.65
NPIPB4-210ENST00000539191 EPS15P42566 896 aa10.97□□□□□ -0.65
NPIPB4-210ENST00000539191 LBX1P52954 281 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms