RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 NEUROD6Q96NK8 337 aa10.93□□□□□ -0.66
GGA3-202ENST00000538886 NLRP3Q96P20 1036 aa10.93□□□□□ -0.66
GGA3-202ENST00000538886 TNNQ9UQP3 1299 aa10.93□□□□□ -0.66
GGA3-202ENST00000538886 KDRP35968 1356 aa10.93□□□□□ -0.66
GGA3-202ENST00000538886 RARSP54136 660 aaKnown RBP10.93□□□□□ -0.66
GGA3-202ENST00000538886 HLFQ16534 295 aa10.93□□□□□ -0.66
GGA3-202ENST00000538886 COL23A1Q86Y22 540 aaPredicted RBP10.93□□□□□ -0.66
GGA3-202ENST00000538886 ANKIB1Q9P2G1 1089 aa10.93□□□□□ -0.66
GGA3-202ENST00000538886 CCDC57Q2TAC2 916 aa10.93□□□□□ -0.66
GGA3-202ENST00000538886 C6orf229H3BNL8 230 aa10.92□□□□□ -0.66
GGA3-202ENST00000538886 NKX1-1Q15270 411 aaPredicted RBP10.92□□□□□ -0.66
GGA3-202ENST00000538886 ZNF827Q17R98 1081 aa10.92□□□□□ -0.66
GGA3-202ENST00000538886 HSP90AB3PQ58FF7 597 aa10.92□□□□□ -0.66
GGA3-202ENST00000538886 CWC25Q9NXE8 425 aaPredicted RBP10.92□□□□□ -0.66
GGA3-202ENST00000538886 TNS2Q63HR2 1409 aa10.92□□□□□ -0.66
GGA3-202ENST00000538886 ZNF526Q8TF50 670 aaPredicted RBP10.92□□□□□ -0.66
GGA3-202ENST00000538886 IPO9Q96P70 1041 aaKnown RBP10.92□□□□□ -0.66
GGA3-202ENST00000538886 UTP14AQ9BVJ6 771 aaKnown RBP10.92□□□□□ -0.66
GGA3-202ENST00000538886 SERPINB2P05120 415 aa10.92□□□□□ -0.66
GGA3-202ENST00000538886 HSP90AA2PQ14568 343 aaPredicted RBP10.92□□□□□ -0.66
GGA3-202ENST00000538886 CCDC27Q2M243 656 aa10.92□□□□□ -0.66
GGA3-202ENST00000538886 EP400Q96L91 3159 aa10.92□□□□□ -0.66
GGA3-202ENST00000538886 PLSCR1O15162 318 aa10.91□□□□□ -0.66
GGA3-202ENST00000538886 RGS3P49796 1198 aa10.91□□□□□ -0.66
GGA3-202ENST00000538886 ATF7IPQ6VMQ6 1270 aa10.91□□□□□ -0.66
GGA3-202ENST00000538886 DDX46Q7L014 1031 aaKnown RBP10.91□□□□□ -0.66
GGA3-202ENST00000538886 SLC4A9Q96Q91 983 aa10.91□□□□□ -0.66
GGA3-202ENST00000538886 KSR2Q6VAB6 950 aa10.91□□□□□ -0.66
GGA3-202ENST00000538886 PPP4R2Q9NY27 417 aa10.91□□□□□ -0.66
GGA3-202ENST00000538886 NFAT5O94916 1531 aa10.91□□□□□ -0.66
GGA3-202ENST00000538886 IL6STP40189 918 aaPredicted RBP10.91□□□□□ -0.66
GGA3-202ENST00000538886 CRBNQ96SW2 442 aa10.91□□□□□ -0.66
GGA3-202ENST00000538886 NBPF26B4DH59 902 aa10.9□□□□□ -0.66
GGA3-202ENST00000538886 NBPF10Q6P3W6 841 aaKnown RBP10.9□□□□□ -0.66
GGA3-202ENST00000538886 SYNE4Q8N205 404 aa10.9□□□□□ -0.66
GGA3-202ENST00000538886 PROM2Q8N271 834 aa10.9□□□□□ -0.66
GGA3-202ENST00000538886 TMEM57Q8N5G2 664 aa10.9□□□□□ -0.66
GGA3-202ENST00000538886 NBPF15Q8N660 670 aa10.9□□□□□ -0.66
GGA3-202ENST00000538886 NSFL1CQ9UNZ2 370 aaKnown RBP10.9□□□□□ -0.66
GGA3-202ENST00000538886 IRS4O14654 1257 aaPredicted RBP10.9□□□□□ -0.66
GGA3-202ENST00000538886 H0YIN7 160 aa10.9□□□□□ -0.67
GGA3-202ENST00000538886 HELBQ8NG08 1087 aaPredicted RBP10.9□□□□□ -0.67
GGA3-202ENST00000538886 A0A0G2JLW4 131 aa10.89□□□□□ -0.67
GGA3-202ENST00000538886 SURF6O75683 361 aaKnown RBP10.89□□□□□ -0.67
GGA3-202ENST00000538886 TBC1D9BQ66K14 1250 aa10.89□□□□□ -0.67
GGA3-202ENST00000538886 ARHGAP27Q6ZUM4 889 aa10.89□□□□□ -0.67
GGA3-202ENST00000538886 HDAC5Q9UQL6 1122 aa10.89□□□□□ -0.67
GGA3-202ENST00000538886 SRGAP3O43295 1099 aa10.89□□□□□ -0.67
GGA3-202ENST00000538886 C20orf194Q5TEA3 1177 aa10.89□□□□□ -0.67
GGA3-202ENST00000538886 EXOC6Q8TAG9 804 aa10.89□□□□□ -0.67
GGA3-202ENST00000538886 CAMKK2Q96RR4 588 aa10.89□□□□□ -0.67
GGA3-202ENST00000538886 IL16Q14005 1332 aa10.89□□□□□ -0.67
GGA3-202ENST00000538886 PDE4CQ08493 712 aa10.89□□□□□ -0.67
GGA3-202ENST00000538886 G3BP1Q13283 466 aaKnown RBP eCLIP10.89□□□□□ -0.67
GGA3-202ENST00000538886 SLIT3O75094 1523 aa10.88□□□□□ -0.67
GGA3-202ENST00000538886 TRIM27P14373 513 aa10.88□□□□□ -0.67
GGA3-202ENST00000538886 CHMP4BQ9H444 224 aaKnown RBP10.88□□□□□ -0.67
GGA3-202ENST00000538886 KDM6AO15550 1401 aaPredicted RBP10.88□□□□□ -0.67
GGA3-202ENST00000538886 CHRNA5P30532 468 aa10.88□□□□□ -0.67
GGA3-202ENST00000538886 IGHMBP2P38935 993 aaKnown RBP10.88□□□□□ -0.67
GGA3-202ENST00000538886 RRP1P56182 461 aaKnown RBP10.88□□□□□ -0.67
GGA3-202ENST00000538886 C2CD5Q86YS7 1000 aa10.88□□□□□ -0.67
GGA3-202ENST00000538886 PLBD2Q8NHP8 589 aa10.88□□□□□ -0.67
GGA3-202ENST00000538886 NRKQ7Z2Y5 1582 aa10.88□□□□□ -0.67
GGA3-202ENST00000538886 RIMBP2O15034 1052 aa10.88□□□□□ -0.67
GGA3-202ENST00000538886 HSP90B1P14625 803 aaKnown RBP10.88□□□□□ -0.67
GGA3-202ENST00000538886 IFIT5Q13325 482 aaKnown RBP10.88□□□□□ -0.67
GGA3-202ENST00000538886 NFIXQ14938 502 aa10.88□□□□□ -0.67
GGA3-202ENST00000538886 LMBR1LQ6UX01 489 aa10.88□□□□□ -0.67
GGA3-202ENST00000538886 LRRFIP2Q9Y608 721 aaKnown RBP10.88□□□□□ -0.67
GGA3-202ENST00000538886 SH3TC1Q8TE82 1336 aa10.87□□□□□ -0.67
GGA3-202ENST00000538886 CCT4P50991 539 aaKnown RBP10.87□□□□□ -0.67
GGA3-202ENST00000538886 LDHAL6AQ6ZMR3 332 aa10.87□□□□□ -0.67
GGA3-202ENST00000538886 IQSEC3Q9UPP2 1182 aaPredicted RBP10.87□□□□□ -0.67
GGA3-202ENST00000538886 COL15A1P39059 1388 aa10.87□□□□□ -0.67
GGA3-202ENST00000538886 MYOM1P52179 1685 aa10.87□□□□□ -0.67
GGA3-202ENST00000538886 HMMRO75330 724 aa10.87□□□□□ -0.67
GGA3-202ENST00000538886 GNAI3P08754 354 aa10.87□□□□□ -0.67
GGA3-202ENST00000538886 NYXQ9GZU5 481 aa10.87□□□□□ -0.67
GGA3-202ENST00000538886 NARFQ9UHQ1 456 aa10.87□□□□□ -0.67
GGA3-202ENST00000538886 NHSL1Q5SYE7 1610 aa10.86□□□□□ -0.67
GGA3-202ENST00000538886 SSFA2P28290 1259 aa10.86□□□□□ -0.67
GGA3-202ENST00000538886 TCIRG1Q13488 830 aa10.86□□□□□ -0.67
GGA3-202ENST00000538886 JAG2Q9Y219 1238 aa10.86□□□□□ -0.67
GGA3-202ENST00000538886 MAP3K15Q6ZN16 1313 aa10.86□□□□□ -0.67
GGA3-202ENST00000538886 BCL9O00512 1426 aa10.86□□□□□ -0.67
GGA3-202ENST00000538886 ERFEQ4G0M1 354 aa10.86□□□□□ -0.67
GGA3-202ENST00000538886 INTS5Q6P9B9 1019 aaKnown RBP10.86□□□□□ -0.67
GGA3-202ENST00000538886 MRPL50Q8N5N7 158 aaKnown RBP10.86□□□□□ -0.67
GGA3-202ENST00000538886 MEIS3Q99687 375 aa10.86□□□□□ -0.67
GGA3-202ENST00000538886 DDX19BQ9UMR2 479 aa10.86□□□□□ -0.67
GGA3-202ENST00000538886 COL14A1Q05707 1796 aaKnown RBP10.86□□□□□ -0.67
GGA3-202ENST00000538886 GNAI2P04899 355 aa10.86□□□□□ -0.67
GGA3-202ENST00000538886 KLHDC4Q8TBB5 520 aa10.86□□□□□ -0.67
GGA3-202ENST00000538886 HSP90AA1P07900 732 aaKnown RBP10.85□□□□□ -0.67
GGA3-202ENST00000538886 GIGYF2Q6Y7W6 1299 aaKnown RBP10.85□□□□□ -0.67
GGA3-202ENST00000538886 LINS1Q8NG48 757 aa10.85□□□□□ -0.67
GGA3-202ENST00000538886 BABAM1Q9NWV8 329 aa10.85□□□□□ -0.67
GGA3-202ENST00000538886 KIF20BQ96Q89 1820 aa10.85□□□□□ -0.67
GGA3-202ENST00000538886 CHAF1AQ13111 956 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms