RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 TATP17735 454 aaPredicted RBP17.8■□□□□ 0.44
CDCA3-207ENST00000538862 ATP8B2P98198 1209 aa17.8■□□□□ 0.44
CDCA3-207ENST00000538862 PANK2Q9BZ23 570 aa17.8■□□□□ 0.44
CDCA3-207ENST00000538862 SALL3Q9BXA9 1300 aa17.79■□□□□ 0.44
CDCA3-207ENST00000538862 PXDNLA1KZ92 1463 aa17.79■□□□□ 0.44
CDCA3-207ENST00000538862 FKBP5Q13451 457 aaPredicted RBP17.79■□□□□ 0.44
CDCA3-207ENST00000538862 TAF7Q15545 349 aaPredicted RBP17.79■□□□□ 0.44
CDCA3-207ENST00000538862 NHSQ6T4R5 1651 aa17.79■□□□□ 0.44
CDCA3-207ENST00000538862 BAG4O95429 457 aaKnown RBP17.78■□□□□ 0.44
CDCA3-207ENST00000538862 ARXQ96QS3 562 aa17.78■□□□□ 0.44
CDCA3-207ENST00000538862 LRRCC1Q9C099 1032 aa17.78■□□□□ 0.44
CDCA3-207ENST00000538862 CYP2E1P05181 493 aaPredicted RBP17.78■□□□□ 0.44
CDCA3-207ENST00000538862 IL17REQ8NFR9 667 aa17.78■□□□□ 0.44
CDCA3-207ENST00000538862 RREB1Q92766 1687 aa17.78■□□□□ 0.44
CDCA3-207ENST00000538862 TUBGCP6Q96RT7 1819 aa17.77■□□□□ 0.44
CDCA3-207ENST00000538862 NCAPD2Q15021 1401 aa17.77■□□□□ 0.44
CDCA3-207ENST00000538862 NUP188Q5SRE5 1749 aa17.77■□□□□ 0.44
CDCA3-207ENST00000538862 DOT1LQ8TEK3 1739 aa17.77■□□□□ 0.44
CDCA3-207ENST00000538862 PSDA5PKW4 1024 aaPredicted RBP17.77■□□□□ 0.44
CDCA3-207ENST00000538862 KLHL40Q2TBA0 621 aa17.77■□□□□ 0.44
CDCA3-207ENST00000538862 BTAF1O14981 1849 aa17.76■□□□□ 0.43
CDCA3-207ENST00000538862 SRCIN1Q9C0H9 1055 aa17.76■□□□□ 0.43
CDCA3-207ENST00000538862 RRAGDQ9NQL2 400 aaPredicted RBP17.76■□□□□ 0.43
CDCA3-207ENST00000538862 IBTKQ9P2D0 1353 aaPredicted RBP17.76■□□□□ 0.43
CDCA3-207ENST00000538862 EXOC6BQ9Y2D4 811 aa17.76■□□□□ 0.43
CDCA3-207ENST00000538862 STAP2Q9UGK3 403 aa17.75■□□□□ 0.43
CDCA3-207ENST00000538862 PKD1L3Q7Z443 1732 aa17.75■□□□□ 0.43
CDCA3-207ENST00000538862 AK9Q5TCS8 1911 aa17.75■□□□□ 0.43
CDCA3-207ENST00000538862 MX1P20591 662 aa17.74■□□□□ 0.43
CDCA3-207ENST00000538862 SYTL4Q96C24 671 aaPredicted RBP17.74■□□□□ 0.43
CDCA3-207ENST00000538862 PNMA6EA0A0J9YXQ4 647 aa17.74■□□□□ 0.43
CDCA3-207ENST00000538862 RGPD3A6NKT7 1758 aaPredicted RBP17.73■□□□□ 0.43
CDCA3-207ENST00000538862 RGPD4Q7Z3J3 1758 aa17.73■□□□□ 0.43
CDCA3-207ENST00000538862 AOX1Q06278 1338 aa17.73■□□□□ 0.43
CDCA3-207ENST00000538862 PLSCR1O15162 318 aa17.73■□□□□ 0.43
CDCA3-207ENST00000538862 CYP27B1O15528 508 aa17.73■□□□□ 0.43
CDCA3-207ENST00000538862 MCM2P49736 904 aa17.73■□□□□ 0.43
CDCA3-207ENST00000538862 GAS2L3Q86XJ1 694 aa17.73■□□□□ 0.43
CDCA3-207ENST00000538862 ESYT1Q9BSJ8 1104 aa17.73■□□□□ 0.43
CDCA3-207ENST00000538862 CHMP4AQ9BY43 222 aa17.73■□□□□ 0.43
CDCA3-207ENST00000538862 PCDH11XQ9BZA7 1347 aa17.72■□□□□ 0.43
CDCA3-207ENST00000538862 PCDH11YQ9BZA8 1340 aa17.72■□□□□ 0.43
CDCA3-207ENST00000538862 PRIM1P49642 420 aaKnown RBP17.72■□□□□ 0.43
CDCA3-207ENST00000538862 R3HDM1Q15032 1099 aaKnown RBP17.72■□□□□ 0.43
CDCA3-207ENST00000538862 PROM2Q8N271 834 aa17.72■□□□□ 0.43
CDCA3-207ENST00000538862 USP44Q9H0E7 712 aa17.72■□□□□ 0.43
CDCA3-207ENST00000538862 DDX49Q9Y6V7 483 aaKnown RBP17.72■□□□□ 0.43
CDCA3-207ENST00000538862 MCCP23508 829 aa17.72■□□□□ 0.43
CDCA3-207ENST00000538862 ANAPC15P60006 121 aa17.72■□□□□ 0.43
CDCA3-207ENST00000538862 LRRFIP2Q9Y608 721 aaKnown RBP17.72■□□□□ 0.43
CDCA3-207ENST00000538862 CEMIPQ8WUJ3 1361 aa17.71■□□□□ 0.43
CDCA3-207ENST00000538862 EPB41L2O43491 1005 aaKnown RBP17.71■□□□□ 0.43
CDCA3-207ENST00000538862 IL17RAQ96F46 866 aa17.71■□□□□ 0.43
CDCA3-207ENST00000538862 UBTFL1P0CB47 393 aaPredicted RBP17.7■□□□□ 0.42
CDCA3-207ENST00000538862 CHMLP26374 656 aa17.7■□□□□ 0.42
CDCA3-207ENST00000538862 SSH3Q8TE77 659 aa17.7■□□□□ 0.42
CDCA3-207ENST00000538862 NECTIN2Q92692 538 aa17.7■□□□□ 0.42
CDCA3-207ENST00000538862 RAB11FIP3O75154 756 aa17.7■□□□□ 0.42
CDCA3-207ENST00000538862 HOXB7P09629 217 aa17.7■□□□□ 0.42
CDCA3-207ENST00000538862 CLCN1P35523 988 aa17.7■□□□□ 0.42
CDCA3-207ENST00000538862 HDGFL1Q5TGJ6 251 aa17.7■□□□□ 0.42
CDCA3-207ENST00000538862 TOGARAM1Q9Y4F4 1720 aa17.69■□□□□ 0.42
CDCA3-207ENST00000538862 TXNRD1Q16881 649 aa17.69■□□□□ 0.42
CDCA3-207ENST00000538862 MCTP1Q6DN14 999 aa17.69■□□□□ 0.42
CDCA3-207ENST00000538862 SPG7Q9UQ90 795 aa17.69■□□□□ 0.42
CDCA3-207ENST00000538862 LMBRD1Q9NUN5 540 aa17.68■□□□□ 0.42
CDCA3-207ENST00000538862 NEK4P51957 841 aa17.68■□□□□ 0.42
CDCA3-207ENST00000538862 ZGPATQ8N5A5 531 aaKnown RBP17.68■□□□□ 0.42
CDCA3-207ENST00000538862 ITGB4P16144 1822 aa17.67■□□□□ 0.42
CDCA3-207ENST00000538862 ZNF445P59923 1031 aa17.67■□□□□ 0.42
CDCA3-207ENST00000538862 POLA2Q14181 598 aa17.67■□□□□ 0.42
CDCA3-207ENST00000538862 TRIM6-TRIM34B2RNG4 842 aa17.66■□□□□ 0.42
CDCA3-207ENST00000538862 PKP1Q13835 747 aa17.66■□□□□ 0.42
CDCA3-207ENST00000538862 TSHZ3Q63HK5 1081 aa17.66■□□□□ 0.42
CDCA3-207ENST00000538862 EIF4A1P60842 406 aaKnown RBP17.66■□□□□ 0.42
CDCA3-207ENST00000538862 CUL4AQ13619 759 aa17.66■□□□□ 0.42
CDCA3-207ENST00000538862 RILPL2Q969X0 211 aa17.66■□□□□ 0.42
CDCA3-207ENST00000538862 TMX3Q96JJ7 454 aa17.66■□□□□ 0.42
CDCA3-207ENST00000538862 PHAXQ9H814 394 aaKnown RBP17.66■□□□□ 0.42
CDCA3-207ENST00000538862 ZDHHC9Q9Y397 364 aa17.66■□□□□ 0.42
CDCA3-207ENST00000538862 KDM3BQ7LBC6 1761 aa17.66■□□□□ 0.42
CDCA3-207ENST00000538862 KCNQ4P56696 695 aa17.65■□□□□ 0.42
CDCA3-207ENST00000538862 NBPF14Q5TI25 921 aa17.65■□□□□ 0.42
CDCA3-207ENST00000538862 INTS4Q96HW7 963 aaKnown RBP17.65■□□□□ 0.42
CDCA3-207ENST00000538862 PHKG2P15735 406 aa17.64■□□□□ 0.42
CDCA3-207ENST00000538862 MPRIPQ6WCQ1 1025 aa17.64■□□□□ 0.42
CDCA3-207ENST00000538862 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.64■□□□□ 0.42
CDCA3-207ENST00000538862 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.64■□□□□ 0.42
CDCA3-207ENST00000538862 PPP1R42Q7Z4L9 355 aa17.64■□□□□ 0.41
CDCA3-207ENST00000538862 IFNL2Q8IZJ0 200 aa17.64■□□□□ 0.41
CDCA3-207ENST00000538862 TRIM44Q96DX7 344 aaPredicted RBP17.64■□□□□ 0.41
CDCA3-207ENST00000538862 ANO2Q9NQ90 1003 aa17.64■□□□□ 0.41
CDCA3-207ENST00000538862 CCDC173Q0VFZ6 552 aa17.63■□□□□ 0.41
CDCA3-207ENST00000538862 PPP1R9BQ96SB3 815 aa17.63■□□□□ 0.41
CDCA3-207ENST00000538862 LRRC4BQ9NT99 713 aa17.63■□□□□ 0.41
CDCA3-207ENST00000538862 ESPNB1AK53 854 aa17.62■□□□□ 0.41
CDCA3-207ENST00000538862 PLEKHO1Q53GL0 409 aaPredicted RBP17.62■□□□□ 0.41
CDCA3-207ENST00000538862 ZNF530Q6P9A1 599 aaPredicted RBP17.62■□□□□ 0.41
CDCA3-207ENST00000538862 KIF1BPQ96EK5 621 aa17.62■□□□□ 0.41
CDCA3-207ENST00000538862 SURF6O75683 361 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms