RNA–Protein interactions for RNA: ENST00000538725.1

MSRB3-208, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 4

Gene MSRB3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-208ENST00000538725 NMRK2Q9NPI5 230 aa26.7■■□□□ 1.86
MSRB3-208ENST00000538725 LMNB1P20700 586 aa26.69■■□□□ 1.86
MSRB3-208ENST00000538725 RASSF7Q02833 373 aa26.69■■□□□ 1.86
MSRB3-208ENST00000538725 NBPF5PQ86XG9 351 aaPredicted RBP26.69■■□□□ 1.86
MSRB3-208ENST00000538725 KDM2BQ8NHM5 1336 aa26.68■■□□□ 1.86
MSRB3-208ENST00000538725 CEP350Q5VT06 3117 aa26.68■■□□□ 1.86
MSRB3-208ENST00000538725 TOMM70O94826 608 aa26.68■■□□□ 1.86
MSRB3-208ENST00000538725 HSPA6P17066 643 aa26.68■■□□□ 1.86
MSRB3-208ENST00000538725 NIP7Q9Y221 180 aaKnown RBP eCLIP26.68■■□□□ 1.86
MSRB3-208ENST00000538725 LAMB4A4D0S4 1761 aa26.68■■□□□ 1.86
MSRB3-208ENST00000538725 TMPOP42166 694 aaKnown RBP26.67■■□□□ 1.86
MSRB3-208ENST00000538725 TPTE2Q6XPS3 522 aa26.67■■□□□ 1.86
MSRB3-208ENST00000538725 SRGNP10124 158 aa26.66■■□□□ 1.86
MSRB3-208ENST00000538725 HLFQ16534 295 aa26.66■■□□□ 1.86
MSRB3-208ENST00000538725 STYK1Q6J9G0 422 aa26.66■■□□□ 1.86
MSRB3-208ENST00000538725 CNKSR1Q969H4 720 aa26.66■■□□□ 1.86
MSRB3-208ENST00000538725 RRP7AQ9Y3A4 280 aaKnown RBP26.66■■□□□ 1.86
MSRB3-208ENST00000538725 ZC3H4Q9UPT8 1303 aaKnown RBP26.65■■□□□ 1.86
MSRB3-208ENST00000538725 C21orf2O43822 256 aa26.65■■□□□ 1.86
MSRB3-208ENST00000538725 PRELPP51888 382 aa26.65■■□□□ 1.86
MSRB3-208ENST00000538725 NGEFQ8N5V2 710 aa26.65■■□□□ 1.86
MSRB3-208ENST00000538725 MASTLQ96GX5 879 aa26.65■■□□□ 1.86
MSRB3-208ENST00000538725 TSPYL4Q9UJ04 414 aa26.65■■□□□ 1.86
MSRB3-208ENST00000538725 ERVV-1B6SEH8 477 aa26.64■■□□□ 1.86
MSRB3-208ENST00000538725 NFKBIEO00221 500 aa26.64■■□□□ 1.86
MSRB3-208ENST00000538725 LMOD3Q0VAK6 560 aa26.64■■□□□ 1.86
MSRB3-208ENST00000538725 BABAM1Q9NWV8 329 aa26.64■■□□□ 1.86
MSRB3-208ENST00000538725 COL11A2P13942 1736 aaPredicted RBP26.64■■□□□ 1.85
MSRB3-208ENST00000538725 ZNF219Q9P2Y4 722 aaPredicted RBP26.63■■□□□ 1.85
MSRB3-208ENST00000538725 CCDC88AQ3V6T2 1871 aa26.63■■□□□ 1.85
MSRB3-208ENST00000538725 RRAGCQ9HB90 399 aa26.62■■□□□ 1.85
MSRB3-208ENST00000538725 KLRG2A4D1S0 409 aaPredicted RBP26.61■■□□□ 1.85
MSRB3-208ENST00000538725 MYL6BP14649 208 aa26.61■■□□□ 1.85
MSRB3-208ENST00000538725 C16orf71Q8IYS4 520 aaPredicted RBP26.61■■□□□ 1.85
MSRB3-208ENST00000538725 FAM177BA6PVY3 158 aa26.6■■□□□ 1.85
MSRB3-208ENST00000538725 WDR43Q15061 677 aaKnown RBP eCLIP26.6■■□□□ 1.85
MSRB3-208ENST00000538725 PRPF40BQ6NWY9 871 aaKnown RBP26.6■■□□□ 1.85
MSRB3-208ENST00000538725 KIF6Q6ZMV9 814 aa26.6■■□□□ 1.85
MSRB3-208ENST00000538725 TTLL7Q6ZT98 887 aa26.6■■□□□ 1.85
MSRB3-208ENST00000538725 CCDC146Q8IYE0 955 aa26.6■■□□□ 1.85
MSRB3-208ENST00000538725 CNKSR2Q8WXI2 1034 aa26.6■■□□□ 1.85
MSRB3-208ENST00000538725 RUNDC1Q96C34 613 aa26.6■■□□□ 1.85
MSRB3-208ENST00000538725 ERBB4Q15303 1308 aa26.6■■□□□ 1.85
MSRB3-208ENST00000538725 MAP3K15Q6ZN16 1313 aa26.6■■□□□ 1.85
MSRB3-208ENST00000538725 NPR1P16066 1061 aa26.59■■□□□ 1.85
MSRB3-208ENST00000538725 NEUROD2Q15784 382 aa26.59■■□□□ 1.85
MSRB3-208ENST00000538725 RBM46Q8TBY0 533 aaKnown RBP26.59■■□□□ 1.85
MSRB3-208ENST00000538725 SLX4Q8IY92 1834 aa26.59■■□□□ 1.85
MSRB3-208ENST00000538725 FER1L6Q2WGJ9 1857 aa26.58■■□□□ 1.85
MSRB3-208ENST00000538725 GLTPD2A6NH11 291 aa26.58■■□□□ 1.85
MSRB3-208ENST00000538725 GTF2E1P29083 439 aaPredicted RBP26.58■■□□□ 1.85
MSRB3-208ENST00000538725 SOGA3Q5TF21 947 aa26.58■■□□□ 1.85
MSRB3-208ENST00000538725 PRKRIP1Q9H875 184 aaPredicted RBP26.58■■□□□ 1.85
MSRB3-208ENST00000538725 NUP98P52948 1817 aa26.58■■□□□ 1.84
MSRB3-208ENST00000538725 NYXQ9GZU5 481 aa26.57■■□□□ 1.84
MSRB3-208ENST00000538725 ADAMTS8Q9UP79 889 aa26.57■■□□□ 1.84
MSRB3-208ENST00000538725 CACNA1SQ13698 1873 aa26.56■■□□□ 1.84
MSRB3-208ENST00000538725 EIF2S2P20042 333 aaKnown RBP26.56■■□□□ 1.84
MSRB3-208ENST00000538725 LTBP3Q9NS15 1303 aa26.56■■□□□ 1.84
MSRB3-208ENST00000538725 C7orf43Q8WVR3 580 aa26.55■■□□□ 1.84
MSRB3-208ENST00000538725 TNRC6CQ9HCJ0 1690 aaKnown RBP26.54■■□□□ 1.84
MSRB3-208ENST00000538725 ARFGEF2Q9Y6D5 1785 aa26.54■■□□□ 1.84
MSRB3-208ENST00000538725 APLP1P51693 650 aa26.54■■□□□ 1.84
MSRB3-208ENST00000538725 ERFEQ4G0M1 354 aa26.54■■□□□ 1.84
MSRB3-208ENST00000538725 TAOK3Q9H2K8 898 aa26.54■■□□□ 1.84
MSRB3-208ENST00000538725 ZBTB3Q9H5J0 574 aa26.54■■□□□ 1.84
MSRB3-208ENST00000538725 TRIM35Q9UPQ4 493 aa26.54■■□□□ 1.84
MSRB3-208ENST00000538725 PDIA6Q15084 440 aa26.53■■□□□ 1.84
MSRB3-208ENST00000538725 NCBP3Q53F19 620 aaKnown RBP26.53■■□□□ 1.84
MSRB3-208ENST00000538725 DPY19L2Q6NUT2 758 aa26.53■■□□□ 1.84
MSRB3-208ENST00000538725 CHL1O00533 1208 aa26.52■■□□□ 1.84
MSRB3-208ENST00000538725 VEGFAP15692 232 aaPredicted RBP26.52■■□□□ 1.84
MSRB3-208ENST00000538725 ALDH1B1P30837 517 aa26.52■■□□□ 1.84
MSRB3-208ENST00000538725 FSTL1Q12841 308 aa26.52■■□□□ 1.84
MSRB3-208ENST00000538725 GIGYF2Q6Y7W6 1299 aaKnown RBP26.52■■□□□ 1.84
MSRB3-208ENST00000538725 DICER1Q9UPY3 1922 aaKnown RBP26.52■■□□□ 1.84
MSRB3-208ENST00000538725 GPTP24298 496 aa26.51■■□□□ 1.83
MSRB3-208ENST00000538725 LRP10Q7Z4F1 713 aa26.51■■□□□ 1.83
MSRB3-208ENST00000538725 NUTM1Q86Y26 1132 aa26.51■■□□□ 1.83
MSRB3-208ENST00000538725 ZNF34Q8IZ26 560 aa26.51■■□□□ 1.83
MSRB3-208ENST00000538725 TIAM2Q8IVF5 1701 aa26.51■■□□□ 1.83
MSRB3-208ENST00000538725 LAS1LQ9Y4W2 734 aaKnown RBP26.5■■□□□ 1.83
MSRB3-208ENST00000538725 CCDC93Q567U6 631 aa26.49■■□□□ 1.83
MSRB3-208ENST00000538725 SUSD4Q5VX71 490 aa26.49■■□□□ 1.83
MSRB3-208ENST00000538725 UBN2Q6ZU65 1347 aa26.48■■□□□ 1.83
MSRB3-208ENST00000538725 PROSER3Q2NL68 480 aa26.47■■□□□ 1.83
MSRB3-208ENST00000538725 CRY2Q49AN0 593 aa26.47■■□□□ 1.83
MSRB3-208ENST00000538725 PPP1R42Q7Z4L9 355 aa26.47■■□□□ 1.83
MSRB3-208ENST00000538725 IBTKQ9P2D0 1353 aaPredicted RBP26.46■■□□□ 1.83
MSRB3-208ENST00000538725 ANXA1P04083 346 aa26.46■■□□□ 1.83
MSRB3-208ENST00000538725 PARP10Q53GL7 1025 aa26.46■■□□□ 1.83
MSRB3-208ENST00000538725 RTKN2Q8IZC4 609 aa26.46■■□□□ 1.83
MSRB3-208ENST00000538725 NECTIN2Q92692 538 aa26.46■■□□□ 1.83
MSRB3-208ENST00000538725 COPS6Q7L5N1 327 aa26.45■■□□□ 1.82
MSRB3-208ENST00000538725 SMC1BQ8NDV3 1235 aa26.45■■□□□ 1.82
MSRB3-208ENST00000538725 ABCC12Q96J65 1359 aa26.45■■□□□ 1.82
MSRB3-208ENST00000538725 POTECB2RU33 542 aa26.44■■□□□ 1.82
MSRB3-208ENST00000538725 NTSR2O95665 410 aa26.44■■□□□ 1.82
MSRB3-208ENST00000538725 FKBP4Q02790 459 aaKnown RBP eCLIP26.44■■□□□ 1.82
MSRB3-208ENST00000538725 KRT24Q2M2I5 525 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms