RNA–Protein interactions for RNA: ENST00000538258.1

PGA3-204, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

TSL 2 BASIC

Gene PGA3, Length 867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-204ENST00000538258 MYH16Q9H6N6 1097 aa11.73□□□□□ -0.53
PGA3-204ENST00000538258 DDX21Q9NR30 783 aaKnown RBP eCLIP11.73□□□□□ -0.53
PGA3-204ENST00000538258 FANCIQ9NVI1 1328 aa11.73□□□□□ -0.53
PGA3-204ENST00000538258 CHPF2Q9P2E5 772 aa11.73□□□□□ -0.53
PGA3-204ENST00000538258 ZNF652Q9Y2D9 606 aa11.73□□□□□ -0.53
PGA3-204ENST00000538258 CD2APQ9Y5K6 639 aa11.73□□□□□ -0.53
PGA3-204ENST00000538258 MAP3K15Q6ZN16 1313 aa11.72□□□□□ -0.53
PGA3-204ENST00000538258 ZNF521Q96K83 1311 aa11.72□□□□□ -0.53
PGA3-204ENST00000538258 CLEC4GQ6UXB4 293 aa11.72□□□□□ -0.53
PGA3-204ENST00000538258 TTLL7Q6ZT98 887 aa11.72□□□□□ -0.53
PGA3-204ENST00000538258 TSPYL6Q8N831 410 aa11.72□□□□□ -0.53
PGA3-204ENST00000538258 NLGN2Q8NFZ4 835 aa11.72□□□□□ -0.53
PGA3-204ENST00000538258 CHMP4AQ9BY43 222 aa11.72□□□□□ -0.53
PGA3-204ENST00000538258 DBF4Q9UBU7 674 aaPredicted RBP11.72□□□□□ -0.53
PGA3-204ENST00000538258 KIF13BQ9NQT8 1826 aa11.72□□□□□ -0.53
PGA3-204ENST00000538258 UTRNP46939 3433 aa11.72□□□□□ -0.53
PGA3-204ENST00000538258 ERVV-1B6SEH8 477 aa11.71□□□□□ -0.53
PGA3-204ENST00000538258 RGL2O15211 777 aa11.71□□□□□ -0.53
PGA3-204ENST00000538258 SERPINB2P05120 415 aa11.71□□□□□ -0.53
PGA3-204ENST00000538258 GOLGA2Q08379 1002 aa11.71□□□□□ -0.53
PGA3-204ENST00000538258 AIMP1Q12904 312 aaKnown RBP11.71□□□□□ -0.53
PGA3-204ENST00000538258 TWISTNBQ3B726 338 aaPredicted RBP11.71□□□□□ -0.53
PGA3-204ENST00000538258 LRP10Q7Z4F1 713 aa11.71□□□□□ -0.53
PGA3-204ENST00000538258 SETDB2Q96T68 719 aa11.71□□□□□ -0.53
PGA3-204ENST00000538258 ZBTB3Q9H5J0 574 aa11.71□□□□□ -0.53
PGA3-204ENST00000538258 SPINK5Q9NQ38 1064 aaPredicted RBP11.71□□□□□ -0.53
PGA3-204ENST00000538258 CEP350Q5VT06 3117 aa11.71□□□□□ -0.54
PGA3-204ENST00000538258 C10orf71Q711Q0 1435 aa11.7□□□□□ -0.54
PGA3-204ENST00000538258 CARMIL3Q8ND23 1372 aa11.7□□□□□ -0.54
PGA3-204ENST00000538258 NRXN2Q9P2S2 1712 aa11.7□□□□□ -0.54
PGA3-204ENST00000538258 HLFQ16534 295 aa11.7□□□□□ -0.54
PGA3-204ENST00000538258 CCDC30Q5VVM6 783 aa11.7□□□□□ -0.54
PGA3-204ENST00000538258 COPS6Q7L5N1 327 aa11.7□□□□□ -0.54
PGA3-204ENST00000538258 XAGE3Q8WTP9 111 aa11.7□□□□□ -0.54
PGA3-204ENST00000538258 HYPKQ9NX55 129 aa11.7□□□□□ -0.54
PGA3-204ENST00000538258 N4BP2Q86UW6 1770 aaPredicted RBP11.69□□□□□ -0.54
PGA3-204ENST00000538258 NPHP1O15259 732 aa11.69□□□□□ -0.54
PGA3-204ENST00000538258 EXOSC9Q06265 439 aaKnown RBP11.69□□□□□ -0.54
PGA3-204ENST00000538258 NIP7Q9Y221 180 aaKnown RBP eCLIP11.69□□□□□ -0.54
PGA3-204ENST00000538258 GTF3C3Q9Y5Q9 886 aa11.69□□□□□ -0.54
PGA3-204ENST00000538258 CACNA1FO60840 1977 aa11.68□□□□□ -0.54
PGA3-204ENST00000538258 E9PSI1 815 aa11.68□□□□□ -0.54
PGA3-204ENST00000538258 GIGYF2Q6Y7W6 1299 aaKnown RBP11.68□□□□□ -0.54
PGA3-204ENST00000538258 NBPF5PQ86XG9 351 aaPredicted RBP11.68□□□□□ -0.54
PGA3-204ENST00000538258 STK31Q9BXU1 1019 aa11.68□□□□□ -0.54
PGA3-204ENST00000538258 KIAA1551Q9HCM1 1747 aa11.67□□□□□ -0.54
PGA3-204ENST00000538258 FAM177BA6PVY3 158 aa11.67□□□□□ -0.54
PGA3-204ENST00000538258 TCERG1O14776 1098 aaKnown RBP11.67□□□□□ -0.54
PGA3-204ENST00000538258 GPTP24298 496 aa11.67□□□□□ -0.54
PGA3-204ENST00000538258 TGFB2P61812 414 aa11.67□□□□□ -0.54
PGA3-204ENST00000538258 PRR5LQ6MZQ0 368 aa11.67□□□□□ -0.54
PGA3-204ENST00000538258 CNBD1Q8NA66 436 aa11.67□□□□□ -0.54
PGA3-204ENST00000538258 PXDNLA1KZ92 1463 aa11.67□□□□□ -0.54
PGA3-204ENST00000538258 ATP10DQ9P241 1426 aa11.67□□□□□ -0.54
PGA3-204ENST00000538258 ANKRD36CQ5JPF3 1778 aa11.67□□□□□ -0.54
PGA3-204ENST00000538258 ANKRD31Q8N7Z5 1873 aa11.66□□□□□ -0.54
PGA3-204ENST00000538258 A0A0G2JLW4 131 aa11.66□□□□□ -0.54
PGA3-204ENST00000538258 VAMP4O75379 141 aa11.66□□□□□ -0.54
PGA3-204ENST00000538258 DPEP1P16444 411 aa11.66□□□□□ -0.54
PGA3-204ENST00000538258 ST5P78524 1137 aa11.66□□□□□ -0.54
PGA3-204ENST00000538258 HNRNPUQ00839 825 aaKnown RBP eCLIP11.66□□□□□ -0.54
PGA3-204ENST00000538258 SLFN5Q08AF3 891 aa11.66□□□□□ -0.54
PGA3-204ENST00000538258 ANKRD13DQ6ZTN6 518 aa11.66□□□□□ -0.54
PGA3-204ENST00000538258 CCDC24Q8N4L8 307 aa11.66□□□□□ -0.54
PGA3-204ENST00000538258 PLBD2Q8NHP8 589 aa11.66□□□□□ -0.54
PGA3-204ENST00000538258 PHAXQ9H814 394 aaKnown RBP11.66□□□□□ -0.54
PGA3-204ENST00000538258 WWC3Q9ULE0 1092 aa11.66□□□□□ -0.54
PGA3-204ENST00000538258 ARFGEF2Q9Y6D5 1785 aa11.65□□□□□ -0.54
PGA3-204ENST00000538258 HSPA6P17066 643 aa11.65□□□□□ -0.54
PGA3-204ENST00000538258 GTF2E1P29083 439 aaPredicted RBP11.65□□□□□ -0.54
PGA3-204ENST00000538258 HSP90AB3PQ58FF7 597 aa11.65□□□□□ -0.54
PGA3-204ENST00000538258 TPTE2Q6XPS3 522 aa11.65□□□□□ -0.54
PGA3-204ENST00000538258 ZNF34Q8IZ26 560 aa11.65□□□□□ -0.54
PGA3-204ENST00000538258 CDCA7LQ96GN5 454 aa11.65□□□□□ -0.54
PGA3-204ENST00000538258 UBN2Q6ZU65 1347 aa11.64□□□□□ -0.55
PGA3-204ENST00000538258 BRCA1P38398 1863 aaKnown RBP11.64□□□□□ -0.55
PGA3-204ENST00000538258 DDX58O95786 925 aaKnown RBP11.64□□□□□ -0.55
PGA3-204ENST00000538258 SLC4A2P04920 1241 aa11.64□□□□□ -0.55
PGA3-204ENST00000538258 CHRNA5P30532 468 aa11.64□□□□□ -0.55
PGA3-204ENST00000538258 TCIRG1Q13488 830 aa11.64□□□□□ -0.55
PGA3-204ENST00000538258 PARP10Q53GL7 1025 aa11.64□□□□□ -0.55
PGA3-204ENST00000538258 RIC3Q7Z5B4 369 aa11.64□□□□□ -0.55
PGA3-204ENST00000538258 BRIP1Q9BX63 1249 aa11.64□□□□□ -0.55
PGA3-204ENST00000538258 NYXQ9GZU5 481 aa11.64□□□□□ -0.55
PGA3-204ENST00000538258 PDE6BP35913 854 aa11.63□□□□□ -0.55
PGA3-204ENST00000538258 SUSD4Q5VX71 490 aa11.63□□□□□ -0.55
PGA3-204ENST00000538258 PPP1R42Q7Z4L9 355 aa11.63□□□□□ -0.55
PGA3-204ENST00000538258 C2CD5Q86YS7 1000 aa11.63□□□□□ -0.55
PGA3-204ENST00000538258 DLEC1Q9Y238 1755 aa11.63□□□□□ -0.55
PGA3-204ENST00000538258 H0YIN7 160 aa11.62□□□□□ -0.55
PGA3-204ENST00000538258 YBX3P16989 372 aaKnown RBP eCLIP11.62□□□□□ -0.55
PGA3-204ENST00000538258 KCNA3P22001 575 aa11.62□□□□□ -0.55
PGA3-204ENST00000538258 G2E3Q7L622 706 aa11.62□□□□□ -0.55
PGA3-204ENST00000538258 NUTM1Q86Y26 1132 aa11.62□□□□□ -0.55
PGA3-204ENST00000538258 UTP14AQ9BVJ6 771 aaKnown RBP11.62□□□□□ -0.55
PGA3-204ENST00000538258 PIM2Q9P1W9 311 aa11.62□□□□□ -0.55
PGA3-204ENST00000538258 PDZRN3Q9UPQ7 1066 aa11.62□□□□□ -0.55
PGA3-204ENST00000538258 BCS1LQ9Y276 419 aa11.62□□□□□ -0.55
PGA3-204ENST00000538258 IBTKQ9P2D0 1353 aaPredicted RBP11.62□□□□□ -0.55
PGA3-204ENST00000538258 COL11A2P13942 1736 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms