RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 LMOD3Q0VAK6 560 aa19.64■□□□□ 0.73
LRRK1-211ENST00000538064 DICER1Q9UPY3 1922 aaKnown RBP19.64■□□□□ 0.73
LRRK1-211ENST00000538064 SLX4Q8IY92 1834 aa19.63■□□□□ 0.73
LRRK1-211ENST00000538064 TMPOP42166 694 aaKnown RBP19.63■□□□□ 0.73
LRRK1-211ENST00000538064 ST5P78524 1137 aa19.63■□□□□ 0.73
LRRK1-211ENST00000538064 PRKRIP1Q9H875 184 aaPredicted RBP19.62■□□□□ 0.73
LRRK1-211ENST00000538064 ERBB4Q15303 1308 aa19.61■□□□□ 0.73
LRRK1-211ENST00000538064 KIF3CO14782 793 aa19.61■□□□□ 0.73
LRRK1-211ENST00000538064 NPHP1O15259 732 aa19.61■□□□□ 0.73
LRRK1-211ENST00000538064 WDR43Q15061 677 aaKnown RBP eCLIP19.61■□□□□ 0.73
LRRK1-211ENST00000538064 CCDC24Q8N4L8 307 aa19.61■□□□□ 0.73
LRRK1-211ENST00000538064 BABAM1Q9NWV8 329 aa19.61■□□□□ 0.73
LRRK1-211ENST00000538064 RNF181Q9P0P0 153 aa19.61■□□□□ 0.73
LRRK1-211ENST00000538064 TSPYL4Q9UJ04 414 aa19.61■□□□□ 0.73
LRRK1-211ENST00000538064 ANKRD36CQ5JPF3 1778 aa19.61■□□□□ 0.73
LRRK1-211ENST00000538064 ZNF316A6NFI3 1004 aaPredicted RBP19.6■□□□□ 0.73
LRRK1-211ENST00000538064 RASSF7Q02833 373 aa19.6■□□□□ 0.73
LRRK1-211ENST00000538064 NBPF5PQ86XG9 351 aaPredicted RBP19.6■□□□□ 0.73
LRRK1-211ENST00000538064 ZC3H4Q9UPT8 1303 aaKnown RBP19.59■□□□□ 0.73
LRRK1-211ENST00000538064 CCDC146Q8IYE0 955 aa19.59■□□□□ 0.73
LRRK1-211ENST00000538064 ZNF622Q969S3 477 aaKnown RBP eCLIP19.59■□□□□ 0.73
LRRK1-211ENST00000538064 RUNDC1Q96C34 613 aa19.59■□□□□ 0.73
LRRK1-211ENST00000538064 NIP7Q9Y221 180 aaKnown RBP eCLIP19.59■□□□□ 0.73
LRRK1-211ENST00000538064 STYK1Q6J9G0 422 aa19.58■□□□□ 0.72
LRRK1-211ENST00000538064 RRP7AQ9Y3A4 280 aaKnown RBP19.58■□□□□ 0.72
LRRK1-211ENST00000538064 MAP3K15Q6ZN16 1313 aa19.57■□□□□ 0.72
LRRK1-211ENST00000538064 ERVV-1B6SEH8 477 aa19.57■□□□□ 0.72
LRRK1-211ENST00000538064 SRGNP10124 158 aa19.57■□□□□ 0.72
LRRK1-211ENST00000538064 LMNB1P20700 586 aa19.57■□□□□ 0.72
LRRK1-211ENST00000538064 HLFQ16534 295 aa19.57■□□□□ 0.72
LRRK1-211ENST00000538064 KIF6Q6ZMV9 814 aa19.57■□□□□ 0.72
LRRK1-211ENST00000538064 IBTKQ9P2D0 1353 aaPredicted RBP19.57■□□□□ 0.72
LRRK1-211ENST00000538064 NFKBIEO00221 500 aa19.56■□□□□ 0.72
LRRK1-211ENST00000538064 CNKSR1Q969H4 720 aa19.56■□□□□ 0.72
LRRK1-211ENST00000538064 MASTLQ96GX5 879 aa19.56■□□□□ 0.72
LRRK1-211ENST00000538064 MYL6BP14649 208 aa19.55■□□□□ 0.72
LRRK1-211ENST00000538064 PRELPP51888 382 aa19.55■□□□□ 0.72
LRRK1-211ENST00000538064 TPTE2Q6XPS3 522 aa19.55■□□□□ 0.72
LRRK1-211ENST00000538064 NMRK2Q9NPI5 230 aa19.55■□□□□ 0.72
LRRK1-211ENST00000538064 ADAMTS8Q9UP79 889 aa19.55■□□□□ 0.72
LRRK1-211ENST00000538064 TRIM35Q9UPQ4 493 aa19.55■□□□□ 0.72
LRRK1-211ENST00000538064 KDM2BQ8NHM5 1336 aa19.54■□□□□ 0.72
LRRK1-211ENST00000538064 RIC1Q4ADV7 1423 aa19.54■□□□□ 0.72
LRRK1-211ENST00000538064 NEUROD2Q15784 382 aa19.54■□□□□ 0.72
LRRK1-211ENST00000538064 TTLL7Q6ZT98 887 aa19.54■□□□□ 0.72
LRRK1-211ENST00000538064 NGEFQ8N5V2 710 aa19.54■□□□□ 0.72
LRRK1-211ENST00000538064 KLRG2A4D1S0 409 aaPredicted RBP19.53■□□□□ 0.72
LRRK1-211ENST00000538064 C21orf2O43822 256 aa19.53■□□□□ 0.72
LRRK1-211ENST00000538064 PRPF40BQ6NWY9 871 aaKnown RBP19.53■□□□□ 0.72
LRRK1-211ENST00000538064 LRP10Q7Z4F1 713 aa19.53■□□□□ 0.72
LRRK1-211ENST00000538064 ABCC12Q96J65 1359 aa19.53■□□□□ 0.72
LRRK1-211ENST00000538064 LTBP3Q9NS15 1303 aa19.52■□□□□ 0.72
LRRK1-211ENST00000538064 NYXQ9GZU5 481 aa19.52■□□□□ 0.72
LRRK1-211ENST00000538064 WDR90Q96KV7 1748 aa19.51■□□□□ 0.71
LRRK1-211ENST00000538064 FAM177BA6PVY3 158 aa19.51■□□□□ 0.71
LRRK1-211ENST00000538064 CHL1O00533 1208 aa19.51■□□□□ 0.71
LRRK1-211ENST00000538064 TOMM70O94826 608 aa19.51■□□□□ 0.71
LRRK1-211ENST00000538064 NPR1P16066 1061 aa19.51■□□□□ 0.71
LRRK1-211ENST00000538064 HSPA6P17066 643 aa19.51■□□□□ 0.71
LRRK1-211ENST00000538064 PDIA6Q15084 440 aa19.51■□□□□ 0.71
LRRK1-211ENST00000538064 SOGA3Q5TF21 947 aa19.51■□□□□ 0.71
LRRK1-211ENST00000538064 ZBTB3Q9H5J0 574 aa19.51■□□□□ 0.71
LRRK1-211ENST00000538064 UBN2Q6ZU65 1347 aa19.51■□□□□ 0.71
LRRK1-211ENST00000538064 EIF2S2P20042 333 aaKnown RBP19.5■□□□□ 0.71
LRRK1-211ENST00000538064 TAOK3Q9H2K8 898 aa19.5■□□□□ 0.71
LRRK1-211ENST00000538064 ZNF219Q9P2Y4 722 aaPredicted RBP19.5■□□□□ 0.71
LRRK1-211ENST00000538064 PROSER3Q2NL68 480 aa19.49■□□□□ 0.71
LRRK1-211ENST00000538064 GIGYF2Q6Y7W6 1299 aaKnown RBP19.49■□□□□ 0.71
LRRK1-211ENST00000538064 LAMB2P55268 1798 aa19.49■□□□□ 0.71
LRRK1-211ENST00000538064 GTF2E1P29083 439 aaPredicted RBP19.48■□□□□ 0.71
LRRK1-211ENST00000538064 ZNF34Q8IZ26 560 aa19.48■□□□□ 0.71
LRRK1-211ENST00000538064 GPTP24298 496 aa19.47■□□□□ 0.71
LRRK1-211ENST00000538064 CRY2Q49AN0 593 aa19.47■□□□□ 0.71
LRRK1-211ENST00000538064 NUTM1Q86Y26 1132 aa19.47■□□□□ 0.71
LRRK1-211ENST00000538064 RBM46Q8TBY0 533 aaKnown RBP19.47■□□□□ 0.71
LRRK1-211ENST00000538064 C7orf43Q8WVR3 580 aa19.47■□□□□ 0.71
LRRK1-211ENST00000538064 CEP350Q5VT06 3117 aa19.47■□□□□ 0.71
LRRK1-211ENST00000538064 GLTPD2A6NH11 291 aa19.46■□□□□ 0.71
LRRK1-211ENST00000538064 NTSR2O95665 410 aa19.46■□□□□ 0.71
LRRK1-211ENST00000538064 HOXB7P09629 217 aa19.46■□□□□ 0.71
LRRK1-211ENST00000538064 KRT24Q2M2I5 525 aa19.46■□□□□ 0.71
LRRK1-211ENST00000538064 ERFEQ4G0M1 354 aa19.46■□□□□ 0.71
LRRK1-211ENST00000538064 CCDC93Q567U6 631 aa19.46■□□□□ 0.71
LRRK1-211ENST00000538064 C16orf71Q8IYS4 520 aaPredicted RBP19.46■□□□□ 0.71
LRRK1-211ENST00000538064 LAS1LQ9Y4W2 734 aaKnown RBP19.46■□□□□ 0.71
LRRK1-211ENST00000538064 ANXA1P04083 346 aa19.45■□□□□ 0.7
LRRK1-211ENST00000538064 PARP10Q53GL7 1025 aa19.45■□□□□ 0.7
LRRK1-211ENST00000538064 SUSD4Q5VX71 490 aa19.45■□□□□ 0.7
LRRK1-211ENST00000538064 CFAP44Q96MT7 982 aa19.45■□□□□ 0.7
LRRK1-211ENST00000538064 SNED1Q8TER0 1413 aa19.44■□□□□ 0.7
LRRK1-211ENST00000538064 ALDH1B1P30837 517 aa19.44■□□□□ 0.7
LRRK1-211ENST00000538064 NECTIN2Q92692 538 aa19.44■□□□□ 0.7
LRRK1-211ENST00000538064 RRAGCQ9HB90 399 aa19.44■□□□□ 0.7
LRRK1-211ENST00000538064 DDX21Q9NR30 783 aaKnown RBP eCLIP19.44■□□□□ 0.7
LRRK1-211ENST00000538064 APAF1O14727 1248 aa19.43■□□□□ 0.7
LRRK1-211ENST00000538064 PPP1R42Q7Z4L9 355 aa19.43■□□□□ 0.7
LRRK1-211ENST00000538064 RNF123Q5XPI4 1314 aa19.43■□□□□ 0.7
LRRK1-211ENST00000538064 DDX60Q8IY21 1712 aaKnown RBP19.42■□□□□ 0.7
LRRK1-211ENST00000538064 ZNF853P0CG23 659 aa19.42■□□□□ 0.7
LRRK1-211ENST00000538064 CALD1Q05682 793 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms