RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 SFI1A8K8P3 1242 aa3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 POTECB2RU33 542 aa3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 SNRPBP14678 240 aaKnown RBP3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 PHKA2P46019 1235 aa3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 SMCPP49901 116 aaPredicted RBP3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 TBCELQ5QJ74 424 aa3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 Q6ZVU0 165 aa3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 PLEKHM2Q8IWE5 1019 aa3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 CRIPAKQ8N1N5 446 aa3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 CNKSR1Q969H4 720 aa3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 RRP7BPQ9NSQ0 103 aa3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 KDM5CP41229 1560 aa3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 PREX2Q70Z35 1606 aa3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 MYOM3Q5VTT5 1437 aa3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ZNF518AQ6AHZ1 1483 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 MAGI2Q86UL8 1455 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 EHBP1L1Q8N3D4 1523 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 IL2RAP01589 272 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 PLA2G4AP47712 749 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 HSPA2P54652 639 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 DPYDQ12882 1025 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ESCO1Q5FWF5 840 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 CCDC102BQ68D86 513 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 TMEM214Q6NUQ4 689 aaKnown RBP3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 CCDC125Q86Z20 511 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 KCTD17Q8N5Z5 321 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 TSEN2Q8NCE0 465 aaKnown RBP3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 GAS2L2Q8NHY3 880 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 HINFPQ9BQA5 517 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 TRAIPQ9BWF2 469 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 SENP2Q9HC62 589 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ZNF358Q9NW07 568 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 DNMT3LQ9UJW3 386 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 DHX29Q7Z478 1369 aaKnown RBP3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 KIDINS220Q9ULH0 1771 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 FGD6Q6ZV73 1430 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 PTPRMP28827 1452 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 CAMSAP2Q08AD1 1489 aa3.86□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ZFYVE16Q7Z3T8 1539 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 MYO5CQ9NQX4 1742 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 KIF3BO15066 747 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 SPINT1O43278 529 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 GNRH1P01148 92 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 VEGFBP49765 207 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 SCNN1DP51172 638 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 PDE4CQ08493 712 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 CLN3Q13286 438 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 FAM50AQ14320 339 aaKnown RBP3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 FOXD4L5Q5VV16 416 aaPredicted RBP3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ZNF787Q6DD87 383 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 GGT6Q6P531 493 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 KDF1Q8NAX2 398 aaPredicted RBP3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 RNF217Q8TC41 542 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 STK32AQ8WU08 396 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 PBXIP1Q96AQ6 731 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ZSCAN10Q96SZ4 725 aaPredicted RBP3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 GPAMQ9HCL2 828 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 NOVA2Q9UNW9 492 aaKnown RBP3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 PCDHGA11Q9Y5H2 935 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 RTEL1-TNFRSF6BF6WH68 1400 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 NCOA1Q15788 1441 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 C9orf84Q5VXU9 1444 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 MIA2Q96PC5 1412 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 PLEKHH2Q8IVE3 1493 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ARHGEF40Q8TER5 1519 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 DIP2CQ9Y2E4 1556 aa3.85□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ABCA6Q8N139 1617 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ADAMTSL3P82987 1691 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 CARNS1A5YM72 827 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 TMEM229AB2RXF0 380 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 INHAP05111 366 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 TSPY4P0CV99 314 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 TSPY10P0CW01 314 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ITGAEP38570 1179 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 GNASQ5JWF2 1037 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 RIPOR1Q6ZS17 1223 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 LYSMD3Q7Z3D4 306 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ANKMY2Q8IV38 441 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 TNS4Q8IZW8 715 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 KIFC2Q96AC6 838 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 TRIM47Q96LD4 638 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 GAS2L1Q99501 681 aaPredicted RBP3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ESYT1Q9BSJ8 1104 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ZNF232Q9UNY5 417 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 PARP3Q9Y6F1 533 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ZMYM3Q14202 1370 aa3.84□□□□□ -1.79
TNFRSF1A-210ENST00000537842 TCOF1Q13428 1488 aaKnown RBP3.84□□□□□ -1.8
TNFRSF1A-210ENST00000537842 ITSN2Q9NZM3 1697 aa3.84□□□□□ -1.8
TNFRSF1A-210ENST00000537842 CDC14CA4D256 554 aa3.83□□□□□ -1.8
TNFRSF1A-210ENST00000537842 FAM196BA6NMK8 535 aa3.83□□□□□ -1.8
TNFRSF1A-210ENST00000537842 BACH1O14867 736 aa3.83□□□□□ -1.8
TNFRSF1A-210ENST00000537842 LZTS3O60299 673 aaPredicted RBP3.83□□□□□ -1.8
TNFRSF1A-210ENST00000537842 PRMT3O60678 531 aa3.83□□□□□ -1.8
TNFRSF1A-210ENST00000537842 PPP1R15AO75807 674 aaPredicted RBP3.83□□□□□ -1.8
TNFRSF1A-210ENST00000537842 SEC13P55735 322 aa3.83□□□□□ -1.8
TNFRSF1A-210ENST00000537842 CENPCQ03188 943 aa3.83□□□□□ -1.8
TNFRSF1A-210ENST00000537842 POU4F2Q12837 409 aa3.83□□□□□ -1.8
TNFRSF1A-210ENST00000537842 PTK7Q13308 1070 aa3.83□□□□□ -1.8
TNFRSF1A-210ENST00000537842 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms