RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 TBC1D2BQ9UPU7 963 aa19.86■□□□□ 0.77
SFSWAP-206ENST00000537582 DDX58O95786 925 aaKnown RBP19.85■□□□□ 0.77
SFSWAP-206ENST00000537582 INTS3Q68E01 1043 aaKnown RBP19.85■□□□□ 0.77
SFSWAP-206ENST00000537582 RC3H1Q5TC82 1133 aaKnown RBP19.84■□□□□ 0.77
SFSWAP-206ENST00000537582 PLBD2Q8NHP8 589 aa19.84■□□□□ 0.77
SFSWAP-206ENST00000537582 CAMKK2Q96RR4 588 aa19.84■□□□□ 0.77
SFSWAP-206ENST00000537582 NUP188Q5SRE5 1749 aa19.84■□□□□ 0.77
SFSWAP-206ENST00000537582 ARFGEF2Q9Y6D5 1785 aa19.84■□□□□ 0.77
SFSWAP-206ENST00000537582 COL15A1P39059 1388 aa19.84■□□□□ 0.77
SFSWAP-206ENST00000537582 BEND3Q5T5X7 828 aa19.83■□□□□ 0.77
SFSWAP-206ENST00000537582 DZIP3Q86Y13 1208 aaKnown RBP19.83■□□□□ 0.77
SFSWAP-206ENST00000537582 PXDNLA1KZ92 1463 aa19.83■□□□□ 0.77
SFSWAP-206ENST00000537582 HLFQ16534 295 aa19.83■□□□□ 0.76
SFSWAP-206ENST00000537582 CWF19L2Q2TBE0 894 aaKnown RBP19.83■□□□□ 0.76
SFSWAP-206ENST00000537582 MYD88Q99836 296 aa19.83■□□□□ 0.76
SFSWAP-206ENST00000537582 RGPD3A6NKT7 1758 aaPredicted RBP19.82■□□□□ 0.76
SFSWAP-206ENST00000537582 RGPD4Q7Z3J3 1758 aa19.82■□□□□ 0.76
SFSWAP-206ENST00000537582 RPS6KA4O75676 772 aa19.82■□□□□ 0.76
SFSWAP-206ENST00000537582 PHF14O94880 888 aa19.82■□□□□ 0.76
SFSWAP-206ENST00000537582 IGKV5-2P06315 115 aa19.82■□□□□ 0.76
SFSWAP-206ENST00000537582 ZNF827Q17R98 1081 aa19.82■□□□□ 0.76
SFSWAP-206ENST00000537582 KIF6Q6ZMV9 814 aa19.82■□□□□ 0.76
SFSWAP-206ENST00000537582 MAP3K15Q6ZN16 1313 aa19.82■□□□□ 0.76
SFSWAP-206ENST00000537582 AK7Q96M32 723 aa19.82■□□□□ 0.76
SFSWAP-206ENST00000537582 METTL22Q9BUU2 404 aaPredicted RBP19.82■□□□□ 0.76
SFSWAP-206ENST00000537582 ATP5J2-PTCD1G3V325 749 aa19.81■□□□□ 0.76
SFSWAP-206ENST00000537582 CCT4P50991 539 aaKnown RBP19.81■□□□□ 0.76
SFSWAP-206ENST00000537582 ATP10DQ9P241 1426 aa19.8■□□□□ 0.76
SFSWAP-206ENST00000537582 ZBTB7BO15156 539 aaPredicted RBP19.8■□□□□ 0.76
SFSWAP-206ENST00000537582 SF3B2Q13435 895 aaKnown RBP19.8■□□□□ 0.76
SFSWAP-206ENST00000537582 MEIS3Q99687 375 aa19.8■□□□□ 0.76
SFSWAP-206ENST00000537582 N4BP2Q86UW6 1770 aaPredicted RBP19.8■□□□□ 0.76
SFSWAP-206ENST00000537582 SRCIN1Q9C0H9 1055 aa19.79■□□□□ 0.76
SFSWAP-206ENST00000537582 DDX19BQ9UMR2 479 aa19.79■□□□□ 0.76
SFSWAP-206ENST00000537582 RTCBQ9Y3I0 505 aaKnown RBP19.79■□□□□ 0.76
SFSWAP-206ENST00000537582 CAMTA2O94983 1202 aa19.78■□□□□ 0.76
SFSWAP-206ENST00000537582 BAG6P46379 1132 aa19.78■□□□□ 0.76
SFSWAP-206ENST00000537582 C1orf115Q9H7X2 142 aa19.78■□□□□ 0.76
SFSWAP-206ENST00000537582 SRP68Q9UHB9 627 aaKnown RBP19.78■□□□□ 0.76
SFSWAP-206ENST00000537582 NPM2Q86SE8 214 aaKnown RBP19.78■□□□□ 0.76
SFSWAP-206ENST00000537582 LINS1Q8NG48 757 aa19.78■□□□□ 0.76
SFSWAP-206ENST00000537582 ARHGEF1Q92888 912 aaKnown RBP19.78■□□□□ 0.76
SFSWAP-206ENST00000537582 AKT1S1Q96B36 256 aa19.78■□□□□ 0.76
SFSWAP-206ENST00000537582 ANO8Q9HCE9 1232 aaPredicted RBP19.78■□□□□ 0.76
SFSWAP-206ENST00000537582 UBR3Q6ZT12 1888 aa19.77■□□□□ 0.76
SFSWAP-206ENST00000537582 NEURL1BA8MQ27 555 aa19.77■□□□□ 0.76
SFSWAP-206ENST00000537582 ZBTB40Q9NUA8 1239 aa19.77■□□□□ 0.76
SFSWAP-206ENST00000537582 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.76■□□□□ 0.75
SFSWAP-206ENST00000537582 GIGYF2Q6Y7W6 1299 aaKnown RBP19.76■□□□□ 0.75
SFSWAP-206ENST00000537582 USP44Q9H0E7 712 aa19.76■□□□□ 0.75
SFSWAP-206ENST00000537582 C4AP0C0L4 1744 aa19.76■□□□□ 0.75
SFSWAP-206ENST00000537582 GPTP24298 496 aa19.75■□□□□ 0.75
SFSWAP-206ENST00000537582 NEXNQ0ZGT2 675 aa19.75■□□□□ 0.75
SFSWAP-206ENST00000537582 ILDR2Q71H61 639 aa19.75■□□□□ 0.75
SFSWAP-206ENST00000537582 JARID2Q92833 1246 aaPredicted RBP19.75■□□□□ 0.75
SFSWAP-206ENST00000537582 BCL2L12Q9HB09 334 aa19.75■□□□□ 0.75
SFSWAP-206ENST00000537582 ERVV-1B6SEH8 477 aa19.74■□□□□ 0.75
SFSWAP-206ENST00000537582 TCIRG1Q13488 830 aa19.74■□□□□ 0.75
SFSWAP-206ENST00000537582 USPL1Q5W0Q7 1092 aa19.74■□□□□ 0.75
SFSWAP-206ENST00000537582 PCDHB15Q9Y5E8 787 aa19.74■□□□□ 0.75
SFSWAP-206ENST00000537582 BCORQ6W2J9 1755 aa19.74■□□□□ 0.75
SFSWAP-206ENST00000537582 SCN7AQ01118 1682 aa19.74■□□□□ 0.75
SFSWAP-206ENST00000537582 A0A087WZG4 1122 aa19.74■□□□□ 0.75
SFSWAP-206ENST00000537582 ALDH1L1O75891 902 aa19.74■□□□□ 0.75
SFSWAP-206ENST00000537582 NBPF7P0C2Y1 421 aaPredicted RBP19.74■□□□□ 0.75
SFSWAP-206ENST00000537582 GCKRQ14397 625 aa19.74■□□□□ 0.75
SFSWAP-206ENST00000537582 TRAPPC3LQ5T215 181 aa19.74■□□□□ 0.75
SFSWAP-206ENST00000537582 UPF1Q92900 1129 aaKnown RBP eCLIP19.74■□□□□ 0.75
SFSWAP-206ENST00000537582 ISCA1Q9BUE6 129 aa19.74■□□□□ 0.75
SFSWAP-206ENST00000537582 TUBGCP6Q96RT7 1819 aa19.73■□□□□ 0.75
SFSWAP-206ENST00000537582 ERICH6BQ5W0A0 696 aa19.73■□□□□ 0.75
SFSWAP-206ENST00000537582 B4GALNT3Q6L9W6 998 aa19.73■□□□□ 0.75
SFSWAP-206ENST00000537582 TFCP2L1Q9NZI6 479 aa19.73■□□□□ 0.75
SFSWAP-206ENST00000537582 NARFQ9UHQ1 456 aa19.73■□□□□ 0.75
SFSWAP-206ENST00000537582 UBN2Q6ZU65 1347 aa19.72■□□□□ 0.75
SFSWAP-206ENST00000537582 NUP98P52948 1817 aa19.72■□□□□ 0.75
SFSWAP-206ENST00000537582 AFDNP55196 1824 aaKnown RBP19.72■□□□□ 0.75
SFSWAP-206ENST00000537582 USP42Q9H9J4 1324 aaKnown RBP19.72■□□□□ 0.75
SFSWAP-206ENST00000537582 SSFA2P28290 1259 aa19.71■□□□□ 0.75
SFSWAP-206ENST00000537582 RFC4P35249 363 aa19.71■□□□□ 0.75
SFSWAP-206ENST00000537582 CCDC125Q86Z20 511 aa19.71■□□□□ 0.75
SFSWAP-206ENST00000537582 PPP4R2Q9NY27 417 aa19.71■□□□□ 0.75
SFSWAP-206ENST00000537582 GRM8O00222 908 aa19.7■□□□□ 0.74
SFSWAP-206ENST00000537582 RTL5Q5HYW3 569 aaPredicted RBP19.7■□□□□ 0.74
SFSWAP-206ENST00000537582 ZNF34Q8IZ26 560 aa19.7■□□□□ 0.74
SFSWAP-206ENST00000537582 ANKRD36CQ5JPF3 1778 aa19.7■□□□□ 0.74
SFSWAP-206ENST00000537582 ZPR1O75312 459 aa19.7■□□□□ 0.74
SFSWAP-206ENST00000537582 ADRA2BP18089 450 aa19.7■□□□□ 0.74
SFSWAP-206ENST00000537582 NLRP10Q86W26 655 aa19.7■□□□□ 0.74
SFSWAP-206ENST00000537582 COL23A1Q86Y22 540 aaPredicted RBP19.7■□□□□ 0.74
SFSWAP-206ENST00000537582 CWC25Q9NXE8 425 aaPredicted RBP19.7■□□□□ 0.74
SFSWAP-206ENST00000537582 C9orf78Q9NZ63 289 aaPredicted RBP19.7■□□□□ 0.74
SFSWAP-206ENST00000537582 PNPLA7Q6ZV29 1317 aa19.69■□□□□ 0.74
SFSWAP-206ENST00000537582 UBTFL1P0CB47 393 aaPredicted RBP19.69■□□□□ 0.74
SFSWAP-206ENST00000537582 TBC1D9BQ66K14 1250 aa19.69■□□□□ 0.74
SFSWAP-206ENST00000537582 LRRFIP2Q9Y608 721 aaKnown RBP19.69■□□□□ 0.74
SFSWAP-206ENST00000537582 FAM177BA6PVY3 158 aa19.68■□□□□ 0.74
SFSWAP-206ENST00000537582 GNAI3P08754 354 aa19.68■□□□□ 0.74
SFSWAP-206ENST00000537582 SLC15A2Q16348 729 aa19.68■□□□□ 0.74
SFSWAP-206ENST00000537582 HSP90AB3PQ58FF7 597 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms