RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 CCDC34Q96HJ3 373 aa9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 MRFAP1L1Q96HT8 127 aa9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 NUP62CLQ9H1M0 184 aa9.99□□□□□ -0.81
SRGAP1-202ENST00000537556 NRDCO43847 1150 aa9.98□□□□□ -0.81
SRGAP1-202ENST00000537556 SASH3O75995 380 aa9.98□□□□□ -0.81
SRGAP1-202ENST00000537556 ERLIN2O94905 339 aa9.98□□□□□ -0.81
SRGAP1-202ENST00000537556 SEC31AO94979 1220 aaKnown RBP9.98□□□□□ -0.81
SRGAP1-202ENST00000537556 NOS1P29475 1434 aa9.98□□□□□ -0.81
SRGAP1-202ENST00000537556 FBLN2P98095 1184 aa9.98□□□□□ -0.81
SRGAP1-202ENST00000537556 TTLL5Q6EMB2 1281 aa9.98□□□□□ -0.81
SRGAP1-202ENST00000537556 GPR161Q8N6U8 529 aaKnown RBP9.98□□□□□ -0.81
SRGAP1-202ENST00000537556 CALR3Q96L12 384 aaKnown RBP9.98□□□□□ -0.81
SRGAP1-202ENST00000537556 A1CFQ9NQ94 594 aaKnown RBP9.98□□□□□ -0.81
SRGAP1-202ENST00000537556 ANO6Q4KMQ2 910 aa9.98□□□□□ -0.81
SRGAP1-202ENST00000537556 JAKMIP3Q5VZ66 844 aa9.98□□□□□ -0.81
SRGAP1-202ENST00000537556 RTL1A6NKG5 1358 aa9.97□□□□□ -0.81
SRGAP1-202ENST00000537556 CCDC69A6NI79 296 aa9.97□□□□□ -0.81
SRGAP1-202ENST00000537556 GOLGA6L19H0YKK7 550 aa9.97□□□□□ -0.81
SRGAP1-202ENST00000537556 MPHOSPH10O00566 681 aaKnown RBP9.97□□□□□ -0.81
SRGAP1-202ENST00000537556 ZBTB7BO15156 539 aaPredicted RBP9.97□□□□□ -0.81
SRGAP1-202ENST00000537556 GSDMDP57764 484 aa9.97□□□□□ -0.81
SRGAP1-202ENST00000537556 ITFG2Q969R8 447 aa9.97□□□□□ -0.81
SRGAP1-202ENST00000537556 ZNF428Q96B54 188 aa9.97□□□□□ -0.81
SRGAP1-202ENST00000537556 MIEF2Q96C03 454 aa9.97□□□□□ -0.81
SRGAP1-202ENST00000537556 NBPF3Q9H094 633 aa9.97□□□□□ -0.81
SRGAP1-202ENST00000537556 PSDA5PKW4 1024 aaPredicted RBP9.97□□□□□ -0.81
SRGAP1-202ENST00000537556 DHX8Q14562 1220 aaKnown RBP9.97□□□□□ -0.81
SRGAP1-202ENST00000537556 ALDH1L2Q3SY69 923 aa9.97□□□□□ -0.81
SRGAP1-202ENST00000537556 SARM1Q6SZW1 724 aa9.97□□□□□ -0.81
SRGAP1-202ENST00000537556 DDX11Q96FC9 970 aa9.97□□□□□ -0.81
SRGAP1-202ENST00000537556 GNL3LQ9NVN8 582 aaKnown RBP9.97□□□□□ -0.81
SRGAP1-202ENST00000537556 CCP110O43303 1012 aa9.96□□□□□ -0.81
SRGAP1-202ENST00000537556 EIF3JO75822 258 aaKnown RBP9.96□□□□□ -0.81
SRGAP1-202ENST00000537556 ZNF165P49910 485 aa9.96□□□□□ -0.81
SRGAP1-202ENST00000537556 OS9Q13438 667 aaPredicted RBP9.96□□□□□ -0.81
SRGAP1-202ENST00000537556 NEDD9Q14511 834 aa9.96□□□□□ -0.81
SRGAP1-202ENST00000537556 VPS18Q9P253 973 aa9.96□□□□□ -0.81
SRGAP1-202ENST00000537556 TCHHQ07283 1943 aa9.96□□□□□ -0.81
SRGAP1-202ENST00000537556 PPFIA4O75335 1185 aa9.96□□□□□ -0.82
SRGAP1-202ENST00000537556 SDSP20132 328 aa9.96□□□□□ -0.82
SRGAP1-202ENST00000537556 CCZ1BP86790 482 aa9.96□□□□□ -0.82
SRGAP1-202ENST00000537556 CCZ1P86791 482 aaPredicted RBP9.96□□□□□ -0.82
SRGAP1-202ENST00000537556 TSR2Q969E8 191 aaKnown RBP9.96□□□□□ -0.82
SRGAP1-202ENST00000537556 TNMDQ9H2S6 317 aa9.96□□□□□ -0.82
SRGAP1-202ENST00000537556 RGS12O14924 1447 aa9.96□□□□□ -0.82
SRGAP1-202ENST00000537556 MED14O60244 1454 aa9.96□□□□□ -0.82
SRGAP1-202ENST00000537556 SRGAP3O43295 1099 aa9.96□□□□□ -0.82
SRGAP1-202ENST00000537556 STX6O43752 255 aa9.96□□□□□ -0.82
SRGAP1-202ENST00000537556 TADA3O75528 432 aa9.96□□□□□ -0.82
SRGAP1-202ENST00000537556 F13A1P00488 732 aa9.96□□□□□ -0.82
SRGAP1-202ENST00000537556 HNRNPH1P31943 449 aaKnown RBP9.96□□□□□ -0.82
SRGAP1-202ENST00000537556 FAM210AQ96ND0 272 aa9.96□□□□□ -0.82
SRGAP1-202ENST00000537556 FUT8Q9BYC5 575 aa9.96□□□□□ -0.82
SRGAP1-202ENST00000537556 PHLPP2Q6ZVD8 1323 aa9.96□□□□□ -0.82
SRGAP1-202ENST00000537556 LRRFIP1Q32MZ4 808 aaKnown RBP9.95□□□□□ -0.82
SRGAP1-202ENST00000537556 VEZTQ9HBM0 779 aa9.95□□□□□ -0.82
SRGAP1-202ENST00000537556 NEBLO76041 1014 aa9.95□□□□□ -0.82
SRGAP1-202ENST00000537556 SCP2P22307 547 aa9.95□□□□□ -0.82
SRGAP1-202ENST00000537556 KCNJ6P48051 423 aa9.95□□□□□ -0.82
SRGAP1-202ENST00000537556 HOMER1Q86YM7 354 aa9.95□□□□□ -0.82
SRGAP1-202ENST00000537556 MSL3Q8N5Y2 521 aaKnown RBP9.95□□□□□ -0.82
SRGAP1-202ENST00000537556 OTUD6BQ8N6M0 293 aa9.95□□□□□ -0.82
SRGAP1-202ENST00000537556 LRRN4CLQ8ND94 238 aa9.95□□□□□ -0.82
SRGAP1-202ENST00000537556 CFAP53Q96M91 514 aa9.95□□□□□ -0.82
SRGAP1-202ENST00000537556 A2MP01023 1474 aa9.95□□□□□ -0.82
SRGAP1-202ENST00000537556 CDK13Q14004 1512 aaKnown RBP9.94□□□□□ -0.82
SRGAP1-202ENST00000537556 TTC41PQ6P2S7 1318 aa9.94□□□□□ -0.82
SRGAP1-202ENST00000537556 EVCP57679 992 aa9.94□□□□□ -0.82
SRGAP1-202ENST00000537556 ETF1P62495 437 aaKnown RBP9.94□□□□□ -0.82
SRGAP1-202ENST00000537556 GORABQ5T7V8 394 aa9.94□□□□□ -0.82
SRGAP1-202ENST00000537556 FOXR1Q6PIV2 292 aa9.94□□□□□ -0.82
SRGAP1-202ENST00000537556 NOL8Q76FK4 1167 aaKnown RBP9.94□□□□□ -0.82
SRGAP1-202ENST00000537556 MYOM2P54296 1465 aa9.94□□□□□ -0.82
SRGAP1-202ENST00000537556 ELF1P32519 619 aa9.94□□□□□ -0.82
SRGAP1-202ENST00000537556 RDXP35241 583 aaKnown RBP9.94□□□□□ -0.82
SRGAP1-202ENST00000537556 PPP1R13BQ96KQ4 1090 aa9.94□□□□□ -0.82
SRGAP1-202ENST00000537556 UTP14AQ9BVJ6 771 aaKnown RBP9.94□□□□□ -0.82
SRGAP1-202ENST00000537556 DDX19AQ9NUU7 478 aaKnown RBP9.94□□□□□ -0.82
SRGAP1-202ENST00000537556 CFDP1Q9UEE9 299 aaPredicted RBP9.94□□□□□ -0.82
SRGAP1-202ENST00000537556 DNAI1Q9UI46 699 aa9.94□□□□□ -0.82
SRGAP1-202ENST00000537556 TRAK1Q9UPV9 953 aa9.94□□□□□ -0.82
SRGAP1-202ENST00000537556 CCDC151A5D8V7 595 aa9.93□□□□□ -0.82
SRGAP1-202ENST00000537556 CWC27Q6UX04 472 aaKnown RBP9.93□□□□□ -0.82
SRGAP1-202ENST00000537556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.93□□□□□ -0.82
SRGAP1-202ENST00000537556 TEX11Q8IYF3 940 aa9.93□□□□□ -0.82
SRGAP1-202ENST00000537556 FAXDC2Q96IV6 333 aa9.93□□□□□ -0.82
SRGAP1-202ENST00000537556 ACBD3Q9H3P7 528 aa9.93□□□□□ -0.82
SRGAP1-202ENST00000537556 ZBTB12Q9Y330 459 aaPredicted RBP9.93□□□□□ -0.82
SRGAP1-202ENST00000537556 ADGRL1O94910 1474 aa9.93□□□□□ -0.82
SRGAP1-202ENST00000537556 IL16Q14005 1332 aa9.93□□□□□ -0.82
SRGAP1-202ENST00000537556 APOBRQ0VD83 1088 aa9.93□□□□□ -0.82
SRGAP1-202ENST00000537556 HSP90B2PQ58FF3 399 aa9.93□□□□□ -0.82
SRGAP1-202ENST00000537556 CCDC30Q5VVM6 783 aa9.93□□□□□ -0.82
SRGAP1-202ENST00000537556 LRRC31Q6UY01 552 aa9.93□□□□□ -0.82
SRGAP1-202ENST00000537556 NUTM1Q86Y26 1132 aa9.93□□□□□ -0.82
SRGAP1-202ENST00000537556 ANKRD33BA6NCL7 494 aa9.93□□□□□ -0.82
SRGAP1-202ENST00000537556 TMCO5BA8MYB1 307 aa9.93□□□□□ -0.82
SRGAP1-202ENST00000537556 H3BQF6 201 aa9.93□□□□□ -0.82
SRGAP1-202ENST00000537556 MAP2K7O14733 419 aa9.93□□□□□ -0.82
SRGAP1-202ENST00000537556 CTAGE5O15320 804 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms