RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 CCDC24Q8N4L8 307 aa23.36■■□□□ 1.33
TNFRSF1A-209ENST00000536717 NGEFQ8N5V2 710 aa23.36■■□□□ 1.33
TNFRSF1A-209ENST00000536717 ERBB4Q15303 1308 aa23.36■■□□□ 1.33
TNFRSF1A-209ENST00000536717 MYL6BP14649 208 aa23.35■■□□□ 1.33
TNFRSF1A-209ENST00000536717 TTLL7Q6ZT98 887 aa23.34■■□□□ 1.33
TNFRSF1A-209ENST00000536717 CNBD1Q8NA66 436 aa23.34■■□□□ 1.33
TNFRSF1A-209ENST00000536717 LAS1LQ9Y4W2 734 aaKnown RBP23.34■■□□□ 1.33
TNFRSF1A-209ENST00000536717 EIF2S2P20042 333 aaKnown RBP23.33■■□□□ 1.33
TNFRSF1A-209ENST00000536717 KRT24Q2M2I5 525 aa23.33■■□□□ 1.33
TNFRSF1A-209ENST00000536717 ARHGAP27Q6ZUM4 889 aa23.33■■□□□ 1.33
TNFRSF1A-209ENST00000536717 LRP10Q7Z4F1 713 aa23.33■■□□□ 1.33
TNFRSF1A-209ENST00000536717 C2CD5Q86YS7 1000 aa23.33■■□□□ 1.33
TNFRSF1A-209ENST00000536717 BRIP1Q9BX63 1249 aa23.33■■□□□ 1.33
TNFRSF1A-209ENST00000536717 ATP10DQ9P241 1426 aa23.33■■□□□ 1.33
TNFRSF1A-209ENST00000536717 CCDC88AQ3V6T2 1871 aa23.33■■□□□ 1.32
TNFRSF1A-209ENST00000536717 PDIA6Q15084 440 aa23.33■■□□□ 1.32
TNFRSF1A-209ENST00000536717 CFAP44Q96MT7 982 aa23.33■■□□□ 1.32
TNFRSF1A-209ENST00000536717 NIP7Q9Y221 180 aaKnown RBP eCLIP23.33■■□□□ 1.32
TNFRSF1A-209ENST00000536717 MAP3K15Q6ZN16 1313 aa23.32■■□□□ 1.32
TNFRSF1A-209ENST00000536717 H0YIN7 160 aa23.32■■□□□ 1.32
TNFRSF1A-209ENST00000536717 ERVV-1B6SEH8 477 aa23.31■■□□□ 1.32
TNFRSF1A-209ENST00000536717 ARFGEF2Q9Y6D5 1785 aa23.31■■□□□ 1.32
TNFRSF1A-209ENST00000536717 PDE6BP35913 854 aa23.3■■□□□ 1.32
TNFRSF1A-209ENST00000536717 PROSER3Q2NL68 480 aa23.3■■□□□ 1.32
TNFRSF1A-209ENST00000536717 NBPF5PQ86XG9 351 aaPredicted RBP23.3■■□□□ 1.32
TNFRSF1A-209ENST00000536717 MRS2Q9HD23 443 aa23.3■■□□□ 1.32
TNFRSF1A-209ENST00000536717 SLX4Q8IY92 1834 aa23.29■■□□□ 1.32
TNFRSF1A-209ENST00000536717 NPHP1O15259 732 aa23.29■■□□□ 1.32
TNFRSF1A-209ENST00000536717 ANXA1P04083 346 aa23.29■■□□□ 1.32
TNFRSF1A-209ENST00000536717 ZNF853P0CG23 659 aa23.29■■□□□ 1.32
TNFRSF1A-209ENST00000536717 ST5P78524 1137 aa23.29■■□□□ 1.32
TNFRSF1A-209ENST00000536717 KIF6Q6ZMV9 814 aa23.29■■□□□ 1.32
TNFRSF1A-209ENST00000536717 TTLL6Q8N841 843 aa23.29■■□□□ 1.32
TNFRSF1A-209ENST00000536717 PDZRN3Q9UPQ7 1066 aa23.29■■□□□ 1.32
TNFRSF1A-209ENST00000536717 NECTIN2Q92692 538 aa23.28■■□□□ 1.32
TNFRSF1A-209ENST00000536717 MBIPQ9NS73 344 aa23.28■■□□□ 1.32
TNFRSF1A-209ENST00000536717 ANKRD36CQ5JPF3 1778 aa23.28■■□□□ 1.32
TNFRSF1A-209ENST00000536717 MIER1Q8N108 512 aa23.28■■□□□ 1.32
TNFRSF1A-209ENST00000536717 ZBTB3Q9H5J0 574 aa23.28■■□□□ 1.32
TNFRSF1A-209ENST00000536717 FER1L6Q2WGJ9 1857 aa23.26■■□□□ 1.31
TNFRSF1A-209ENST00000536717 FAM177BA6PVY3 158 aa23.26■■□□□ 1.31
TNFRSF1A-209ENST00000536717 TPTE2Q6XPS3 522 aa23.26■■□□□ 1.31
TNFRSF1A-209ENST00000536717 ZNF622Q969S3 477 aaKnown RBP eCLIP23.26■■□□□ 1.31
TNFRSF1A-209ENST00000536717 IFT57Q9NWB7 429 aa23.26■■□□□ 1.31
TNFRSF1A-209ENST00000536717 TNRC6CQ9HCJ0 1690 aaKnown RBP23.25■■□□□ 1.31
TNFRSF1A-209ENST00000536717 CCER2I3L3R5 266 aa23.25■■□□□ 1.31
TNFRSF1A-209ENST00000536717 HOXB7P09629 217 aa23.25■■□□□ 1.31
TNFRSF1A-209ENST00000536717 SRGNP10124 158 aa23.24■■□□□ 1.31
TNFRSF1A-209ENST00000536717 GIGYF2Q6Y7W6 1299 aaKnown RBP23.24■■□□□ 1.31
TNFRSF1A-209ENST00000536717 UBN2Q6ZU65 1347 aa23.24■■□□□ 1.31
TNFRSF1A-209ENST00000536717 SENP3-EIF4A1A0A087X0R7 540 aa23.23■■□□□ 1.31
TNFRSF1A-209ENST00000536717 GNAI1P63096 354 aa23.23■■□□□ 1.31
TNFRSF1A-209ENST00000536717 CALD1Q05682 793 aaKnown RBP23.23■■□□□ 1.31
TNFRSF1A-209ENST00000536717 DDX21Q9NR30 783 aaKnown RBP eCLIP23.23■■□□□ 1.31
TNFRSF1A-209ENST00000536717 KLRG2A4D1S0 409 aaPredicted RBP23.23■■□□□ 1.31
TNFRSF1A-209ENST00000536717 GPTP24298 496 aa23.23■■□□□ 1.31
TNFRSF1A-209ENST00000536717 HDGFL1Q5TGJ6 251 aa23.23■■□□□ 1.31
TNFRSF1A-209ENST00000536717 DUSP27Q5VZP5 1158 aa23.23■■□□□ 1.31
TNFRSF1A-209ENST00000536717 ZNF34Q8IZ26 560 aa23.23■■□□□ 1.31
TNFRSF1A-209ENST00000536717 C9orf131Q5VYM1 1079 aa23.22■■□□□ 1.31
TNFRSF1A-209ENST00000536717 COPS6Q7L5N1 327 aa23.22■■□□□ 1.31
TNFRSF1A-209ENST00000536717 ZNF526Q8TF50 670 aaPredicted RBP23.22■■□□□ 1.31
TNFRSF1A-209ENST00000536717 CHPF2Q9P2E5 772 aa23.22■■□□□ 1.31
TNFRSF1A-209ENST00000536717 DICER1Q9UPY3 1922 aaKnown RBP23.21■■□□□ 1.31
TNFRSF1A-209ENST00000536717 ABCC12Q96J65 1359 aa23.21■■□□□ 1.31
TNFRSF1A-209ENST00000536717 IBTKQ9P2D0 1353 aaPredicted RBP23.21■■□□□ 1.31
TNFRSF1A-209ENST00000536717 STYK1Q6J9G0 422 aa23.21■■□□□ 1.31
TNFRSF1A-209ENST00000536717 XAGE3Q8WTP9 111 aa23.21■■□□□ 1.31
TNFRSF1A-209ENST00000536717 MASTLQ96GX5 879 aa23.21■■□□□ 1.31
TNFRSF1A-209ENST00000536717 GPBP1L1Q9HC44 474 aaPredicted RBP23.21■■□□□ 1.31
TNFRSF1A-209ENST00000536717 RASSF7Q02833 373 aa23.2■■□□□ 1.3
TNFRSF1A-209ENST00000536717 CCDC27Q2M243 656 aa23.2■■□□□ 1.3
TNFRSF1A-209ENST00000536717 NUTM1Q86Y26 1132 aa23.2■■□□□ 1.3
TNFRSF1A-209ENST00000536717 NYXQ9GZU5 481 aa23.2■■□□□ 1.3
TNFRSF1A-209ENST00000536717 AIMP1Q12904 312 aaKnown RBP23.19■■□□□ 1.3
TNFRSF1A-209ENST00000536717 SUSD4Q5VX71 490 aa23.19■■□□□ 1.3
TNFRSF1A-209ENST00000536717 CNKSR1Q969H4 720 aa23.19■■□□□ 1.3
TNFRSF1A-209ENST00000536717 GTF2E1P29083 439 aaPredicted RBP23.18■■□□□ 1.3
TNFRSF1A-209ENST00000536717 PRELPP51888 382 aa23.18■■□□□ 1.3
TNFRSF1A-209ENST00000536717 WWC1Q8IX03 1113 aa23.18■■□□□ 1.3
TNFRSF1A-209ENST00000536717 RNF181Q9P0P0 153 aa23.18■■□□□ 1.3
TNFRSF1A-209ENST00000536717 NFKBIEO00221 500 aa23.18■■□□□ 1.3
TNFRSF1A-209ENST00000536717 C21orf2O43822 256 aa23.18■■□□□ 1.3
TNFRSF1A-209ENST00000536717 ERFEQ4G0M1 354 aa23.18■■□□□ 1.3
TNFRSF1A-209ENST00000536717 PRPF40BQ6NWY9 871 aaKnown RBP23.18■■□□□ 1.3
TNFRSF1A-209ENST00000536717 DBF4Q9UBU7 674 aaPredicted RBP23.18■■□□□ 1.3
TNFRSF1A-209ENST00000536717 TIAM2Q8IVF5 1701 aa23.17■■□□□ 1.3
TNFRSF1A-209ENST00000536717 NTSR2O95665 410 aa23.17■■□□□ 1.3
TNFRSF1A-209ENST00000536717 NPR1P16066 1061 aa23.17■■□□□ 1.3
TNFRSF1A-209ENST00000536717 RIC1Q4ADV7 1423 aa23.17■■□□□ 1.3
TNFRSF1A-209ENST00000536717 ZNF219Q9P2Y4 722 aaPredicted RBP23.17■■□□□ 1.3
TNFRSF1A-209ENST00000536717 ELL2O00472 640 aaPredicted RBP23.16■■□□□ 1.3
TNFRSF1A-209ENST00000536717 C1QTNF8P60827 252 aa23.16■■□□□ 1.3
TNFRSF1A-209ENST00000536717 NCBP3Q53F19 620 aaKnown RBP23.16■■□□□ 1.3
TNFRSF1A-209ENST00000536717 C8orf58Q8NAV2 365 aa23.16■■□□□ 1.3
TNFRSF1A-209ENST00000536717 LAMB2P55268 1798 aa23.16■■□□□ 1.3
TNFRSF1A-209ENST00000536717 PARP10Q53GL7 1025 aa23.15■■□□□ 1.3
TNFRSF1A-209ENST00000536717 CRY2Q49AN0 593 aa23.14■■□□□ 1.3
TNFRSF1A-209ENST00000536717 LMNB1P20700 586 aa23.13■■□□□ 1.29
TNFRSF1A-209ENST00000536717 TCIRG1Q13488 830 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms