RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 NRXN2Q9P2S2 1712 aa23.47■■□□□ 1.35
CCDC61-201ENST00000536603 LMNB1P20700 586 aa23.47■■□□□ 1.35
CCDC61-201ENST00000536603 SMC1BQ8NDV3 1235 aa23.47■■□□□ 1.35
CCDC61-201ENST00000536603 KLRG1Q96E93 195 aa23.47■■□□□ 1.35
CCDC61-201ENST00000536603 BCL2L12Q9HB09 334 aa23.47■■□□□ 1.35
CCDC61-201ENST00000536603 ZNF330Q9Y3S2 320 aaPredicted RBP23.47■■□□□ 1.35
CCDC61-201ENST00000536603 KDM3BQ7LBC6 1761 aa23.47■■□□□ 1.35
CCDC61-201ENST00000536603 DLEC1Q9Y238 1755 aa23.47■■□□□ 1.35
CCDC61-201ENST00000536603 CCDC88AQ3V6T2 1871 aa23.45■■□□□ 1.35
CCDC61-201ENST00000536603 ZC3H4Q9UPT8 1303 aaKnown RBP23.45■■□□□ 1.34
CCDC61-201ENST00000536603 A0A087WZG4 1122 aa23.45■■□□□ 1.34
CCDC61-201ENST00000536603 CHL1O00533 1208 aa23.45■■□□□ 1.34
CCDC61-201ENST00000536603 EIF5P55010 431 aaKnown RBP23.44■■□□□ 1.34
CCDC61-201ENST00000536603 NPM2Q86SE8 214 aaKnown RBP23.44■■□□□ 1.34
CCDC61-201ENST00000536603 VEGFAP15692 232 aaPredicted RBP23.43■■□□□ 1.34
CCDC61-201ENST00000536603 PIP4K2AP48426 406 aaPredicted RBP23.43■■□□□ 1.34
CCDC61-201ENST00000536603 TIAM2Q8IVF5 1701 aa23.42■■□□□ 1.34
CCDC61-201ENST00000536603 GLTPD2A6NH11 291 aa23.42■■□□□ 1.34
CCDC61-201ENST00000536603 IL6STP40189 918 aaPredicted RBP23.42■■□□□ 1.34
CCDC61-201ENST00000536603 ZNF622Q969S3 477 aaKnown RBP eCLIP23.42■■□□□ 1.34
CCDC61-201ENST00000536603 CFAP44Q96MT7 982 aa23.42■■□□□ 1.34
CCDC61-201ENST00000536603 CARMIL3Q8ND23 1372 aa23.41■■□□□ 1.34
CCDC61-201ENST00000536603 NPHP1O15259 732 aa23.41■■□□□ 1.34
CCDC61-201ENST00000536603 CALD1Q05682 793 aaKnown RBP23.41■■□□□ 1.34
CCDC61-201ENST00000536603 ZNF219Q9P2Y4 722 aaPredicted RBP23.41■■□□□ 1.34
CCDC61-201ENST00000536603 TBC1D9BQ66K14 1250 aa23.4■■□□□ 1.34
CCDC61-201ENST00000536603 SALL2Q9Y467 1007 aaPredicted RBP23.4■■□□□ 1.34
CCDC61-201ENST00000536603 PDE6BP35913 854 aa23.39■■□□□ 1.33
CCDC61-201ENST00000536603 CCDC27Q2M243 656 aa23.39■■□□□ 1.33
CCDC61-201ENST00000536603 JMYQ8N9B5 988 aa23.39■■□□□ 1.33
CCDC61-201ENST00000536603 TBC1D2BQ9UPU7 963 aa23.39■■□□□ 1.33
CCDC61-201ENST00000536603 NBPF26B4DH59 902 aa23.38■■□□□ 1.33
CCDC61-201ENST00000536603 CCER2I3L3R5 266 aa23.38■■□□□ 1.33
CCDC61-201ENST00000536603 ZNF853P0CG23 659 aa23.38■■□□□ 1.33
CCDC61-201ENST00000536603 PRELPP51888 382 aa23.38■■□□□ 1.33
CCDC61-201ENST00000536603 DPY19L2Q6NUT2 758 aa23.38■■□□□ 1.33
CCDC61-201ENST00000536603 NBPF10Q6P3W6 841 aaKnown RBP23.38■■□□□ 1.33
CCDC61-201ENST00000536603 WWC1Q8IX03 1113 aa23.38■■□□□ 1.33
CCDC61-201ENST00000536603 CCDC24Q8N4L8 307 aa23.38■■□□□ 1.33
CCDC61-201ENST00000536603 NBPF15Q8N660 670 aa23.38■■□□□ 1.33
CCDC61-201ENST00000536603 IFT57Q9NWB7 429 aa23.38■■□□□ 1.33
CCDC61-201ENST00000536603 NFKBIEO00221 500 aa23.37■■□□□ 1.33
CCDC61-201ENST00000536603 GNAI1P63096 354 aa23.37■■□□□ 1.33
CCDC61-201ENST00000536603 KRT24Q2M2I5 525 aa23.37■■□□□ 1.33
CCDC61-201ENST00000536603 MBIPQ9NS73 344 aa23.37■■□□□ 1.33
CCDC61-201ENST00000536603 PDZRN3Q9UPQ7 1066 aa23.37■■□□□ 1.33
CCDC61-201ENST00000536603 C21orf2O43822 256 aa23.36■■□□□ 1.33
CCDC61-201ENST00000536603 EIF2S2P20042 333 aaKnown RBP23.36■■□□□ 1.33
CCDC61-201ENST00000536603 NCBP3Q53F19 620 aaKnown RBP23.36■■□□□ 1.33
CCDC61-201ENST00000536603 BRIP1Q9BX63 1249 aa23.36■■□□□ 1.33
CCDC61-201ENST00000536603 ANKRD31Q8N7Z5 1873 aa23.36■■□□□ 1.33
CCDC61-201ENST00000536603 SCN7AQ01118 1682 aa23.35■■□□□ 1.33
CCDC61-201ENST00000536603 COL13A1Q5TAT6 717 aaPredicted RBP23.34■■□□□ 1.33
CCDC61-201ENST00000536603 PRR5LQ6MZQ0 368 aa23.34■■□□□ 1.33
CCDC61-201ENST00000536603 DZIP3Q86Y13 1208 aaKnown RBP23.34■■□□□ 1.33
CCDC61-201ENST00000536603 SETDB2Q96T68 719 aa23.34■■□□□ 1.33
CCDC61-201ENST00000536603 LAMB4A4D0S4 1761 aa23.34■■□□□ 1.33
CCDC61-201ENST00000536603 ERFEQ4G0M1 354 aa23.33■■□□□ 1.33
CCDC61-201ENST00000536603 NGEFQ8N5V2 710 aa23.33■■□□□ 1.33
CCDC61-201ENST00000536603 CNBD1Q8NA66 436 aa23.33■■□□□ 1.33
CCDC61-201ENST00000536603 CACNA1SQ13698 1873 aa23.32■■□□□ 1.32
CCDC61-201ENST00000536603 MYL6BP14649 208 aa23.32■■□□□ 1.32
CCDC61-201ENST00000536603 ST5P78524 1137 aa23.32■■□□□ 1.32
CCDC61-201ENST00000536603 NECTIN2Q92692 538 aa23.32■■□□□ 1.32
CCDC61-201ENST00000536603 COL11A2P13942 1736 aaPredicted RBP23.31■■□□□ 1.32
CCDC61-201ENST00000536603 CAMTA2O94983 1202 aa23.31■■□□□ 1.32
CCDC61-201ENST00000536603 DICER1Q9UPY3 1922 aaKnown RBP23.3■■□□□ 1.32
CCDC61-201ENST00000536603 DUSP27Q5VZP5 1158 aa23.3■■□□□ 1.32
CCDC61-201ENST00000536603 FER1L6Q2WGJ9 1857 aa23.3■■□□□ 1.32
CCDC61-201ENST00000536603 CAPN15O75808 1086 aa23.29■■□□□ 1.32
CCDC61-201ENST00000536603 CNKSR1Q969H4 720 aa23.29■■□□□ 1.32
CCDC61-201ENST00000536603 TAOK3Q9H2K8 898 aa23.29■■□□□ 1.32
CCDC61-201ENST00000536603 ERBB4Q15303 1308 aa23.29■■□□□ 1.32
CCDC61-201ENST00000536603 PDIA6Q15084 440 aa23.28■■□□□ 1.32
CCDC61-201ENST00000536603 WDR63Q8IWG1 891 aa23.28■■□□□ 1.32
CCDC61-201ENST00000536603 TNS4Q8IZW8 715 aa23.28■■□□□ 1.32
CCDC61-201ENST00000536603 TSR2Q969E8 191 aaKnown RBP23.28■■□□□ 1.32
CCDC61-201ENST00000536603 ELL2O00472 640 aaPredicted RBP23.27■■□□□ 1.32
CCDC61-201ENST00000536603 HOXB7P09629 217 aa23.27■■□□□ 1.32
CCDC61-201ENST00000536603 IL16Q14005 1332 aa23.27■■□□□ 1.32
CCDC61-201ENST00000536603 POTECB2RU33 542 aa23.26■■□□□ 1.31
CCDC61-201ENST00000536603 ANXA1P04083 346 aa23.26■■□□□ 1.31
CCDC61-201ENST00000536603 PROSER3Q2NL68 480 aa23.26■■□□□ 1.31
CCDC61-201ENST00000536603 HDGFL1Q5TGJ6 251 aa23.26■■□□□ 1.31
CCDC61-201ENST00000536603 STYK1Q6J9G0 422 aa23.26■■□□□ 1.31
CCDC61-201ENST00000536603 C8orf58Q8NAV2 365 aa23.26■■□□□ 1.31
CCDC61-201ENST00000536603 BCORQ6W2J9 1755 aa23.25■■□□□ 1.31
CCDC61-201ENST00000536603 SLX4Q8IY92 1834 aa23.25■■□□□ 1.31
CCDC61-201ENST00000536603 SOGA3Q5TF21 947 aa23.25■■□□□ 1.31
CCDC61-201ENST00000536603 PRPF40BQ6NWY9 871 aaKnown RBP23.25■■□□□ 1.31
CCDC61-201ENST00000536603 TTLL7Q6ZT98 887 aa23.25■■□□□ 1.31
CCDC61-201ENST00000536603 NBPF5PQ86XG9 351 aaPredicted RBP23.25■■□□□ 1.31
CCDC61-201ENST00000536603 MASTLQ96GX5 879 aa23.25■■□□□ 1.31
CCDC61-201ENST00000536603 HSPA1AP0DMV8 641 aaKnown RBP23.24■■□□□ 1.31
CCDC61-201ENST00000536603 HSPA1BP0DMV9 641 aaKnown RBP23.24■■□□□ 1.31
CCDC61-201ENST00000536603 SRGNP10124 158 aa23.24■■□□□ 1.31
CCDC61-201ENST00000536603 CLEC4GQ6UXB4 293 aa23.24■■□□□ 1.31
CCDC61-201ENST00000536603 LRP10Q7Z4F1 713 aa23.24■■□□□ 1.31
CCDC61-201ENST00000536603 ZNF652Q9Y2D9 606 aa23.24■■□□□ 1.31
CCDC61-201ENST00000536603 LTBP3Q9NS15 1303 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms