RNA–Protein interactions for RNA: ENST00000536452.1

CYB561A3-206, Transcript of cytochrome b561 family member A3, humanhuman

TSL 2

Gene CYB561A3, Length 1,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-206ENST00000536452 KLHL34Q8N239 644 aa16.69■□□□□ 0.26
CYB561A3-206ENST00000536452 ZBTB1Q9Y2K1 713 aa16.69■□□□□ 0.26
CYB561A3-206ENST00000536452 PCDHB15Q9Y5E8 787 aa16.69■□□□□ 0.26
CYB561A3-206ENST00000536452 SOS1Q07889 1333 aaPredicted RBP16.68■□□□□ 0.26
CYB561A3-206ENST00000536452 TWISTNBQ3B726 338 aaPredicted RBP16.68■□□□□ 0.26
CYB561A3-206ENST00000536452 SKAP1Q86WV1 359 aa16.68■□□□□ 0.26
CYB561A3-206ENST00000536452 CHMP4BQ9H444 224 aaKnown RBP16.68■□□□□ 0.26
CYB561A3-206ENST00000536452 SCN7AQ01118 1682 aa16.67■□□□□ 0.26
CYB561A3-206ENST00000536452 FAM161AQ3B820 660 aa16.67■□□□□ 0.26
CYB561A3-206ENST00000536452 MRPL50Q8N5N7 158 aaKnown RBP16.67■□□□□ 0.26
CYB561A3-206ENST00000536452 FMNL2Q96PY5 1086 aa16.67■□□□□ 0.26
CYB561A3-206ENST00000536452 MIS18AQ9NYP9 233 aa16.67■□□□□ 0.26
CYB561A3-206ENST00000536452 SRP68Q9UHB9 627 aaKnown RBP16.67■□□□□ 0.26
CYB561A3-206ENST00000536452 COL15A1P39059 1388 aa16.67■□□□□ 0.26
CYB561A3-206ENST00000536452 KIF13BQ9NQT8 1826 aa16.67■□□□□ 0.26
CYB561A3-206ENST00000536452 PRAMEF22A3QJZ6 481 aa16.66■□□□□ 0.26
CYB561A3-206ENST00000536452 CHL1O00533 1208 aa16.66■□□□□ 0.26
CYB561A3-206ENST00000536452 GYS1P13807 737 aa16.66■□□□□ 0.26
CYB561A3-206ENST00000536452 RFC4P35249 363 aa16.66■□□□□ 0.26
CYB561A3-206ENST00000536452 ITPRIPQ8IWB1 547 aa16.66■□□□□ 0.26
CYB561A3-206ENST00000536452 NLGN2Q8NFZ4 835 aa16.66■□□□□ 0.26
CYB561A3-206ENST00000536452 USP42Q9H9J4 1324 aaKnown RBP16.66■□□□□ 0.26
CYB561A3-206ENST00000536452 KIAA1551Q9HCM1 1747 aa16.66■□□□□ 0.26
CYB561A3-206ENST00000536452 TAF7Q15545 349 aaPredicted RBP16.66■□□□□ 0.26
CYB561A3-206ENST00000536452 TSPYL6Q8N831 410 aa16.66■□□□□ 0.26
CYB561A3-206ENST00000536452 IPO9Q96P70 1041 aaKnown RBP16.66■□□□□ 0.26
CYB561A3-206ENST00000536452 ANP32EQ9BTT0 268 aa16.66■□□□□ 0.26
CYB561A3-206ENST00000536452 TMEM57Q8N5G2 664 aa16.65■□□□□ 0.26
CYB561A3-206ENST00000536452 BCORQ6W2J9 1755 aa16.65■□□□□ 0.26
CYB561A3-206ENST00000536452 RGS3P49796 1198 aa16.64■□□□□ 0.25
CYB561A3-206ENST00000536452 HDAC1Q13547 482 aaPredicted RBP16.64■□□□□ 0.25
CYB561A3-206ENST00000536452 STARD3NLO95772 234 aa16.63■□□□□ 0.25
CYB561A3-206ENST00000536452 MMP10P09238 476 aa16.63■□□□□ 0.25
CYB561A3-206ENST00000536452 C8orf58Q8NAV2 365 aa16.63■□□□□ 0.25
CYB561A3-206ENST00000536452 AFDNP55196 1824 aaKnown RBP16.63■□□□□ 0.25
CYB561A3-206ENST00000536452 ERICH6Q7L0X2 663 aa16.63■□□□□ 0.25
CYB561A3-206ENST00000536452 ZBTB40Q9NUA8 1239 aa16.63■□□□□ 0.25
CYB561A3-206ENST00000536452 N4BP2Q86UW6 1770 aaPredicted RBP16.62■□□□□ 0.25
CYB561A3-206ENST00000536452 USP16Q9Y5T5 823 aa16.62■□□□□ 0.25
CYB561A3-206ENST00000536452 A1BGP04217 495 aa16.61■□□□□ 0.25
CYB561A3-206ENST00000536452 NLGN1Q8N2Q7 840 aa16.61■□□□□ 0.25
CYB561A3-206ENST00000536452 TEX13AQ9BXU3 409 aaPredicted RBP16.61■□□□□ 0.25
CYB561A3-206ENST00000536452 ELL2O00472 640 aaPredicted RBP16.61■□□□□ 0.25
CYB561A3-206ENST00000536452 PIP4K2AP48426 406 aaPredicted RBP16.61■□□□□ 0.25
CYB561A3-206ENST00000536452 EIF5P55010 431 aaKnown RBP16.61■□□□□ 0.25
CYB561A3-206ENST00000536452 C8orf34Q49A92 452 aa16.61■□□□□ 0.25
CYB561A3-206ENST00000536452 USPL1Q5W0Q7 1092 aa16.61■□□□□ 0.25
CYB561A3-206ENST00000536452 API5Q9BZZ5 524 aaKnown RBP16.61■□□□□ 0.25
CYB561A3-206ENST00000536452 NRXN2Q9P2S2 1712 aa16.6■□□□□ 0.25
CYB561A3-206ENST00000536452 BRCA1P38398 1863 aaKnown RBP16.59■□□□□ 0.25
CYB561A3-206ENST00000536452 SNRPA1P09661 255 aaKnown RBP16.59■□□□□ 0.25
CYB561A3-206ENST00000536452 NARFQ9UHQ1 456 aa16.59■□□□□ 0.25
CYB561A3-206ENST00000536452 NOP58Q9Y2X3 529 aaKnown RBP16.59■□□□□ 0.25
CYB561A3-206ENST00000536452 C10orf71Q711Q0 1435 aa16.59■□□□□ 0.25
CYB561A3-206ENST00000536452 DDR1Q08345 913 aa16.59■□□□□ 0.25
CYB561A3-206ENST00000536452 BCL2L12Q9HB09 334 aa16.59■□□□□ 0.25
CYB561A3-206ENST00000536452 ZNF330Q9Y3S2 320 aaPredicted RBP16.59■□□□□ 0.25
CYB561A3-206ENST00000536452 CD2APQ9Y5K6 639 aa16.59■□□□□ 0.25
CYB561A3-206ENST00000536452 CHD4Q14839 1912 aa16.58■□□□□ 0.25
CYB561A3-206ENST00000536452 ZBTB7BO15156 539 aaPredicted RBP16.58■□□□□ 0.24
CYB561A3-206ENST00000536452 ZPR1O75312 459 aa16.58■□□□□ 0.24
CYB561A3-206ENST00000536452 EIF4A1P60842 406 aaKnown RBP16.58■□□□□ 0.24
CYB561A3-206ENST00000536452 ZBTB47Q9UFB7 747 aaPredicted RBP16.58■□□□□ 0.24
CYB561A3-206ENST00000536452 PDZRN3Q9UPQ7 1066 aa16.58■□□□□ 0.24
CYB561A3-206ENST00000536452 ABCC4O15439 1325 aa16.58■□□□□ 0.24
CYB561A3-206ENST00000536452 IL6STP40189 918 aaPredicted RBP16.57■□□□□ 0.24
CYB561A3-206ENST00000536452 TSPYL4Q9UJ04 414 aa16.57■□□□□ 0.24
CYB561A3-206ENST00000536452 PXDNLA1KZ92 1463 aa16.57■□□□□ 0.24
CYB561A3-206ENST00000536452 GIGYF1O75420 1035 aaPredicted RBP16.56■□□□□ 0.24
CYB561A3-206ENST00000536452 NPM2Q86SE8 214 aaKnown RBP16.56■□□□□ 0.24
CYB561A3-206ENST00000536452 BABAM1Q9NWV8 329 aa16.56■□□□□ 0.24
CYB561A3-206ENST00000536452 NBPF26B4DH59 902 aa16.56■□□□□ 0.24
CYB561A3-206ENST00000536452 NBPF10Q6P3W6 841 aaKnown RBP16.56■□□□□ 0.24
CYB561A3-206ENST00000536452 NBPF15Q8N660 670 aa16.56■□□□□ 0.24
CYB561A3-206ENST00000536452 TBC1D2BQ9UPU7 963 aa16.56■□□□□ 0.24
CYB561A3-206ENST00000536452 TM4SF1P30408 202 aa16.55■□□□□ 0.24
CYB561A3-206ENST00000536452 SMC5Q8IY18 1101 aa16.55■□□□□ 0.24
CYB561A3-206ENST00000536452 PARP3Q9Y6F1 533 aa16.55■□□□□ 0.24
CYB561A3-206ENST00000536452 POLRMTO00411 1230 aaKnown RBP16.54■□□□□ 0.24
CYB561A3-206ENST00000536452 DDRGK1Q96HY6 314 aa16.54■□□□□ 0.24
CYB561A3-206ENST00000536452 PTPRCP08575 1304 aa16.54■□□□□ 0.24
CYB561A3-206ENST00000536452 ANKRD31Q8N7Z5 1873 aa16.54■□□□□ 0.24
CYB561A3-206ENST00000536452 DCAF8L1A6NGE4 600 aa16.54■□□□□ 0.24
CYB561A3-206ENST00000536452 YBX3P16989 372 aaKnown RBP eCLIP16.54■□□□□ 0.244e-6■□□□□ 8.3
CYB561A3-206ENST00000536452 NFIXQ14938 502 aa16.54■□□□□ 0.24
CYB561A3-206ENST00000536452 WWC3Q9ULE0 1092 aa16.54■□□□□ 0.24
CYB561A3-206ENST00000536452 A0A087WZG4 1122 aa16.53■□□□□ 0.24
CYB561A3-206ENST00000536452 NUP98P52948 1817 aa16.53■□□□□ 0.24
CYB561A3-206ENST00000536452 CAMTA2O94983 1202 aa16.52■□□□□ 0.24
CYB561A3-206ENST00000536452 GPR162Q16538 588 aa16.52■□□□□ 0.24
CYB561A3-206ENST00000536452 DLEC1Q9Y238 1755 aa16.52■□□□□ 0.24
CYB561A3-206ENST00000536452 KRT24Q2M2I5 525 aa16.52■□□□□ 0.23
CYB561A3-206ENST00000536452 DZIP3Q86Y13 1208 aaKnown RBP16.52■□□□□ 0.23
CYB561A3-206ENST00000536452 TBC1D9BQ66K14 1250 aa16.51■□□□□ 0.23
CYB561A3-206ENST00000536452 INTS3Q68E01 1043 aaKnown RBP16.51■□□□□ 0.23
CYB561A3-206ENST00000536452 BICDL1Q6ZP65 573 aa16.51■□□□□ 0.23
CYB561A3-206ENST00000536452 CARMIL3Q8ND23 1372 aa16.51■□□□□ 0.23
CYB561A3-206ENST00000536452 GCC1Q96CN9 775 aa16.5■□□□□ 0.23
CYB561A3-206ENST00000536452 COL11A2P13942 1736 aaPredicted RBP16.5■□□□□ 0.23
CYB561A3-206ENST00000536452 ARFGEF1Q9Y6D6 1849 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms