RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 ANKRD1Q15327 319 aa15.32■□□□□ 0.04
PTPN21-202ENST00000536337 XAGE3Q8WTP9 111 aa15.32■□□□□ 0.04
PTPN21-202ENST00000536337 EDC3Q96F86 508 aaKnown RBP15.32■□□□□ 0.04
PTPN21-202ENST00000536337 F13A1P00488 732 aa15.32■□□□□ 0.04
PTPN21-202ENST00000536337 ZNF445P59923 1031 aa15.32■□□□□ 0.04
PTPN21-202ENST00000536337 NFXL1Q6ZNB6 911 aa15.32■□□□□ 0.04
PTPN21-202ENST00000536337 TRDNQ13061 729 aa15.31■□□□□ 0.04
PTPN21-202ENST00000536337 RASEFQ8IZ41 740 aa15.31■□□□□ 0.04
PTPN21-202ENST00000536337 GRM8O00222 908 aa15.31■□□□□ 0.04
PTPN21-202ENST00000536337 NFATC2IPQ8NCF5 419 aa15.31■□□□□ 0.04
PTPN21-202ENST00000536337 CABLES1Q8TDN4 633 aa15.31■□□□□ 0.04
PTPN21-202ENST00000536337 MAP3K5Q99683 1374 aa15.3■□□□□ 0.04
PTPN21-202ENST00000536337 PLEKHG3A1L390 1219 aa15.3■□□□□ 0.04
PTPN21-202ENST00000536337 SGSM2O43147 1006 aa15.3■□□□□ 0.04
PTPN21-202ENST00000536337 TPM4P67936 248 aa15.3■□□□□ 0.04
PTPN21-202ENST00000536337 ZBTB3Q9H5J0 574 aa15.3■□□□□ 0.04
PTPN21-202ENST00000536337 SH2B1Q9NRF2 756 aaPredicted RBP15.3■□□□□ 0.04
PTPN21-202ENST00000536337 GLI2P10070 1586 aa15.3■□□□□ 0.04
PTPN21-202ENST00000536337 ROBO2Q9HCK4 1378 aa15.3■□□□□ 0.04
PTPN21-202ENST00000536337 IQGAP1P46940 1657 aa15.3■□□□□ 0.04
PTPN21-202ENST00000536337 GOLIM4O00461 696 aa15.3■□□□□ 0.04
PTPN21-202ENST00000536337 KSR2Q6VAB6 950 aa15.3■□□□□ 0.04
PTPN21-202ENST00000536337 CHST3Q7LGC8 479 aa15.3■□□□□ 0.04
PTPN21-202ENST00000536337 HOMER1Q86YM7 354 aa15.3■□□□□ 0.04
PTPN21-202ENST00000536337 HYPKQ9NX55 129 aa15.3■□□□□ 0.04
PTPN21-202ENST00000536337 BRD1O95696 1058 aa15.3■□□□□ 0.04
PTPN21-202ENST00000536337 HAND2P61296 217 aa15.3■□□□□ 0.04
PTPN21-202ENST00000536337 AMOTQ4VCS5 1084 aa15.3■□□□□ 0.04
PTPN21-202ENST00000536337 CCAR2Q8N163 923 aaKnown RBP15.3■□□□□ 0.04
PTPN21-202ENST00000536337 BRF1Q92994 677 aa15.3■□□□□ 0.04
PTPN21-202ENST00000536337 OFD1O75665 1012 aa15.29■□□□□ 0.04
PTPN21-202ENST00000536337 TSC1Q92574 1164 aa15.29■□□□□ 0.04
PTPN21-202ENST00000536337 INTS4Q96HW7 963 aaKnown RBP15.29■□□□□ 0.04
PTPN21-202ENST00000536337 BICC1Q9H694 974 aaKnown RBP15.29■□□□□ 0.04
PTPN21-202ENST00000536337 DACT1Q9NYF0 836 aa15.29■□□□□ 0.04
PTPN21-202ENST00000536337 KAT6BQ8WYB5 2073 aa15.29■□□□□ 0.04
PTPN21-202ENST00000536337 QRICH2Q9H0J4 1663 aa15.29■□□□□ 0.04
PTPN21-202ENST00000536337 TULP1O00294 542 aaPredicted RBP15.29■□□□□ 0.04
PTPN21-202ENST00000536337 STK38Q15208 465 aa15.29■□□□□ 0.04
PTPN21-202ENST00000536337 TOM1L2Q6ZVM7 507 aa15.29■□□□□ 0.04
PTPN21-202ENST00000536337 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.29■□□□□ 0.04
PTPN21-202ENST00000536337 PNPLA6Q8IY17 1366 aa15.29■□□□□ 0.04
PTPN21-202ENST00000536337 CEP152O94986 1710 aa15.28■□□□□ 0.04
PTPN21-202ENST00000536337 SMC2O95347 1197 aa15.28■□□□□ 0.04
PTPN21-202ENST00000536337 PTH1RQ03431 593 aa15.28■□□□□ 0.04
PTPN21-202ENST00000536337 KIAA0232Q92628 1395 aa15.28■□□□□ 0.04
PTPN21-202ENST00000536337 C16orf45Q96MC5 204 aaPredicted RBP15.28■□□□□ 0.04
PTPN21-202ENST00000536337 ORAI2Q96SN7 254 aa15.28■□□□□ 0.04
PTPN21-202ENST00000536337 PRAMEF22A3QJZ6 481 aa15.28■□□□□ 0.04
PTPN21-202ENST00000536337 HMGN5P82970 282 aaKnown RBP15.28■□□□□ 0.04
PTPN21-202ENST00000536337 CREB3L3Q68CJ9 461 aa15.28■□□□□ 0.04
PTPN21-202ENST00000536337 ANKRD13DQ6ZTN6 518 aa15.28■□□□□ 0.04
PTPN21-202ENST00000536337 PPRC1Q5VV67 1664 aaKnown RBP15.28■□□□□ 0.04
PTPN21-202ENST00000536337 RRP12Q5JTH9 1297 aaKnown RBP15.27■□□□□ 0.04
PTPN21-202ENST00000536337 GCP02774 474 aa15.27■□□□□ 0.04
PTPN21-202ENST00000536337 CCDC129Q6ZRS4 1044 aa15.27■□□□□ 0.04
PTPN21-202ENST00000536337 SBNO1A3KN83 1393 aa15.27■□□□□ 0.03
PTPN21-202ENST00000536337 HSPA4P34932 840 aa15.27■□□□□ 0.03
PTPN21-202ENST00000536337 CBX1P83916 185 aa15.26■□□□□ 0.03
PTPN21-202ENST00000536337 NOLC1Q14978 699 aaKnown RBP eCLIP15.26■□□□□ 0.03
PTPN21-202ENST00000536337 ISM2Q6H9L7 571 aa15.26■□□□□ 0.03
PTPN21-202ENST00000536337 KRT28Q7Z3Y7 464 aa15.26■□□□□ 0.03
PTPN21-202ENST00000536337 CEP126Q9P2H0 1117 aa15.26■□□□□ 0.03
PTPN21-202ENST00000536337 NOL7Q9UMY1 257 aaKnown RBP15.26■□□□□ 0.03
PTPN21-202ENST00000536337 IQSEC2Q5JU85 1478 aa15.26■□□□□ 0.03
PTPN21-202ENST00000536337 ADGRB3O60242 1522 aa15.26■□□□□ 0.03
PTPN21-202ENST00000536337 PROSER3Q2NL68 480 aa15.26■□□□□ 0.03
PTPN21-202ENST00000536337 ADCK5Q3MIX3 580 aa15.26■□□□□ 0.03
PTPN21-202ENST00000536337 CPLX2Q6PUV4 134 aaKnown RBP15.26■□□□□ 0.03
PTPN21-202ENST00000536337 SCAND2PQ9GZW5 306 aaPredicted RBP15.26■□□□□ 0.03
PTPN21-202ENST00000536337 LRRC7Q96NW7 1537 aa15.26■□□□□ 0.03
PTPN21-202ENST00000536337 ZNF165P49910 485 aa15.26■□□□□ 0.03
PTPN21-202ENST00000536337 EIF4A1P60842 406 aaKnown RBP15.26■□□□□ 0.03
PTPN21-202ENST00000536337 AKAP4Q5JQC9 854 aa15.26■□□□□ 0.03
PTPN21-202ENST00000536337 SSH3Q8TE77 659 aa15.26■□□□□ 0.03
PTPN21-202ENST00000536337 NEK1Q96PY6 1258 aa15.26■□□□□ 0.03
PTPN21-202ENST00000536337 PDCL3Q9H2J4 239 aa15.26■□□□□ 0.03
PTPN21-202ENST00000536337 ZDHHC9Q9Y397 364 aa15.26■□□□□ 0.03
PTPN21-202ENST00000536337 CCDC57Q2TAC2 916 aa15.25■□□□□ 0.03
PTPN21-202ENST00000536337 TTC39AQ5SRH9 613 aa15.25■□□□□ 0.03
PTPN21-202ENST00000536337 CHMP4CQ96CF2 233 aa15.25■□□□□ 0.03
PTPN21-202ENST00000536337 ZMYND15Q9H091 742 aa15.25■□□□□ 0.03
PTPN21-202ENST00000536337 PTCH1Q13635 1447 aa15.25■□□□□ 0.03
PTPN21-202ENST00000536337 LMBR1LQ6UX01 489 aa15.25■□□□□ 0.03
PTPN21-202ENST00000536337 LUZP1Q86V48 1076 aa15.25■□□□□ 0.03
PTPN21-202ENST00000536337 LINS1Q8NG48 757 aa15.25■□□□□ 0.03
PTPN21-202ENST00000536337 UBE2Q2Q8WVN8 375 aa15.25■□□□□ 0.03
PTPN21-202ENST00000536337 TRMT1Q9NXH9 659 aaKnown RBP15.25■□□□□ 0.03
PTPN21-202ENST00000536337 AATKQ6ZMQ8 1374 aa15.25■□□□□ 0.03
PTPN21-202ENST00000536337 BIN1O00499 593 aa15.25■□□□□ 0.03
PTPN21-202ENST00000536337 POLR3DP05423 398 aaPredicted RBP15.25■□□□□ 0.03
PTPN21-202ENST00000536337 TRIM29Q14134 588 aa15.25■□□□□ 0.03
PTPN21-202ENST00000536337 CCDC82Q8N4S0 544 aa15.25■□□□□ 0.03
PTPN21-202ENST00000536337 CFAP45Q9UL16 551 aa15.25■□□□□ 0.03
PTPN21-202ENST00000536337 PRDM11Q9NQV5 511 aa15.24■□□□□ 0.03
PTPN21-202ENST00000536337 RAD50Q92878 1312 aa15.24■□□□□ 0.03
PTPN21-202ENST00000536337 IFIT1P09914 478 aaKnown RBP15.24■□□□□ 0.03
PTPN21-202ENST00000536337 GTF2E1P29083 439 aaPredicted RBP15.24■□□□□ 0.03
PTPN21-202ENST00000536337 KRT32Q14532 448 aa15.24■□□□□ 0.03
PTPN21-202ENST00000536337 CCDC158Q5M9N0 1113 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms