RNA–Protein interactions for RNA: ENST00000536013.5

PTPN6-207, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 602 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-207ENST00000536013 ZNF521Q96K83 1311 aa16.79■□□□□ 0.28
PTPN6-207ENST00000536013 DCAF8L1A6NGE4 600 aa16.79■□□□□ 0.28
PTPN6-207ENST00000536013 TTLL7Q6ZT98 887 aa16.79■□□□□ 0.28
PTPN6-207ENST00000536013 C8orf58Q8NAV2 365 aa16.79■□□□□ 0.28
PTPN6-207ENST00000536013 NUP98P52948 1817 aa16.78■□□□□ 0.28
PTPN6-207ENST00000536013 KIF6Q6ZMV9 814 aa16.78■□□□□ 0.28
PTPN6-207ENST00000536013 BICDL1Q6ZP65 573 aa16.78■□□□□ 0.28
PTPN6-207ENST00000536013 MIER1Q8N108 512 aa16.78■□□□□ 0.28
PTPN6-207ENST00000536013 NECTIN2Q92692 538 aa16.78■□□□□ 0.28
PTPN6-207ENST00000536013 TSR2Q969E8 191 aaKnown RBP16.78■□□□□ 0.28
PTPN6-207ENST00000536013 SETDB2Q96T68 719 aa16.78■□□□□ 0.28
PTPN6-207ENST00000536013 SALL2Q9Y467 1007 aaPredicted RBP16.78■□□□□ 0.28
PTPN6-207ENST00000536013 ATP10DQ9P241 1426 aa16.78■□□□□ 0.28
PTPN6-207ENST00000536013 ANXA1P04083 346 aa16.77■□□□□ 0.28
PTPN6-207ENST00000536013 HLFQ16534 295 aa16.77■□□□□ 0.28
PTPN6-207ENST00000536013 CHMP4AQ9BY43 222 aa16.77■□□□□ 0.28
PTPN6-207ENST00000536013 CHPF2Q9P2E5 772 aa16.77■□□□□ 0.28
PTPN6-207ENST00000536013 DBF4Q9UBU7 674 aaPredicted RBP16.77■□□□□ 0.28
PTPN6-207ENST00000536013 FANCIQ9NVI1 1328 aa16.76■□□□□ 0.27
PTPN6-207ENST00000536013 N4BP2Q86UW6 1770 aaPredicted RBP16.76■□□□□ 0.27
PTPN6-207ENST00000536013 BRCA1P38398 1863 aaKnown RBP16.76■□□□□ 0.27
PTPN6-207ENST00000536013 ELL2O00472 640 aaPredicted RBP16.75■□□□□ 0.27
PTPN6-207ENST00000536013 PRR5LQ6MZQ0 368 aa16.75■□□□□ 0.27
PTPN6-207ENST00000536013 COPS6Q7L5N1 327 aa16.75■□□□□ 0.27
PTPN6-207ENST00000536013 TSPYL6Q8N831 410 aa16.75■□□□□ 0.27
PTPN6-207ENST00000536013 DPEP1P16444 411 aa16.74■□□□□ 0.27
PTPN6-207ENST00000536013 YBX3P16989 372 aaKnown RBP eCLIP16.74■□□□□ 0.27
PTPN6-207ENST00000536013 KCNA3P22001 575 aa16.74■□□□□ 0.27
PTPN6-207ENST00000536013 GPR162Q16538 588 aa16.74■□□□□ 0.27
PTPN6-207ENST00000536013 GIGYF2Q6Y7W6 1299 aaKnown RBP16.74■□□□□ 0.27
PTPN6-207ENST00000536013 XAGE3Q8WTP9 111 aa16.74■□□□□ 0.27
PTPN6-207ENST00000536013 ZBTB3Q9H5J0 574 aa16.74■□□□□ 0.27
PTPN6-207ENST00000536013 SPINK5Q9NQ38 1064 aaPredicted RBP16.74■□□□□ 0.27
PTPN6-207ENST00000536013 HYPKQ9NX55 129 aa16.74■□□□□ 0.27
PTPN6-207ENST00000536013 NIP7Q9Y221 180 aaKnown RBP eCLIP16.74■□□□□ 0.27
PTPN6-207ENST00000536013 ANKRD31Q8N7Z5 1873 aa16.73■□□□□ 0.27
PTPN6-207ENST00000536013 A0A0G2JLW4 131 aa16.73■□□□□ 0.27
PTPN6-207ENST00000536013 CNBD1Q8NA66 436 aa16.73■□□□□ 0.27
PTPN6-207ENST00000536013 BRIP1Q9BX63 1249 aa16.73■□□□□ 0.27
PTPN6-207ENST00000536013 IBTKQ9P2D0 1353 aaPredicted RBP16.73■□□□□ 0.27
PTPN6-207ENST00000536013 GRIN3BO60391 1043 aa16.72■□□□□ 0.27
PTPN6-207ENST00000536013 GOLGA2Q08379 1002 aa16.72■□□□□ 0.27
PTPN6-207ENST00000536013 TWISTNBQ3B726 338 aaPredicted RBP16.72■□□□□ 0.27
PTPN6-207ENST00000536013 CCDC30Q5VVM6 783 aa16.72■□□□□ 0.27
PTPN6-207ENST00000536013 NBPF5PQ86XG9 351 aaPredicted RBP16.72■□□□□ 0.27
PTPN6-207ENST00000536013 ZNF34Q8IZ26 560 aa16.72■□□□□ 0.27
PTPN6-207ENST00000536013 MYH16Q9H6N6 1097 aa16.72■□□□□ 0.27
PTPN6-207ENST00000536013 DLEC1Q9Y238 1755 aa16.72■□□□□ 0.27
PTPN6-207ENST00000536013 AIMP1Q12904 312 aaKnown RBP16.71■□□□□ 0.27
PTPN6-207ENST00000536013 TPTE2Q6XPS3 522 aa16.71■□□□□ 0.27
PTPN6-207ENST00000536013 PDZRN3Q9UPQ7 1066 aa16.71■□□□□ 0.27
PTPN6-207ENST00000536013 UBN2Q6ZU65 1347 aa16.7■□□□□ 0.26
PTPN6-207ENST00000536013 ANKRD36CQ5JPF3 1778 aa16.7■□□□□ 0.26
PTPN6-207ENST00000536013 CHRNA5P30532 468 aa16.7■□□□□ 0.26
PTPN6-207ENST00000536013 ST5P78524 1137 aa16.7■□□□□ 0.26
PTPN6-207ENST00000536013 HSP90AB3PQ58FF7 597 aa16.7■□□□□ 0.26
PTPN6-207ENST00000536013 PELP1Q8IZL8 1130 aaKnown RBP16.7■□□□□ 0.26
PTPN6-207ENST00000536013 PLBD2Q8NHP8 589 aa16.7■□□□□ 0.26
PTPN6-207ENST00000536013 CHD4Q14839 1912 aa16.7■□□□□ 0.26
PTPN6-207ENST00000536013 CACNA1FO60840 1977 aa16.69■□□□□ 0.26
PTPN6-207ENST00000536013 PDE6BP35913 854 aa16.69■□□□□ 0.26
PTPN6-207ENST00000536013 EXOSC9Q06265 439 aaKnown RBP16.69■□□□□ 0.26
PTPN6-207ENST00000536013 PARP10Q53GL7 1025 aa16.69■□□□□ 0.26
PTPN6-207ENST00000536013 ANKRD13DQ6ZTN6 518 aa16.69■□□□□ 0.26
PTPN6-207ENST00000536013 NYXQ9GZU5 481 aa16.69■□□□□ 0.26
PTPN6-207ENST00000536013 PIM2Q9P1W9 311 aa16.69■□□□□ 0.26
PTPN6-207ENST00000536013 ARFGEF1Q9Y6D6 1849 aa16.68■□□□□ 0.26
PTPN6-207ENST00000536013 KLRG2A4D1S0 409 aaPredicted RBP16.68■□□□□ 0.26
PTPN6-207ENST00000536013 VAMP4O75379 141 aa16.68■□□□□ 0.26
PTPN6-207ENST00000536013 GPTP24298 496 aa16.68■□□□□ 0.26
PTPN6-207ENST00000536013 TCIRG1Q13488 830 aa16.68■□□□□ 0.26
PTPN6-207ENST00000536013 RIC1Q4ADV7 1423 aa16.68■□□□□ 0.26
PTPN6-207ENST00000536013 COL11A2P13942 1736 aaPredicted RBP16.67■□□□□ 0.26
PTPN6-207ENST00000536013 E9PSI1 815 aa16.67■□□□□ 0.26
PTPN6-207ENST00000536013 H0YIN7 160 aa16.67■□□□□ 0.26
PTPN6-207ENST00000536013 NPHP1O15259 732 aa16.67■□□□□ 0.26
PTPN6-207ENST00000536013 SUSD4Q5VX71 490 aa16.67■□□□□ 0.26
PTPN6-207ENST00000536013 C2CD5Q86YS7 1000 aa16.67■□□□□ 0.26
PTPN6-207ENST00000536013 CCDC24Q8N4L8 307 aa16.67■□□□□ 0.26
PTPN6-207ENST00000536013 PHAXQ9H814 394 aaKnown RBP16.67■□□□□ 0.26
PTPN6-207ENST00000536013 WWC3Q9ULE0 1092 aa16.67■□□□□ 0.26
PTPN6-207ENST00000536013 ARFGEF2Q9Y6D5 1785 aa16.66■□□□□ 0.26
PTPN6-207ENST00000536013 NTSR2O95665 410 aa16.66■□□□□ 0.26
PTPN6-207ENST00000536013 DALRD3Q5D0E6 543 aaKnown RBP16.66■□□□□ 0.26
PTPN6-207ENST00000536013 STK31Q9BXU1 1019 aa16.66■□□□□ 0.26
PTPN6-207ENST00000536013 BCS1LQ9Y276 419 aa16.66■□□□□ 0.26
PTPN6-207ENST00000536013 RNF123Q5XPI4 1314 aa16.66■□□□□ 0.26
PTPN6-207ENST00000536013 ABCC12Q96J65 1359 aa16.65■□□□□ 0.26
PTPN6-207ENST00000536013 FAM177BA6PVY3 158 aa16.65■□□□□ 0.26
PTPN6-207ENST00000536013 SRGNP10124 158 aa16.65■□□□□ 0.26
PTPN6-207ENST00000536013 SLFN5Q08AF3 891 aa16.65■□□□□ 0.26
PTPN6-207ENST00000536013 PPP1R42Q7Z4L9 355 aa16.65■□□□□ 0.26
PTPN6-207ENST00000536013 NLRP10Q86W26 655 aa16.65■□□□□ 0.26
PTPN6-207ENST00000536013 ISCA1Q9BUE6 129 aa16.65■□□□□ 0.26
PTPN6-207ENST00000536013 TRIM28Q13263 835 aaKnown RBP16.64■□□□□ 0.25
PTPN6-207ENST00000536013 TRMT2AQ8IZ69 625 aaKnown RBP16.64■□□□□ 0.25
PTPN6-207ENST00000536013 UTP14AQ9BVJ6 771 aaKnown RBP16.64■□□□□ 0.25
PTPN6-207ENST00000536013 TNRC6CQ9HCJ0 1690 aaKnown RBP16.63■□□□□ 0.25
PTPN6-207ENST00000536013 DDX58O95786 925 aaKnown RBP16.63■□□□□ 0.25
PTPN6-207ENST00000536013 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms