RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 TTLL7Q6ZT98 887 aa28.76■■■□□ 2.19
VPS37C-202ENST00000535818 MAP3K15Q6ZN16 1313 aa28.75■■■□□ 2.19
VPS37C-202ENST00000535818 NRXN2Q9P2S2 1712 aa28.75■■■□□ 2.19
VPS37C-202ENST00000535818 RGL2O15211 777 aa28.75■■■□□ 2.19
VPS37C-202ENST00000535818 NPHP1O15259 732 aa28.75■■■□□ 2.19
VPS37C-202ENST00000535818 TGFB2P61812 414 aa28.75■■■□□ 2.19
VPS37C-202ENST00000535818 DDX21Q9NR30 783 aaKnown RBP eCLIP28.75■■■□□ 2.19
VPS37C-202ENST00000535818 CHPF2Q9P2E5 772 aa28.75■■■□□ 2.19
VPS37C-202ENST00000535818 PXDNLA1KZ92 1463 aa28.74■■■□□ 2.19
VPS37C-202ENST00000535818 MIER1Q8N108 512 aa28.74■■■□□ 2.19
VPS37C-202ENST00000535818 ZBTB3Q9H5J0 574 aa28.74■■■□□ 2.19
VPS37C-202ENST00000535818 ERVV-1B6SEH8 477 aa28.73■■■□□ 2.19
VPS37C-202ENST00000535818 HLFQ16534 295 aa28.73■■■□□ 2.19
VPS37C-202ENST00000535818 C8orf58Q8NAV2 365 aa28.73■■■□□ 2.19
VPS37C-202ENST00000535818 NIP7Q9Y221 180 aaKnown RBP eCLIP28.73■■■□□ 2.19
VPS37C-202ENST00000535818 N4BP2Q86UW6 1770 aaPredicted RBP28.73■■■□□ 2.19
VPS37C-202ENST00000535818 DBF4Q9UBU7 674 aaPredicted RBP28.72■■■□□ 2.19
VPS37C-202ENST00000535818 WWC3Q9ULE0 1092 aa28.72■■■□□ 2.19
VPS37C-202ENST00000535818 AIMP1Q12904 312 aaKnown RBP28.71■■■□□ 2.19
VPS37C-202ENST00000535818 LRP10Q7Z4F1 713 aa28.71■■■□□ 2.19
VPS37C-202ENST00000535818 KIAA1551Q9HCM1 1747 aa28.71■■■□□ 2.19
VPS37C-202ENST00000535818 A0A0G2JLW4 131 aa28.7■■■□□ 2.18
VPS37C-202ENST00000535818 CNBD1Q8NA66 436 aa28.7■■■□□ 2.18
VPS37C-202ENST00000535818 XAGE3Q8WTP9 111 aa28.7■■■□□ 2.18
VPS37C-202ENST00000535818 FANCIQ9NVI1 1328 aa28.69■■■□□ 2.18
VPS37C-202ENST00000535818 DPEP1P16444 411 aa28.69■■■□□ 2.18
VPS37C-202ENST00000535818 COPS6Q7L5N1 327 aa28.69■■■□□ 2.18
VPS37C-202ENST00000535818 CHMP4AQ9BY43 222 aa28.69■■■□□ 2.18
VPS37C-202ENST00000535818 NUP98P52948 1817 aa28.69■■■□□ 2.18
VPS37C-202ENST00000535818 NBPF5PQ86XG9 351 aaPredicted RBP28.68■■■□□ 2.18
VPS37C-202ENST00000535818 YBX3P16989 372 aaKnown RBP eCLIP28.67■■■□□ 2.18
VPS37C-202ENST00000535818 ST5P78524 1137 aa28.67■■■□□ 2.18
VPS37C-202ENST00000535818 PRR5LQ6MZQ0 368 aa28.67■■■□□ 2.18
VPS37C-202ENST00000535818 TSPYL6Q8N831 410 aa28.67■■■□□ 2.18
VPS37C-202ENST00000535818 HYPKQ9NX55 129 aa28.67■■■□□ 2.18
VPS37C-202ENST00000535818 FAM177BA6PVY3 158 aa28.66■■■□□ 2.18
VPS37C-202ENST00000535818 TWISTNBQ3B726 338 aaPredicted RBP28.66■■■□□ 2.18
VPS37C-202ENST00000535818 CCDC30Q5VVM6 783 aa28.66■■■□□ 2.18
VPS37C-202ENST00000535818 GIGYF2Q6Y7W6 1299 aaKnown RBP28.66■■■□□ 2.18
VPS37C-202ENST00000535818 MYH16Q9H6N6 1097 aa28.66■■■□□ 2.18
VPS37C-202ENST00000535818 ATP10DQ9P241 1426 aa28.66■■■□□ 2.18
VPS37C-202ENST00000535818 GOLGA2Q08379 1002 aa28.65■■■□□ 2.18
VPS37C-202ENST00000535818 CCDC24Q8N4L8 307 aa28.65■■■□□ 2.18
VPS37C-202ENST00000535818 GRIN3BO60391 1043 aa28.64■■■□□ 2.18
VPS37C-202ENST00000535818 GPTP24298 496 aa28.64■■■□□ 2.18
VPS37C-202ENST00000535818 CHRNA5P30532 468 aa28.64■■■□□ 2.18
VPS37C-202ENST00000535818 TPTE2Q6XPS3 522 aa28.63■■■□□ 2.17
VPS37C-202ENST00000535818 GTF2E1P29083 439 aaPredicted RBP28.62■■■□□ 2.17
VPS37C-202ENST00000535818 BRIP1Q9BX63 1249 aa28.62■■■□□ 2.17
VPS37C-202ENST00000535818 SPINK5Q9NQ38 1064 aaPredicted RBP28.62■■■□□ 2.17
VPS37C-202ENST00000535818 PIM2Q9P1W9 311 aa28.62■■■□□ 2.17
VPS37C-202ENST00000535818 BCS1LQ9Y276 419 aa28.62■■■□□ 2.17
VPS37C-202ENST00000535818 ZNF521Q96K83 1311 aa28.62■■■□□ 2.17
VPS37C-202ENST00000535818 HSP90AB3PQ58FF7 597 aa28.61■■■□□ 2.17
VPS37C-202ENST00000535818 C2CD5Q86YS7 1000 aa28.61■■■□□ 2.17
VPS37C-202ENST00000535818 STK31Q9BXU1 1019 aa28.61■■■□□ 2.17
VPS37C-202ENST00000535818 ANKRD31Q8N7Z5 1873 aa28.6■■■□□ 2.17
VPS37C-202ENST00000535818 PDE6BP35913 854 aa28.6■■■□□ 2.17
VPS37C-202ENST00000535818 EXOSC9Q06265 439 aaKnown RBP28.6■■■□□ 2.17
VPS37C-202ENST00000535818 NYXQ9GZU5 481 aa28.6■■■□□ 2.17
VPS37C-202ENST00000535818 BRCA1P38398 1863 aaKnown RBP28.59■■■□□ 2.17
VPS37C-202ENST00000535818 H0YIN7 160 aa28.59■■■□□ 2.17
VPS37C-202ENST00000535818 KCNA3P22001 575 aa28.59■■■□□ 2.17
VPS37C-202ENST00000535818 ZNF34Q8IZ26 560 aa28.59■■■□□ 2.17
VPS37C-202ENST00000535818 PLBD2Q8NHP8 589 aa28.59■■■□□ 2.17
VPS37C-202ENST00000535818 UBN2Q6ZU65 1347 aa28.59■■■□□ 2.17
VPS37C-202ENST00000535818 ANKRD13DQ6ZTN6 518 aa28.58■■■□□ 2.17
VPS37C-202ENST00000535818 PHAXQ9H814 394 aaKnown RBP28.58■■■□□ 2.17
VPS37C-202ENST00000535818 PDZRN3Q9UPQ7 1066 aa28.58■■■□□ 2.17
VPS37C-202ENST00000535818 ANKRD36CQ5JPF3 1778 aa28.57■■■□□ 2.16
VPS37C-202ENST00000535818 TCERG1O14776 1098 aaKnown RBP28.57■■■□□ 2.16
VPS37C-202ENST00000535818 PARP10Q53GL7 1025 aa28.57■■■□□ 2.16
VPS37C-202ENST00000535818 DALRD3Q5D0E6 543 aaKnown RBP28.57■■■□□ 2.16
VPS37C-202ENST00000535818 PPP1R42Q7Z4L9 355 aa28.56■■■□□ 2.16
VPS37C-202ENST00000535818 DLEC1Q9Y238 1755 aa28.56■■■□□ 2.16
VPS37C-202ENST00000535818 IBTKQ9P2D0 1353 aaPredicted RBP28.55■■■□□ 2.16
VPS37C-202ENST00000535818 SUSD4Q5VX71 490 aa28.55■■■□□ 2.16
VPS37C-202ENST00000535818 TCIRG1Q13488 830 aa28.54■■■□□ 2.16
VPS37C-202ENST00000535818 RIC3Q7Z5B4 369 aa28.54■■■□□ 2.16
VPS37C-202ENST00000535818 NUTM1Q86Y26 1132 aa28.54■■■□□ 2.16
VPS37C-202ENST00000535818 ZNF622Q969S3 477 aaKnown RBP eCLIP28.54■■■□□ 2.16
VPS37C-202ENST00000535818 COL11A2P13942 1736 aaPredicted RBP28.53■■■□□ 2.16
VPS37C-202ENST00000535818 E9PSI1 815 aa28.53■■■□□ 2.16
VPS37C-202ENST00000535818 DDX58O95786 925 aaKnown RBP28.53■■■□□ 2.16
VPS37C-202ENST00000535818 YY1P25490 414 aa28.53■■■□□ 2.16
VPS37C-202ENST00000535818 CHD4Q14839 1912 aa28.53■■■□□ 2.16
VPS37C-202ENST00000535818 ARFGEF2Q9Y6D5 1785 aa28.52■■■□□ 2.16
VPS37C-202ENST00000535818 VAMP4O75379 141 aa28.52■■■□□ 2.16
VPS37C-202ENST00000535818 NTSR2O95665 410 aa28.51■■■□□ 2.15
VPS37C-202ENST00000535818 ERFEQ4G0M1 354 aa28.51■■■□□ 2.15
VPS37C-202ENST00000535818 TTLL6Q8N841 843 aa28.51■■■□□ 2.15
VPS37C-202ENST00000535818 UTP14AQ9BVJ6 771 aaKnown RBP28.51■■■□□ 2.15
VPS37C-202ENST00000535818 ABCC12Q96J65 1359 aa28.5■■■□□ 2.15
VPS37C-202ENST00000535818 ARFGEF1Q9Y6D6 1849 aa28.5■■■□□ 2.15
VPS37C-202ENST00000535818 SLC4A2P04920 1241 aa28.5■■■□□ 2.15
VPS37C-202ENST00000535818 NLRP10Q86W26 655 aa28.49■■■□□ 2.15
VPS37C-202ENST00000535818 MASTLQ96GX5 879 aa28.48■■■□□ 2.15
VPS37C-202ENST00000535818 ATP5J2-PTCD1G3V325 749 aa28.47■■■□□ 2.15
VPS37C-202ENST00000535818 SRGNP10124 158 aa28.47■■■□□ 2.15
VPS37C-202ENST00000535818 SLFN5Q08AF3 891 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms