RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 BCL2L12Q9HB09 334 aa18.66■□□□□ 0.58
MSRB3-206ENST00000535664 TBC1D2BQ9UPU7 963 aa18.66■□□□□ 0.58
MSRB3-206ENST00000535664 SUPT16HQ9Y5B9 1047 aaKnown RBP18.66■□□□□ 0.58
MSRB3-206ENST00000535664 DDR1Q08345 913 aa18.65■□□□□ 0.58
MSRB3-206ENST00000535664 TWISTNBQ3B726 338 aaPredicted RBP18.65■□□□□ 0.58
MSRB3-206ENST00000535664 PRAMEF22A3QJZ6 481 aa18.64■□□□□ 0.57
MSRB3-206ENST00000535664 SERPINB2P05120 415 aa18.64■□□□□ 0.57
MSRB3-206ENST00000535664 HOXB7P09629 217 aa18.64■□□□□ 0.57
MSRB3-206ENST00000535664 ZNF428Q96B54 188 aa18.64■□□□□ 0.57
MSRB3-206ENST00000535664 CAMTA2O94983 1202 aa18.63■□□□□ 0.57
MSRB3-206ENST00000535664 CARMIL3Q8ND23 1372 aa18.63■□□□□ 0.57
MSRB3-206ENST00000535664 NBPF26B4DH59 902 aa18.62■□□□□ 0.57
MSRB3-206ENST00000535664 ERVV-1B6SEH8 477 aa18.62■□□□□ 0.57
MSRB3-206ENST00000535664 ELL2O00472 640 aaPredicted RBP18.62■□□□□ 0.57
MSRB3-206ENST00000535664 BCAR3O75815 825 aa18.62■□□□□ 0.57
MSRB3-206ENST00000535664 NBPF10Q6P3W6 841 aaKnown RBP18.62■□□□□ 0.57
MSRB3-206ENST00000535664 NBPF15Q8N660 670 aa18.62■□□□□ 0.57
MSRB3-206ENST00000535664 PIM2Q9P1W9 311 aa18.62■□□□□ 0.57
MSRB3-206ENST00000535664 KIF13BQ9NQT8 1826 aa18.61■□□□□ 0.57
MSRB3-206ENST00000535664 RRP1P56182 461 aaKnown RBP18.61■□□□□ 0.57
MSRB3-206ENST00000535664 ALDH1L2Q3SY69 923 aa18.61■□□□□ 0.57
MSRB3-206ENST00000535664 KIF6Q6ZMV9 814 aa18.61■□□□□ 0.57
MSRB3-206ENST00000535664 SSH1Q8WYL5 1049 aa18.61■□□□□ 0.57
MSRB3-206ENST00000535664 YBX3P16989 372 aaKnown RBP eCLIP18.6■□□□□ 0.57
MSRB3-206ENST00000535664 TBC1D9BQ66K14 1250 aa18.6■□□□□ 0.57
MSRB3-206ENST00000535664 LAMB4A4D0S4 1761 aa18.6■□□□□ 0.57
MSRB3-206ENST00000535664 PXDNLA1KZ92 1463 aa18.59■□□□□ 0.57
MSRB3-206ENST00000535664 A0A0G2JLW4 131 aa18.59■□□□□ 0.57
MSRB3-206ENST00000535664 NPHP1O15259 732 aa18.59■□□□□ 0.57
MSRB3-206ENST00000535664 DPEP1P16444 411 aa18.59■□□□□ 0.57
MSRB3-206ENST00000535664 PDE6BP35913 854 aa18.59■□□□□ 0.57
MSRB3-206ENST00000535664 BRPF1P55201 1214 aaPredicted RBP18.59■□□□□ 0.57
MSRB3-206ENST00000535664 BICDL1Q6ZP65 573 aa18.59■□□□□ 0.57
MSRB3-206ENST00000535664 BRIP1Q9BX63 1249 aa18.59■□□□□ 0.57
MSRB3-206ENST00000535664 ST5P78524 1137 aa18.58■□□□□ 0.56
MSRB3-206ENST00000535664 TPTE2Q6XPS3 522 aa18.58■□□□□ 0.56
MSRB3-206ENST00000535664 BCL2L13Q9BXK5 485 aa18.58■□□□□ 0.56
MSRB3-206ENST00000535664 SCN7AQ01118 1682 aa18.57■□□□□ 0.56
MSRB3-206ENST00000535664 H0YIN7 160 aa18.57■□□□□ 0.56
MSRB3-206ENST00000535664 EIF2S2P20042 333 aaKnown RBP18.57■□□□□ 0.56
MSRB3-206ENST00000535664 PIP4K2AP48426 406 aaPredicted RBP18.57■□□□□ 0.56
MSRB3-206ENST00000535664 DALRD3Q5D0E6 543 aaKnown RBP18.57■□□□□ 0.56
MSRB3-206ENST00000535664 MRPL50Q8N5N7 158 aaKnown RBP18.57■□□□□ 0.56
MSRB3-206ENST00000535664 CNBD1Q8NA66 436 aa18.57■□□□□ 0.56
MSRB3-206ENST00000535664 SMC4Q9NTJ3 1288 aa18.57■□□□□ 0.56
MSRB3-206ENST00000535664 MAP3K15Q6ZN16 1313 aa18.56■□□□□ 0.56
MSRB3-206ENST00000535664 MYL6BP14649 208 aa18.56■□□□□ 0.56
MSRB3-206ENST00000535664 NYXQ9GZU5 481 aa18.56■□□□□ 0.56
MSRB3-206ENST00000535664 DDX21Q9NR30 783 aaKnown RBP eCLIP18.56■□□□□ 0.56
MSRB3-206ENST00000535664 NIP7Q9Y221 180 aaKnown RBP eCLIP18.56■□□□□ 0.56
MSRB3-206ENST00000535664 BCS1LQ9Y276 419 aa18.56■□□□□ 0.56
MSRB3-206ENST00000535664 NRXN2Q9P2S2 1712 aa18.55■□□□□ 0.56
MSRB3-206ENST00000535664 KCNA3P22001 575 aa18.55■□□□□ 0.56
MSRB3-206ENST00000535664 NBPF5PQ86XG9 351 aaPredicted RBP18.55■□□□□ 0.56
MSRB3-206ENST00000535664 DBF4Q9UBU7 674 aaPredicted RBP18.55■□□□□ 0.56
MSRB3-206ENST00000535664 PLIN1O60240 522 aa18.54■□□□□ 0.56
MSRB3-206ENST00000535664 PRR5LQ6MZQ0 368 aa18.54■□□□□ 0.56
MSRB3-206ENST00000535664 CHD4Q14839 1912 aa18.54■□□□□ 0.56
MSRB3-206ENST00000535664 TCERG1O14776 1098 aaKnown RBP18.53■□□□□ 0.56
MSRB3-206ENST00000535664 HSP90AB3PQ58FF7 597 aa18.53■□□□□ 0.56
MSRB3-206ENST00000535664 HDGFL1Q5TGJ6 251 aa18.53■□□□□ 0.56
MSRB3-206ENST00000535664 C2CD5Q86YS7 1000 aa18.53■□□□□ 0.56
MSRB3-206ENST00000535664 KIF16BQ96L93 1317 aa18.52■□□□□ 0.56
MSRB3-206ENST00000535664 GTF2E1P29083 439 aaPredicted RBP18.52■□□□□ 0.56
MSRB3-206ENST00000535664 PDIA6Q15084 440 aa18.52■□□□□ 0.56
MSRB3-206ENST00000535664 GIGYF2Q6Y7W6 1299 aaKnown RBP18.52■□□□□ 0.56
MSRB3-206ENST00000535664 TTLL6Q8N841 843 aa18.52■□□□□ 0.56
MSRB3-206ENST00000535664 HYPKQ9NX55 129 aa18.52■□□□□ 0.56
MSRB3-206ENST00000535664 BCORQ6W2J9 1755 aa18.52■□□□□ 0.55
MSRB3-206ENST00000535664 ATP10DQ9P241 1426 aa18.51■□□□□ 0.55
MSRB3-206ENST00000535664 PARP10Q53GL7 1025 aa18.51■□□□□ 0.55
MSRB3-206ENST00000535664 CCDC30Q5VVM6 783 aa18.51■□□□□ 0.55
MSRB3-206ENST00000535664 CHRNA5P30532 468 aa18.5■□□□□ 0.55
MSRB3-206ENST00000535664 HLFQ16534 295 aa18.5■□□□□ 0.55
MSRB3-206ENST00000535664 TTLL7Q6ZT98 887 aa18.5■□□□□ 0.55
MSRB3-206ENST00000535664 PPP1R42Q7Z4L9 355 aa18.5■□□□□ 0.55
MSRB3-206ENST00000535664 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.5■□□□□ 0.55
MSRB3-206ENST00000535664 CNKSR1Q969H4 720 aa18.5■□□□□ 0.55
MSRB3-206ENST00000535664 TNNQ9UQP3 1299 aa18.5■□□□□ 0.55
MSRB3-206ENST00000535664 KIAA1551Q9HCM1 1747 aa18.49■□□□□ 0.55
MSRB3-206ENST00000535664 AFDNP55196 1824 aaKnown RBP18.49■□□□□ 0.55
MSRB3-206ENST00000535664 C20orf194Q5TEA3 1177 aa18.49■□□□□ 0.55
MSRB3-206ENST00000535664 STYK1Q6J9G0 422 aa18.49■□□□□ 0.55
MSRB3-206ENST00000535664 ARHGAP27Q6ZUM4 889 aa18.49■□□□□ 0.55
MSRB3-206ENST00000535664 COPS6Q7L5N1 327 aa18.49■□□□□ 0.55
MSRB3-206ENST00000535664 LRP10Q7Z4F1 713 aa18.49■□□□□ 0.55
MSRB3-206ENST00000535664 NECTIN2Q92692 538 aa18.49■□□□□ 0.55
MSRB3-206ENST00000535664 ZBTB3Q9H5J0 574 aa18.49■□□□□ 0.55
MSRB3-206ENST00000535664 NOB1Q9ULX3 412 aaKnown RBP18.49■□□□□ 0.55
MSRB3-206ENST00000535664 IBTKQ9P2D0 1353 aaPredicted RBP18.49■□□□□ 0.55
MSRB3-206ENST00000535664 CACNA1FO60840 1977 aa18.49■□□□□ 0.55
MSRB3-206ENST00000535664 N4BP2Q86UW6 1770 aaPredicted RBP18.48■□□□□ 0.55
MSRB3-206ENST00000535664 IRX6P78412 446 aaPredicted RBP18.48■□□□□ 0.55
MSRB3-206ENST00000535664 ZKSCAN2Q63HK3 967 aa18.48■□□□□ 0.55
MSRB3-206ENST00000535664 ZNF34Q8IZ26 560 aa18.48■□□□□ 0.55
MSRB3-206ENST00000535664 ARHGAP45Q92619 1136 aa18.48■□□□□ 0.55
MSRB3-206ENST00000535664 FRAT1Q92837 279 aaPredicted RBP18.48■□□□□ 0.55
MSRB3-206ENST00000535664 MASTLQ96GX5 879 aa18.48■□□□□ 0.55
MSRB3-206ENST00000535664 CHPF2Q9P2E5 772 aa18.48■□□□□ 0.55
MSRB3-206ENST00000535664 KLRG2A4D1S0 409 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms