RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 TEX13AQ9BXU3 409 aaPredicted RBP17.03■□□□□ 0.32
CHFR-210ENST00000535527 COL11A2P13942 1736 aaPredicted RBP17.03■□□□□ 0.32
CHFR-210ENST00000535527 BRCA1P38398 1863 aaKnown RBP17.02■□□□□ 0.32
CHFR-210ENST00000535527 TNRC6CQ9HCJ0 1690 aaKnown RBP17.02■□□□□ 0.32
CHFR-210ENST00000535527 CAMTA2O94983 1202 aa17.02■□□□□ 0.32
CHFR-210ENST00000535527 ADRA2BP18089 450 aa17.02■□□□□ 0.32
CHFR-210ENST00000535527 HNRNPUQ00839 825 aaKnown RBP eCLIP17.02■□□□□ 0.32
CHFR-210ENST00000535527 SLFN5Q08AF3 891 aa17.02■□□□□ 0.32
CHFR-210ENST00000535527 FKBP8Q14318 412 aa17.02■□□□□ 0.32
CHFR-210ENST00000535527 USPL1Q5W0Q7 1092 aa17.02■□□□□ 0.32
CHFR-210ENST00000535527 TTLL7Q6ZT98 887 aa17.02■□□□□ 0.32
CHFR-210ENST00000535527 TRMT2AQ8IZ69 625 aaKnown RBP17.02■□□□□ 0.32
CHFR-210ENST00000535527 CHPF2Q9P2E5 772 aa17.02■□□□□ 0.32
CHFR-210ENST00000535527 TBC1D2BQ9UPU7 963 aa17.02■□□□□ 0.32
CHFR-210ENST00000535527 ZNF330Q9Y3S2 320 aaPredicted RBP17.02■□□□□ 0.32
CHFR-210ENST00000535527 N4BP2Q86UW6 1770 aaPredicted RBP17.02■□□□□ 0.31
CHFR-210ENST00000535527 TCERG1O14776 1098 aaKnown RBP17.01■□□□□ 0.31
CHFR-210ENST00000535527 MYL6BP14649 208 aa17.01■□□□□ 0.31
CHFR-210ENST00000535527 DDR1Q08345 913 aa17.01■□□□□ 0.31
CHFR-210ENST00000535527 TRAPPC3LQ5T215 181 aa17.01■□□□□ 0.31
CHFR-210ENST00000535527 NGEFQ8N5V2 710 aa17.01■□□□□ 0.31
CHFR-210ENST00000535527 HOXB7P09629 217 aa17■□□□□ 0.31
CHFR-210ENST00000535527 TGFB2P61812 414 aa17■□□□□ 0.31
CHFR-210ENST00000535527 HDGFL1Q5TGJ6 251 aa17■□□□□ 0.31
CHFR-210ENST00000535527 NARFQ9UHQ1 456 aa17■□□□□ 0.31
CHFR-210ENST00000535527 WWC3Q9ULE0 1092 aa17■□□□□ 0.31
CHFR-210ENST00000535527 GOLGA2Q08379 1002 aa16.99■□□□□ 0.31
CHFR-210ENST00000535527 JMYQ8N9B5 988 aa16.99■□□□□ 0.31
CHFR-210ENST00000535527 RBM46Q8TBY0 533 aaKnown RBP16.99■□□□□ 0.31
CHFR-210ENST00000535527 LAMB2P55268 1798 aa16.99■□□□□ 0.31
CHFR-210ENST00000535527 DLEC1Q9Y238 1755 aa16.99■□□□□ 0.31
CHFR-210ENST00000535527 ERBB4Q15303 1308 aa16.98■□□□□ 0.31
CHFR-210ENST00000535527 VAMP4O75379 141 aa16.98■□□□□ 0.31
CHFR-210ENST00000535527 RFC4P35249 363 aa16.98■□□□□ 0.31
CHFR-210ENST00000535527 HLFQ16534 295 aa16.98■□□□□ 0.31
CHFR-210ENST00000535527 TWISTNBQ3B726 338 aaPredicted RBP16.98■□□□□ 0.31
CHFR-210ENST00000535527 KLRG1Q96E93 195 aa16.98■□□□□ 0.31
CHFR-210ENST00000535527 CARMIL3Q8ND23 1372 aa16.98■□□□□ 0.31
CHFR-210ENST00000535527 FSTL1Q12841 308 aa16.97■□□□□ 0.31
CHFR-210ENST00000535527 G2E3Q7L622 706 aa16.97■□□□□ 0.31
CHFR-210ENST00000535527 DZIP3Q86Y13 1208 aaKnown RBP16.97■□□□□ 0.31
CHFR-210ENST00000535527 CACNA1SQ13698 1873 aa16.97■□□□□ 0.31
CHFR-210ENST00000535527 ZBED9Q6R2W3 1325 aa16.96■□□□□ 0.31
CHFR-210ENST00000535527 DDX60Q8IY21 1712 aaKnown RBP16.96■□□□□ 0.31
CHFR-210ENST00000535527 TBC1D9BQ66K14 1250 aa16.96■□□□□ 0.31
CHFR-210ENST00000535527 PHAXQ9H814 394 aaKnown RBP16.96■□□□□ 0.31
CHFR-210ENST00000535527 DDX21Q9NR30 783 aaKnown RBP eCLIP16.96■□□□□ 0.31
CHFR-210ENST00000535527 C10orf71Q711Q0 1435 aa16.96■□□□□ 0.3
CHFR-210ENST00000535527 E9PSI1 815 aa16.95■□□□□ 0.3
CHFR-210ENST00000535527 MMP10P09238 476 aa16.95■□□□□ 0.3
CHFR-210ENST00000535527 NFIXQ14938 502 aa16.95■□□□□ 0.3
CHFR-210ENST00000535527 COL13A1Q5TAT6 717 aaPredicted RBP16.95■□□□□ 0.3
CHFR-210ENST00000535527 C16orf71Q8IYS4 520 aaPredicted RBP16.95■□□□□ 0.3
CHFR-210ENST00000535527 XAGE3Q8WTP9 111 aa16.95■□□□□ 0.3
CHFR-210ENST00000535527 BCS1LQ9Y276 419 aa16.95■□□□□ 0.3
CHFR-210ENST00000535527 WDR90Q96KV7 1748 aa16.95■□□□□ 0.3
CHFR-210ENST00000535527 PXDNLA1KZ92 1463 aa16.94■□□□□ 0.3
CHFR-210ENST00000535527 TM4SF1P30408 202 aa16.94■□□□□ 0.3
CHFR-210ENST00000535527 ARHGAP27Q6ZUM4 889 aa16.94■□□□□ 0.3
CHFR-210ENST00000535527 ZBTB3Q9H5J0 574 aa16.94■□□□□ 0.3
CHFR-210ENST00000535527 MYH16Q9H6N6 1097 aa16.94■□□□□ 0.3
CHFR-210ENST00000535527 NMRK2Q9NPI5 230 aa16.94■□□□□ 0.3
CHFR-210ENST00000535527 MAP3K15Q6ZN16 1313 aa16.94■□□□□ 0.3
CHFR-210ENST00000535527 UBN2Q6ZU65 1347 aa16.94■□□□□ 0.3
CHFR-210ENST00000535527 POLRMTO00411 1230 aaKnown RBP16.93■□□□□ 0.3
CHFR-210ENST00000535527 COPS6Q7L5N1 327 aa16.93■□□□□ 0.3
CHFR-210ENST00000535527 NLGN1Q8N2Q7 840 aa16.93■□□□□ 0.3
CHFR-210ENST00000535527 PCNTO95613 3336 aa16.92■□□□□ 0.3
CHFR-210ENST00000535527 COL4A1P02462 1669 aa16.92■□□□□ 0.3
CHFR-210ENST00000535527 PRELPP51888 382 aa16.92■□□□□ 0.3
CHFR-210ENST00000535527 A0A087WZG4 1122 aa16.91■□□□□ 0.3
CHFR-210ENST00000535527 A0A0G2JLW4 131 aa16.91■□□□□ 0.3
CHFR-210ENST00000535527 ZPR1O75312 459 aa16.91■□□□□ 0.3
CHFR-210ENST00000535527 AIMP1Q12904 312 aaKnown RBP16.91■□□□□ 0.3
CHFR-210ENST00000535527 BICDL1Q6ZP65 573 aa16.91■□□□□ 0.3
CHFR-210ENST00000535527 DBF4Q9UBU7 674 aaPredicted RBP16.91■□□□□ 0.3
CHFR-210ENST00000535527 TNS4Q8IZW8 715 aa16.9■□□□□ 0.3
CHFR-210ENST00000535527 ZNF428Q96B54 188 aa16.9■□□□□ 0.3
CHFR-210ENST00000535527 TAF1P21675 1872 aa16.9■□□□□ 0.3
CHFR-210ENST00000535527 KDM2BQ8NHM5 1336 aa16.9■□□□□ 0.3
CHFR-210ENST00000535527 ABCC12Q96J65 1359 aa16.89■□□□□ 0.3
CHFR-210ENST00000535527 CCDC24Q8N4L8 307 aa16.89■□□□□ 0.29
CHFR-210ENST00000535527 DPEP1P16444 411 aa16.88■□□□□ 0.29
CHFR-210ENST00000535527 CCDC30Q5VVM6 783 aa16.88■□□□□ 0.29
CHFR-210ENST00000535527 C9orf131Q5VYM1 1079 aa16.88■□□□□ 0.29
CHFR-210ENST00000535527 BCL2L13Q9BXK5 485 aa16.88■□□□□ 0.29
CHFR-210ENST00000535527 GPTP24298 496 aa16.87■□□□□ 0.29
CHFR-210ENST00000535527 GIGYF2Q6Y7W6 1299 aaKnown RBP16.87■□□□□ 0.29
CHFR-210ENST00000535527 SSH1Q8WYL5 1049 aa16.87■□□□□ 0.29
CHFR-210ENST00000535527 ERVV-1B6SEH8 477 aa16.86■□□□□ 0.29
CHFR-210ENST00000535527 CAPN15O75808 1086 aa16.86■□□□□ 0.29
CHFR-210ENST00000535527 HTRA3P83110 453 aa16.86■□□□□ 0.29
CHFR-210ENST00000535527 KIF6Q6ZMV9 814 aa16.86■□□□□ 0.29
CHFR-210ENST00000535527 ZNF34Q8IZ26 560 aa16.86■□□□□ 0.29
CHFR-210ENST00000535527 MRPL50Q8N5N7 158 aaKnown RBP16.86■□□□□ 0.29
CHFR-210ENST00000535527 HYPKQ9NX55 129 aa16.86■□□□□ 0.29
CHFR-210ENST00000535527 PARP3Q9Y6F1 533 aa16.86■□□□□ 0.29
CHFR-210ENST00000535527 ARFGEF1Q9Y6D6 1849 aa16.86■□□□□ 0.29
CHFR-210ENST00000535527 SLC4A2P04920 1241 aa16.85■□□□□ 0.29
CHFR-210ENST00000535527 SERPINB2P05120 415 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms