RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 C10orf71Q711Q0 1435 aa28.23■■■□□ 2.11
SSPN-204ENST00000535504 MAP3K15Q6ZN16 1313 aa28.22■■■□□ 2.11
SSPN-204ENST00000535504 ELL2O00472 640 aaPredicted RBP28.21■■■□□ 2.11
SSPN-204ENST00000535504 TSR2Q969E8 191 aaKnown RBP28.21■■■□□ 2.11
SSPN-204ENST00000535504 ST5P78524 1137 aa28.2■■■□□ 2.1
SSPN-204ENST00000535504 GOLGA2Q08379 1002 aa28.2■■■□□ 2.1
SSPN-204ENST00000535504 CCDC30Q5VVM6 783 aa28.2■■■□□ 2.1
SSPN-204ENST00000535504 MIER1Q8N108 512 aa28.2■■■□□ 2.1
SSPN-204ENST00000535504 HYPKQ9NX55 129 aa28.2■■■□□ 2.1
SSPN-204ENST00000535504 CHPF2Q9P2E5 772 aa28.2■■■□□ 2.1
SSPN-204ENST00000535504 NIP7Q9Y221 180 aaKnown RBP eCLIP28.2■■■□□ 2.1
SSPN-204ENST00000535504 NBPF5PQ86XG9 351 aaPredicted RBP28.19■■■□□ 2.1
SSPN-204ENST00000535504 CNBD1Q8NA66 436 aa28.19■■■□□ 2.1
SSPN-204ENST00000535504 ZBTB3Q9H5J0 574 aa28.19■■■□□ 2.1
SSPN-204ENST00000535504 GTF2E1P29083 439 aaPredicted RBP28.18■■■□□ 2.1
SSPN-204ENST00000535504 AIMP1Q12904 312 aaKnown RBP28.18■■■□□ 2.1
SSPN-204ENST00000535504 STK31Q9BXU1 1019 aa28.18■■■□□ 2.1
SSPN-204ENST00000535504 GRIN3BO60391 1043 aa28.17■■■□□ 2.1
SSPN-204ENST00000535504 ANXA1P04083 346 aa28.17■■■□□ 2.1
SSPN-204ENST00000535504 HSP90AB3PQ58FF7 597 aa28.17■■■□□ 2.1
SSPN-204ENST00000535504 TTLL7Q6ZT98 887 aa28.17■■■□□ 2.1
SSPN-204ENST00000535504 KIF13BQ9NQT8 1826 aa28.17■■■□□ 2.1
SSPN-204ENST00000535504 PDIA6Q15084 440 aa28.16■■■□□ 2.1
SSPN-204ENST00000535504 TPTE2Q6XPS3 522 aa28.16■■■□□ 2.1
SSPN-204ENST00000535504 COPS6Q7L5N1 327 aa28.16■■■□□ 2.1
SSPN-204ENST00000535504 C8orf58Q8NAV2 365 aa28.16■■■□□ 2.1
SSPN-204ENST00000535504 PDZRN3Q9UPQ7 1066 aa28.16■■■□□ 2.1
SSPN-204ENST00000535504 FANCIQ9NVI1 1328 aa28.16■■■□□ 2.1
SSPN-204ENST00000535504 PROSER3Q2NL68 480 aa28.15■■■□□ 2.1
SSPN-204ENST00000535504 TWISTNBQ3B726 338 aaPredicted RBP28.15■■■□□ 2.1
SSPN-204ENST00000535504 XAGE3Q8WTP9 111 aa28.15■■■□□ 2.1
SSPN-204ENST00000535504 NYXQ9GZU5 481 aa28.15■■■□□ 2.1
SSPN-204ENST00000535504 AFDNP55196 1824 aaKnown RBP28.14■■■□□ 2.1
SSPN-204ENST00000535504 PDE6BP35913 854 aa28.13■■■□□ 2.09
SSPN-204ENST00000535504 HLFQ16534 295 aa28.13■■■□□ 2.09
SSPN-204ENST00000535504 GIGYF2Q6Y7W6 1299 aaKnown RBP28.13■■■□□ 2.09
SSPN-204ENST00000535504 PXDNLA1KZ92 1463 aa28.13■■■□□ 2.09
SSPN-204ENST00000535504 A0A0G2JLW4 131 aa28.12■■■□□ 2.09
SSPN-204ENST00000535504 DPEP1P16444 411 aa28.12■■■□□ 2.09
SSPN-204ENST00000535504 ATP10DQ9P241 1426 aa28.11■■■□□ 2.09
SSPN-204ENST00000535504 H0YIN7 160 aa28.11■■■□□ 2.09
SSPN-204ENST00000535504 PIM2Q9P1W9 311 aa28.11■■■□□ 2.09
SSPN-204ENST00000535504 NRXN2Q9P2S2 1712 aa28.11■■■□□ 2.09
SSPN-204ENST00000535504 NUP98P52948 1817 aa28.11■■■□□ 2.09
SSPN-204ENST00000535504 FAM177BA6PVY3 158 aa28.1■■■□□ 2.09
SSPN-204ENST00000535504 DDX58O95786 925 aaKnown RBP28.1■■■□□ 2.09
SSPN-204ENST00000535504 PARP10Q53GL7 1025 aa28.1■■■□□ 2.09
SSPN-204ENST00000535504 PRR5LQ6MZQ0 368 aa28.1■■■□□ 2.09
SSPN-204ENST00000535504 PPP1R42Q7Z4L9 355 aa28.1■■■□□ 2.09
SSPN-204ENST00000535504 BRIP1Q9BX63 1249 aa28.1■■■□□ 2.09
SSPN-204ENST00000535504 ANKRD13DQ6ZTN6 518 aa28.09■■■□□ 2.09
SSPN-204ENST00000535504 LRP10Q7Z4F1 713 aa28.09■■■□□ 2.09
SSPN-204ENST00000535504 TSPYL6Q8N831 410 aa28.09■■■□□ 2.09
SSPN-204ENST00000535504 PLBD2Q8NHP8 589 aa28.09■■■□□ 2.09
SSPN-204ENST00000535504 WWC3Q9ULE0 1092 aa28.09■■■□□ 2.09
SSPN-204ENST00000535504 BCS1LQ9Y276 419 aa28.09■■■□□ 2.09
SSPN-204ENST00000535504 E9PSI1 815 aa28.08■■■□□ 2.09
SSPN-204ENST00000535504 GPTP24298 496 aa28.08■■■□□ 2.09
SSPN-204ENST00000535504 C2CD5Q86YS7 1000 aa28.08■■■□□ 2.09
SSPN-204ENST00000535504 N4BP2Q86UW6 1770 aaPredicted RBP28.08■■■□□ 2.09
SSPN-204ENST00000535504 EXOSC9Q06265 439 aaKnown RBP28.07■■■□□ 2.08
SSPN-204ENST00000535504 RIC3Q7Z5B4 369 aa28.07■■■□□ 2.08
SSPN-204ENST00000535504 DALRD3Q5D0E6 543 aaKnown RBP28.06■■■□□ 2.08
SSPN-204ENST00000535504 CHRNA5P30532 468 aa28.05■■■□□ 2.08
SSPN-204ENST00000535504 IBTKQ9P2D0 1353 aaPredicted RBP28.04■■■□□ 2.08
SSPN-204ENST00000535504 ZNF521Q96K83 1311 aa28.04■■■□□ 2.08
SSPN-204ENST00000535504 ZNF34Q8IZ26 560 aa28.04■■■□□ 2.08
SSPN-204ENST00000535504 YBX3P16989 372 aaKnown RBP eCLIP28.03■■■□□ 2.08
SSPN-204ENST00000535504 TCIRG1Q13488 830 aa28.03■■■□□ 2.08
SSPN-204ENST00000535504 CCDC24Q8N4L8 307 aa28.03■■■□□ 2.08
SSPN-204ENST00000535504 ZNF622Q969S3 477 aaKnown RBP eCLIP28.03■■■□□ 2.08
SSPN-204ENST00000535504 UTP14AQ9BVJ6 771 aaKnown RBP28.02■■■□□ 2.08
SSPN-204ENST00000535504 RNF123Q5XPI4 1314 aa28.01■■■□□ 2.07
SSPN-204ENST00000535504 SLC4A2P04920 1241 aa28■■■□□ 2.07
SSPN-204ENST00000535504 TTLL6Q8N841 843 aa28■■■□□ 2.07
SSPN-204ENST00000535504 PHAXQ9H814 394 aaKnown RBP28■■■□□ 2.07
SSPN-204ENST00000535504 SPINK5Q9NQ38 1064 aaPredicted RBP28■■■□□ 2.07
SSPN-204ENST00000535504 KIAA1551Q9HCM1 1747 aa28■■■□□ 2.07
SSPN-204ENST00000535504 YY1P25490 414 aa27.99■■■□□ 2.07
SSPN-204ENST00000535504 ANKRD36CQ5JPF3 1778 aa27.99■■■□□ 2.07
SSPN-204ENST00000535504 UBN2Q6ZU65 1347 aa27.98■■■□□ 2.07
SSPN-204ENST00000535504 TCERG1O14776 1098 aaKnown RBP27.98■■■□□ 2.07
SSPN-204ENST00000535504 VAMP4O75379 141 aa27.98■■■□□ 2.07
SSPN-204ENST00000535504 SUSD4Q5VX71 490 aa27.98■■■□□ 2.07
SSPN-204ENST00000535504 CNKSR1Q969H4 720 aa27.98■■■□□ 2.07
SSPN-204ENST00000535504 MASTLQ96GX5 879 aa27.98■■■□□ 2.07
SSPN-204ENST00000535504 CHD4Q14839 1912 aa27.97■■■□□ 2.07
SSPN-204ENST00000535504 KCNA3P22001 575 aa27.97■■■□□ 2.07
SSPN-204ENST00000535504 NEXNQ0ZGT2 675 aa27.97■■■□□ 2.07
SSPN-204ENST00000535504 NUTM1Q86Y26 1132 aa27.97■■■□□ 2.07
SSPN-204ENST00000535504 CACNA1FO60840 1977 aa27.97■■■□□ 2.07
SSPN-204ENST00000535504 TRMT112Q9UI30 125 aaKnown RBP27.96■■■□□ 2.07
SSPN-204ENST00000535504 HNRNPUQ00839 825 aaKnown RBP eCLIP27.95■■■□□ 2.06
SSPN-204ENST00000535504 SLFN5Q08AF3 891 aa27.95■■■□□ 2.06
SSPN-204ENST00000535504 ERFEQ4G0M1 354 aa27.95■■■□□ 2.06
SSPN-204ENST00000535504 STYK1Q6J9G0 422 aa27.95■■■□□ 2.06
SSPN-204ENST00000535504 NLRP10Q86W26 655 aa27.95■■■□□ 2.06
SSPN-204ENST00000535504 BRCA1P38398 1863 aaKnown RBP27.95■■■□□ 2.06
SSPN-204ENST00000535504 ANKRD31Q8N7Z5 1873 aa27.95■■■□□ 2.06
SSPN-204ENST00000535504 NTSR2O95665 410 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms