RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 POLA1P09884 1462 aaPredicted RBP14.64□□□□□ -0.07
SPG11-203ENST00000535302 NLRP5P59047 1200 aa14.64□□□□□ -0.07
SPG11-203ENST00000535302 TDRD12Q587J7 1177 aaKnown RBP14.64□□□□□ -0.07
SPG11-203ENST00000535302 CEP131Q9UPN4 1083 aa14.64□□□□□ -0.07
SPG11-203ENST00000535302 MAP3K12Q12852 859 aa14.64□□□□□ -0.07
SPG11-203ENST00000535302 INCENPQ9NQS7 918 aa14.64□□□□□ -0.07
SPG11-203ENST00000535302 RGS22Q8NE09 1264 aa14.63□□□□□ -0.07
SPG11-203ENST00000535302 SMTNL1A8MU46 457 aa14.63□□□□□ -0.07
SPG11-203ENST00000535302 SPA17Q15506 151 aa14.63□□□□□ -0.07
SPG11-203ENST00000535302 HSP90AA4PQ58FG1 418 aa14.63□□□□□ -0.07
SPG11-203ENST00000535302 CRACR2AQ9BSW2 395 aa14.63□□□□□ -0.07
SPG11-203ENST00000535302 POGZQ7Z3K3 1410 aa14.63□□□□□ -0.07
SPG11-203ENST00000535302 SSRP1Q08945 709 aaKnown RBP14.63□□□□□ -0.07
SPG11-203ENST00000535302 LUZP1Q86V48 1076 aa14.63□□□□□ -0.07
SPG11-203ENST00000535302 ZNF622Q969S3 477 aaKnown RBP eCLIP14.63□□□□□ -0.072e-6■■□□□ 11.9
SPG11-203ENST00000535302 KRT28Q7Z3Y7 464 aa14.63□□□□□ -0.07
SPG11-203ENST00000535302 NUP88Q99567 741 aaPredicted RBP14.63□□□□□ -0.07
SPG11-203ENST00000535302 PRKCSHP14314 528 aaPredicted RBP14.62□□□□□ -0.07
SPG11-203ENST00000535302 FERMT2Q96AC1 680 aa14.62□□□□□ -0.07
SPG11-203ENST00000535302 CC2D2AQ9P2K1 1620 aa14.62□□□□□ -0.07
SPG11-203ENST00000535302 RNF216Q9NWF9 866 aaPredicted RBP14.62□□□□□ -0.07
SPG11-203ENST00000535302 F8W031 263 aaPredicted RBP14.62□□□□□ -0.07
SPG11-203ENST00000535302 POTEJP0CG39 1038 aa14.62□□□□□ -0.07
SPG11-203ENST00000535302 TRIM27P14373 513 aa14.62□□□□□ -0.07
SPG11-203ENST00000535302 CTCFLQ8NI51 663 aaPredicted RBP14.62□□□□□ -0.07
SPG11-203ENST00000535302 ZNF526Q8TF50 670 aaPredicted RBP14.62□□□□□ -0.07
SPG11-203ENST00000535302 PAIP2Q9BPZ3 127 aaKnown RBP14.62□□□□□ -0.07
SPG11-203ENST00000535302 KIF4BQ2VIQ3 1234 aa14.61□□□□□ -0.07
SPG11-203ENST00000535302 EFCAB5A4FU69 1503 aa14.61□□□□□ -0.07
SPG11-203ENST00000535302 WASLO00401 505 aaPredicted RBP14.61□□□□□ -0.07
SPG11-203ENST00000535302 RBM27Q9P2N5 1060 aaKnown RBP14.61□□□□□ -0.07
SPG11-203ENST00000535302 FLIIQ13045 1269 aa14.61□□□□□ -0.07
SPG11-203ENST00000535302 DPH6Q7L8W6 267 aa14.61□□□□□ -0.07
SPG11-203ENST00000535302 SAMM50Q9Y512 469 aa14.61□□□□□ -0.07
SPG11-203ENST00000535302 GJB2P29033 226 aa14.61□□□□□ -0.07
SPG11-203ENST00000535302 HLTFQ14527 1009 aaKnown RBP eCLIP14.61□□□□□ -0.07
SPG11-203ENST00000535302 LRRC2Q9BYS8 371 aa14.61□□□□□ -0.07
SPG11-203ENST00000535302 EPRSP07814 1512 aaKnown RBP14.61□□□□□ -0.07
SPG11-203ENST00000535302 TCERG1LQ5VWI1 586 aa14.61□□□□□ -0.07
SPG11-203ENST00000535302 CAMSAP2Q08AD1 1489 aa14.61□□□□□ -0.07
SPG11-203ENST00000535302 EXOC5O00471 708 aa14.61□□□□□ -0.07
SPG11-203ENST00000535302 UBE3BQ7Z3V4 1068 aa14.61□□□□□ -0.07
SPG11-203ENST00000535302 UBXN4Q92575 508 aa14.6□□□□□ -0.07
SPG11-203ENST00000535302 MBIPQ9NS73 344 aa14.6□□□□□ -0.07
SPG11-203ENST00000535302 TNIP1Q15025 636 aa14.6□□□□□ -0.07
SPG11-203ENST00000535302 PPP4R3AQ6IN85 833 aa14.6□□□□□ -0.07
SPG11-203ENST00000535302 PDCL2Q8N4E4 241 aa14.6□□□□□ -0.07
SPG11-203ENST00000535302 CD109Q6YHK3 1445 aa14.6□□□□□ -0.07
SPG11-203ENST00000535302 IQCEQ6IPM2 695 aa14.6□□□□□ -0.07
SPG11-203ENST00000535302 MICU3Q86XE3 530 aa14.6□□□□□ -0.07
SPG11-203ENST00000535302 PLB1Q6P1J6 1458 aa14.59□□□□□ -0.07
SPG11-203ENST00000535302 NOP2P46087 812 aaKnown RBP14.59□□□□□ -0.07
SPG11-203ENST00000535302 LMAN1P49257 510 aa14.59□□□□□ -0.07
SPG11-203ENST00000535302 MRPS9P82933 396 aaKnown RBP14.59□□□□□ -0.07
SPG11-203ENST00000535302 SPECC1Q5M775 1068 aa14.59□□□□□ -0.07
SPG11-203ENST00000535302 STAMBPO95630 424 aa14.59□□□□□ -0.07
SPG11-203ENST00000535302 LDHAL6AQ6ZMR3 332 aa14.59□□□□□ -0.07
SPG11-203ENST00000535302 AMOTQ4VCS5 1084 aa14.59□□□□□ -0.07
SPG11-203ENST00000535302 MTERF4Q7Z6M4 381 aaKnown RBP14.59□□□□□ -0.07
SPG11-203ENST00000535302 PI4KAP2A4QPH2 592 aa14.59□□□□□ -0.07
SPG11-203ENST00000535302 TRIM21P19474 475 aaKnown RBP14.59□□□□□ -0.07
SPG11-203ENST00000535302 SLC39A6Q13433 755 aa14.59□□□□□ -0.07
SPG11-203ENST00000535302 IDI1Q13907 227 aa14.59□□□□□ -0.07
SPG11-203ENST00000535302 PI4KAP1Q8N8J0 262 aa14.59□□□□□ -0.07
SPG11-203ENST00000535302 CNNM3Q8NE01 707 aa14.58□□□□□ -0.07
SPG11-203ENST00000535302 NKTRP30414 1462 aaKnown RBP14.58□□□□□ -0.07
SPG11-203ENST00000535302 KIF20AO95235 890 aa14.58□□□□□ -0.07
SPG11-203ENST00000535302 IQCA1Q86XH1 822 aa14.58□□□□□ -0.07
SPG11-203ENST00000535302 ANKRD24Q8TF21 1146 aa14.58□□□□□ -0.07
SPG11-203ENST00000535302 CLIP2Q9UDT6 1046 aa14.58□□□□□ -0.07
SPG11-203ENST00000535302 PRC1O43663 620 aa14.58□□□□□ -0.08
SPG11-203ENST00000535302 CUL5Q93034 780 aa14.58□□□□□ -0.08
SPG11-203ENST00000535302 VTI1AQ96AJ9 217 aa14.58□□□□□ -0.08
SPG11-203ENST00000535302 TCEANC2Q96MN5 208 aa14.58□□□□□ -0.08
SPG11-203ENST00000535302 NOS1P29475 1434 aa14.58□□□□□ -0.08
SPG11-203ENST00000535302 FSIP1Q8NA03 581 aa14.58□□□□□ -0.08
SPG11-203ENST00000535302 TSG101Q99816 390 aa14.58□□□□□ -0.08
SPG11-203ENST00000535302 USP25Q9UHP3 1055 aa14.58□□□□□ -0.08
SPG11-203ENST00000535302 PCF11O94913 1555 aaKnown RBP14.58□□□□□ -0.08
SPG11-203ENST00000535302 CCDC194A0A1B0GVG4 234 aa14.58□□□□□ -0.08
SPG11-203ENST00000535302 IGHDP01880 384 aa14.58□□□□□ -0.08
SPG11-203ENST00000535302 TMEM67Q5HYA8 995 aa14.58□□□□□ -0.08
SPG11-203ENST00000535302 TMCO4Q5TGY1 634 aa14.58□□□□□ -0.08
SPG11-203ENST00000535302 ZNF287Q9HBT7 754 aa14.58□□□□□ -0.08
SPG11-203ENST00000535302 HYPKQ9NX55 129 aa14.58□□□□□ -0.08
SPG11-203ENST00000535302 MYO1BO43795 1136 aa14.58□□□□□ -0.08
SPG11-203ENST00000535302 GRIPAP1Q4V328 841 aa14.58□□□□□ -0.08
SPG11-203ENST00000535302 C16orf45Q96MC5 204 aaPredicted RBP14.58□□□□□ -0.08
SPG11-203ENST00000535302 DDX23Q9BUQ8 820 aaKnown RBP14.58□□□□□ -0.08
SPG11-203ENST00000535302 PPP1R12BO60237 982 aaPredicted RBP14.57□□□□□ -0.08
SPG11-203ENST00000535302 GJC1P36383 396 aa14.57□□□□□ -0.08
SPG11-203ENST00000535302 HOOK3Q86VS8 718 aa14.57□□□□□ -0.08
SPG11-203ENST00000535302 DDX46Q7L014 1031 aaKnown RBP14.57□□□□□ -0.08
SPG11-203ENST00000535302 PPP1R42Q7Z4L9 355 aa14.57□□□□□ -0.08
SPG11-203ENST00000535302 DBF4Q9UBU7 674 aaPredicted RBP14.57□□□□□ -0.08
SPG11-203ENST00000535302 ALDH1L2Q3SY69 923 aa14.57□□□□□ -0.08
SPG11-203ENST00000535302 AKNAD1Q5T1N1 836 aa14.57□□□□□ -0.08
SPG11-203ENST00000535302 NECAB1Q8N987 351 aa14.57□□□□□ -0.08
SPG11-203ENST00000535302 SHTN1A0MZ66 631 aa14.57□□□□□ -0.08
SPG11-203ENST00000535302 FKBP15Q5T1M5 1219 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms