RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 TSPY2A6NKD2 308 aa21.01■□□□□ 0.95
SFSWAP-203ENST00000535236 CTAGE5O15320 804 aa21.01■□□□□ 0.95
SFSWAP-203ENST00000535236 FLIIQ13045 1269 aa21.01■□□□□ 0.95
SFSWAP-203ENST00000535236 TOPBP1Q92547 1522 aa21■□□□□ 0.95
SFSWAP-203ENST00000535236 MAP2K1Q02750 393 aaPredicted RBP21■□□□□ 0.95
SFSWAP-203ENST00000535236 PTPN14Q15678 1187 aa21■□□□□ 0.95
SFSWAP-203ENST00000535236 HOOK3Q86VS8 718 aa21■□□□□ 0.95
SFSWAP-203ENST00000535236 VAT1LQ9HCJ6 419 aa21■□□□□ 0.95
SFSWAP-203ENST00000535236 RFC4P35249 363 aa21■□□□□ 0.95
SFSWAP-203ENST00000535236 KIF4BQ2VIQ3 1234 aa21■□□□□ 0.95
SFSWAP-203ENST00000535236 YEATS4O95619 227 aa21■□□□□ 0.95
SFSWAP-203ENST00000535236 TMEM67Q5HYA8 995 aa21■□□□□ 0.95
SFSWAP-203ENST00000535236 CTNNA2P26232 953 aa20.99■□□□□ 0.95
SFSWAP-203ENST00000535236 STXBP4Q6ZWJ1 553 aa20.99■□□□□ 0.95
SFSWAP-203ENST00000535236 INCENPQ9NQS7 918 aa20.99■□□□□ 0.95
SFSWAP-203ENST00000535236 TTC21BQ7Z4L5 1316 aa20.99■□□□□ 0.95
SFSWAP-203ENST00000535236 MTIF2P46199 727 aaKnown RBP20.99■□□□□ 0.95
SFSWAP-203ENST00000535236 DNA2P51530 1060 aa20.99■□□□□ 0.95
SFSWAP-203ENST00000535236 TRMT1LQ7Z2T5 733 aaKnown RBP20.99■□□□□ 0.95
SFSWAP-203ENST00000535236 DRC1Q96MC2 740 aa20.99■□□□□ 0.95
SFSWAP-203ENST00000535236 ECHDC1Q9NTX5 307 aa20.99■□□□□ 0.95
SFSWAP-203ENST00000535236 NAIPQ13075 1403 aa20.99■□□□□ 0.95
SFSWAP-203ENST00000535236 IARSP41252 1262 aaKnown RBP20.99■□□□□ 0.95
SFSWAP-203ENST00000535236 CCDC184Q52MB2 194 aa20.99■□□□□ 0.95
SFSWAP-203ENST00000535236 TMCO3Q6UWJ1 677 aa20.99■□□□□ 0.95
SFSWAP-203ENST00000535236 GOPCQ9HD26 462 aa20.99■□□□□ 0.95
SFSWAP-203ENST00000535236 MYO1BO43795 1136 aa20.98■□□□□ 0.95
SFSWAP-203ENST00000535236 ST5P78524 1137 aa20.98■□□□□ 0.95
SFSWAP-203ENST00000535236 MAP9Q49MG5 647 aa20.98■□□□□ 0.95
SFSWAP-203ENST00000535236 CCDC40Q4G0X9 1142 aa20.98■□□□□ 0.95
SFSWAP-203ENST00000535236 TTC21AQ8NDW8 1320 aa20.98■□□□□ 0.95
SFSWAP-203ENST00000535236 PRKCSHP14314 528 aaPredicted RBP20.98■□□□□ 0.95
SFSWAP-203ENST00000535236 TCERG1LQ5VWI1 586 aa20.98■□□□□ 0.95
SFSWAP-203ENST00000535236 SAMM50Q9Y512 469 aa20.98■□□□□ 0.95
SFSWAP-203ENST00000535236 IDEP14735 1019 aa20.98■□□□□ 0.95
SFSWAP-203ENST00000535236 IFFO1Q0D2I5 559 aa20.98■□□□□ 0.95
SFSWAP-203ENST00000535236 MPHOSPH6Q99547 160 aaKnown RBP20.98■□□□□ 0.95
SFSWAP-203ENST00000535236 ARHGEF11O15085 1522 aa20.98■□□□□ 0.95
SFSWAP-203ENST00000535236 PAFAH1B1P43034 410 aa20.97■□□□□ 0.95
SFSWAP-203ENST00000535236 ATP5J2-PTCD1G3V325 749 aa20.97■□□□□ 0.95
SFSWAP-203ENST00000535236 MFSD6Q6ZSS7 791 aa20.97■□□□□ 0.95
SFSWAP-203ENST00000535236 FSIP1Q8NA03 581 aa20.97■□□□□ 0.95
SFSWAP-203ENST00000535236 SNRKQ9NRH2 765 aa20.97■□□□□ 0.95
SFSWAP-203ENST00000535236 TIAM1Q13009 1591 aa20.97■□□□□ 0.95
SFSWAP-203ENST00000535236 CPLX3Q8WVH0 158 aa20.97■□□□□ 0.95
SFSWAP-203ENST00000535236 USP16Q9Y5T5 823 aa20.97■□□□□ 0.95
SFSWAP-203ENST00000535236 DMRT2Q9Y5R5 561 aa20.97■□□□□ 0.95
SFSWAP-203ENST00000535236 CCDC144CPQ8IYA2 1237 aa20.96■□□□□ 0.95
SFSWAP-203ENST00000535236 NKTRP30414 1462 aaKnown RBP20.96■□□□□ 0.95
SFSWAP-203ENST00000535236 MCM3P25205 808 aa20.96■□□□□ 0.95
SFSWAP-203ENST00000535236 USP8P40818 1118 aa20.96■□□□□ 0.95
SFSWAP-203ENST00000535236 GSTO1P78417 241 aa20.96■□□□□ 0.95
SFSWAP-203ENST00000535236 CDK13Q14004 1512 aaKnown RBP20.96■□□□□ 0.95
SFSWAP-203ENST00000535236 SYCP3Q8IZU3 236 aa20.96■□□□□ 0.95
SFSWAP-203ENST00000535236 CLIP2Q9UDT6 1046 aa20.96■□□□□ 0.95
SFSWAP-203ENST00000535236 SYNJ1O43426 1573 aa20.96■□□□□ 0.95
SFSWAP-203ENST00000535236 TNNT1P13805 278 aa20.96■□□□□ 0.95
SFSWAP-203ENST00000535236 URI1O94763 535 aaPredicted RBP20.95■□□□□ 0.94
SFSWAP-203ENST00000535236 STAMBPO95630 424 aa20.95■□□□□ 0.94
SFSWAP-203ENST00000535236 UBE3BQ7Z3V4 1068 aa20.95■□□□□ 0.94
SFSWAP-203ENST00000535236 PYM1Q9BRP8 204 aaKnown RBP20.95■□□□□ 0.94
SFSWAP-203ENST00000535236 ADGRL1O94910 1474 aa20.95■□□□□ 0.94
SFSWAP-203ENST00000535236 ESPNB1AK53 854 aa20.94■□□□□ 0.94
SFSWAP-203ENST00000535236 GCOM1H8Y6P7 765 aaPredicted RBP20.94■□□□□ 0.94
SFSWAP-203ENST00000535236 MYZAPP0CAP1 466 aa20.94■□□□□ 0.94
SFSWAP-203ENST00000535236 CRNKL1Q9BZJ0 848 aaKnown RBP20.94■□□□□ 0.94
SFSWAP-203ENST00000535236 CEBPAP49715 358 aaPredicted RBP20.94■□□□□ 0.94
SFSWAP-203ENST00000535236 SLC4A8Q2Y0W8 1093 aa20.94■□□□□ 0.94
SFSWAP-203ENST00000535236 FBXO31Q5XUX0 539 aaPredicted RBP20.94■□□□□ 0.94
SFSWAP-203ENST00000535236 NBPF6Q5VWK0 638 aa20.94■□□□□ 0.94
SFSWAP-203ENST00000535236 NBPF5PQ86XG9 351 aaPredicted RBP20.94■□□□□ 0.94
SFSWAP-203ENST00000535236 KIF18AQ8NI77 898 aa20.94■□□□□ 0.94
SFSWAP-203ENST00000535236 NBPF4Q96M43 638 aa20.94■□□□□ 0.94
SFSWAP-203ENST00000535236 COMMD10Q9Y6G5 202 aa20.94■□□□□ 0.94
SFSWAP-203ENST00000535236 UQCRFS1P1P0C7P4 283 aa20.94■□□□□ 0.94
SFSWAP-203ENST00000535236 METAP2P50579 478 aaKnown RBP eCLIP20.94■□□□□ 0.94
SFSWAP-203ENST00000535236 FAM114A1Q8IWE2 563 aa20.94■□□□□ 0.94
SFSWAP-203ENST00000535236 NCOA7Q8NI08 942 aa20.94■□□□□ 0.94
SFSWAP-203ENST00000535236 FAM135AQ9P2D6 1515 aa20.93■□□□□ 0.94
SFSWAP-203ENST00000535236 SHTN1A0MZ66 631 aa20.93■□□□□ 0.94
SFSWAP-203ENST00000535236 UBA7P41226 1012 aa20.93■□□□□ 0.94
SFSWAP-203ENST00000535236 MAGI1Q96QZ7 1491 aaPredicted RBP20.93■□□□□ 0.94
SFSWAP-203ENST00000535236 CCDC152Q4G0S7 254 aa20.93■□□□□ 0.94
SFSWAP-203ENST00000535236 CKAP2LQ8IYA6 745 aa20.93■□□□□ 0.94
SFSWAP-203ENST00000535236 ANKRD24Q8TF21 1146 aa20.93■□□□□ 0.94
SFSWAP-203ENST00000535236 PIK3R4Q99570 1358 aa20.93■□□□□ 0.94
SFSWAP-203ENST00000535236 PRC1O43663 620 aa20.93■□□□□ 0.94
SFSWAP-203ENST00000535236 SNRPA1P09661 255 aaKnown RBP20.93■□□□□ 0.94
SFSWAP-203ENST00000535236 HAND2P61296 217 aa20.93■□□□□ 0.94
SFSWAP-203ENST00000535236 MICU3Q86XE3 530 aa20.93■□□□□ 0.94
SFSWAP-203ENST00000535236 ALS2CR12Q96Q35 445 aa20.93■□□□□ 0.94
SFSWAP-203ENST00000535236 DDX19AQ9NUU7 478 aaKnown RBP20.93■□□□□ 0.94
SFSWAP-203ENST00000535236 LRRC27Q9C0I9 530 aa20.93■□□□□ 0.94
SFSWAP-203ENST00000535236 TAOK3Q9H2K8 898 aa20.93■□□□□ 0.94
SFSWAP-203ENST00000535236 GJB2P29033 226 aa20.92■□□□□ 0.94
SFSWAP-203ENST00000535236 GOLGA6L10A0A0M3HER8 536 aa20.92■□□□□ 0.94
SFSWAP-203ENST00000535236 TMCO5BA8MYB1 307 aa20.91■□□□□ 0.94
SFSWAP-203ENST00000535236 ORC3Q9UBD5 711 aaPredicted RBP20.91■□□□□ 0.94
SFSWAP-203ENST00000535236 KIAA0586Q9BVV6 1533 aa20.91■□□□□ 0.94
SFSWAP-203ENST00000535236 PDCL2Q8N4E4 241 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms