RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 SRGNP10124 158 aa24.82■■□□□ 1.56
NDUFS3-213ENST00000534716 RASSF7Q02833 373 aa24.82■■□□□ 1.56
NDUFS3-213ENST00000534716 STYK1Q6J9G0 422 aa24.82■■□□□ 1.56
NDUFS3-213ENST00000534716 CCDC24Q8N4L8 307 aa24.82■■□□□ 1.56
NDUFS3-213ENST00000534716 NMRK2Q9NPI5 230 aa24.82■■□□□ 1.56
NDUFS3-213ENST00000534716 KDM2BQ8NHM5 1336 aa24.82■■□□□ 1.56
NDUFS3-213ENST00000534716 PRELPP51888 382 aa24.81■■□□□ 1.56
NDUFS3-213ENST00000534716 RIPK4P57078 832 aa24.81■■□□□ 1.56
NDUFS3-213ENST00000534716 NBPF5PQ86XG9 351 aaPredicted RBP24.81■■□□□ 1.56
NDUFS3-213ENST00000534716 KLRG2A4D1S0 409 aaPredicted RBP24.8■■□□□ 1.56
NDUFS3-213ENST00000534716 ERVV-1B6SEH8 477 aa24.8■■□□□ 1.56
NDUFS3-213ENST00000534716 NFKBIEO00221 500 aa24.8■■□□□ 1.56
NDUFS3-213ENST00000534716 NPHP1O15259 732 aa24.8■■□□□ 1.56
NDUFS3-213ENST00000534716 TMPOP42166 694 aaKnown RBP24.8■■□□□ 1.56
NDUFS3-213ENST00000534716 TPTE2Q6XPS3 522 aa24.8■■□□□ 1.56
NDUFS3-213ENST00000534716 CNKSR1Q969H4 720 aa24.8■■□□□ 1.56
NDUFS3-213ENST00000534716 SBF1O95248 1867 aa24.8■■□□□ 1.56
NDUFS3-213ENST00000534716 COL11A2P13942 1736 aaPredicted RBP24.8■■□□□ 1.56
NDUFS3-213ENST00000534716 LMOD3Q0VAK6 560 aa24.79■■□□□ 1.56
NDUFS3-213ENST00000534716 HLFQ16534 295 aa24.79■■□□□ 1.56
NDUFS3-213ENST00000534716 MASTLQ96GX5 879 aa24.79■■□□□ 1.56
NDUFS3-213ENST00000534716 NIP7Q9Y221 180 aaKnown RBP eCLIP24.79■■□□□ 1.56
NDUFS3-213ENST00000534716 ERBB4Q15303 1308 aa24.78■■□□□ 1.56
NDUFS3-213ENST00000534716 TSPYL4Q9UJ04 414 aa24.77■■□□□ 1.56
NDUFS3-213ENST00000534716 LTBP3Q9NS15 1303 aa24.77■■□□□ 1.56
NDUFS3-213ENST00000534716 C21orf2O43822 256 aa24.76■■□□□ 1.55
NDUFS3-213ENST00000534716 MAP3K15Q6ZN16 1313 aa24.76■■□□□ 1.55
NDUFS3-213ENST00000534716 PRPF40BQ6NWY9 871 aaKnown RBP24.75■■□□□ 1.55
NDUFS3-213ENST00000534716 RBM46Q8TBY0 533 aaKnown RBP24.75■■□□□ 1.55
NDUFS3-213ENST00000534716 NPR1P16066 1061 aa24.74■■□□□ 1.55
NDUFS3-213ENST00000534716 SOGA3Q5TF21 947 aa24.74■■□□□ 1.55
NDUFS3-213ENST00000534716 RUNDC1Q96C34 613 aa24.74■■□□□ 1.55
NDUFS3-213ENST00000534716 RRP7AQ9Y3A4 280 aaKnown RBP24.74■■□□□ 1.55
NDUFS3-213ENST00000534716 GLTPD2A6NH11 291 aa24.73■■□□□ 1.55
NDUFS3-213ENST00000534716 KIF6Q6ZMV9 814 aa24.73■■□□□ 1.55
NDUFS3-213ENST00000534716 C7orf43Q8WVR3 580 aa24.73■■□□□ 1.55
NDUFS3-213ENST00000534716 PRKRIP1Q9H875 184 aaPredicted RBP24.73■■□□□ 1.55
NDUFS3-213ENST00000534716 TTLL7Q6ZT98 887 aa24.72■■□□□ 1.55
NDUFS3-213ENST00000534716 LRP10Q7Z4F1 713 aa24.72■■□□□ 1.55
NDUFS3-213ENST00000534716 NGEFQ8N5V2 710 aa24.72■■□□□ 1.55
NDUFS3-213ENST00000534716 NYXQ9GZU5 481 aa24.72■■□□□ 1.55
NDUFS3-213ENST00000534716 RRAGCQ9HB90 399 aa24.72■■□□□ 1.55
NDUFS3-213ENST00000534716 MYL6BP14649 208 aa24.71■■□□□ 1.55
NDUFS3-213ENST00000534716 WDR43Q15061 677 aaKnown RBP eCLIP24.71■■□□□ 1.55
NDUFS3-213ENST00000534716 C16orf71Q8IYS4 520 aaPredicted RBP24.71■■□□□ 1.55
NDUFS3-213ENST00000534716 TNRC6CQ9HCJ0 1690 aaKnown RBP24.71■■□□□ 1.55
NDUFS3-213ENST00000534716 FER1L6Q2WGJ9 1857 aa24.7■■□□□ 1.55
NDUFS3-213ENST00000534716 ARFGEF2Q9Y6D5 1785 aa24.7■■□□□ 1.55
NDUFS3-213ENST00000534716 IBTKQ9P2D0 1353 aaPredicted RBP24.7■■□□□ 1.55
NDUFS3-213ENST00000534716 FSTL1Q12841 308 aa24.7■■□□□ 1.54
NDUFS3-213ENST00000534716 PDIA6Q15084 440 aa24.7■■□□□ 1.54
NDUFS3-213ENST00000534716 TAOK3Q9H2K8 898 aa24.7■■□□□ 1.54
NDUFS3-213ENST00000534716 ZNF219Q9P2Y4 722 aaPredicted RBP24.7■■□□□ 1.54
NDUFS3-213ENST00000534716 ADAMTS8Q9UP79 889 aa24.7■■□□□ 1.54
NDUFS3-213ENST00000534716 CHL1O00533 1208 aa24.69■■□□□ 1.54
NDUFS3-213ENST00000534716 APLP1P51693 650 aa24.69■■□□□ 1.54
NDUFS3-213ENST00000534716 CCDC146Q8IYE0 955 aa24.69■■□□□ 1.54
NDUFS3-213ENST00000534716 TRIM35Q9UPQ4 493 aa24.69■■□□□ 1.54
NDUFS3-213ENST00000534716 SLX4Q8IY92 1834 aa24.68■■□□□ 1.54
NDUFS3-213ENST00000534716 CRY2Q49AN0 593 aa24.68■■□□□ 1.54
NDUFS3-213ENST00000534716 GIGYF2Q6Y7W6 1299 aaKnown RBP24.68■■□□□ 1.54
NDUFS3-213ENST00000534716 ZNF34Q8IZ26 560 aa24.68■■□□□ 1.54
NDUFS3-213ENST00000534716 RIC1Q4ADV7 1423 aa24.68■■□□□ 1.54
NDUFS3-213ENST00000534716 GTF2E1P29083 439 aaPredicted RBP24.67■■□□□ 1.54
NDUFS3-213ENST00000534716 TIAM2Q8IVF5 1701 aa24.66■■□□□ 1.54
NDUFS3-213ENST00000534716 UBN2Q6ZU65 1347 aa24.66■■□□□ 1.54
NDUFS3-213ENST00000534716 FAM177BA6PVY3 158 aa24.66■■□□□ 1.54
NDUFS3-213ENST00000534716 ALDH1B1P30837 517 aa24.66■■□□□ 1.54
NDUFS3-213ENST00000534716 ERFEQ4G0M1 354 aa24.66■■□□□ 1.54
NDUFS3-213ENST00000534716 ZBTB3Q9H5J0 574 aa24.66■■□□□ 1.54
NDUFS3-213ENST00000534716 VEGFAP15692 232 aaPredicted RBP24.65■■□□□ 1.54
NDUFS3-213ENST00000534716 EIF2S2P20042 333 aaKnown RBP24.65■■□□□ 1.54
NDUFS3-213ENST00000534716 NEUROD2Q15784 382 aa24.65■■□□□ 1.54
NDUFS3-213ENST00000534716 CCDC93Q567U6 631 aa24.65■■□□□ 1.54
NDUFS3-213ENST00000534716 DPY19L2Q6NUT2 758 aa24.65■■□□□ 1.54
NDUFS3-213ENST00000534716 NUP98P52948 1817 aa24.64■■□□□ 1.54
NDUFS3-213ENST00000534716 ABCC12Q96J65 1359 aa24.64■■□□□ 1.53
NDUFS3-213ENST00000534716 PARP10Q53GL7 1025 aa24.63■■□□□ 1.53
NDUFS3-213ENST00000534716 SUSD4Q5VX71 490 aa24.63■■□□□ 1.53
NDUFS3-213ENST00000534716 NUTM1Q86Y26 1132 aa24.63■■□□□ 1.53
NDUFS3-213ENST00000534716 NTSR2O95665 410 aa24.62■■□□□ 1.53
NDUFS3-213ENST00000534716 GPTP24298 496 aa24.62■■□□□ 1.53
NDUFS3-213ENST00000534716 HOXA10P31260 410 aaPredicted RBP24.62■■□□□ 1.53
NDUFS3-213ENST00000534716 PROSER3Q2NL68 480 aa24.62■■□□□ 1.53
NDUFS3-213ENST00000534716 POTECB2RU33 542 aa24.61■■□□□ 1.53
NDUFS3-213ENST00000534716 FKBP4Q02790 459 aaKnown RBP eCLIP24.61■■□□□ 1.53
NDUFS3-213ENST00000534716 PPP1R42Q7Z4L9 355 aa24.61■■□□□ 1.53
NDUFS3-213ENST00000534716 RTKN2Q8IZC4 609 aa24.61■■□□□ 1.53
NDUFS3-213ENST00000534716 SMC1BQ8NDV3 1235 aa24.61■■□□□ 1.53
NDUFS3-213ENST00000534716 DICER1Q9UPY3 1922 aaKnown RBP24.61■■□□□ 1.53
NDUFS3-213ENST00000534716 WDR90Q96KV7 1748 aa24.61■■□□□ 1.53
NDUFS3-213ENST00000534716 CCDC88AQ3V6T2 1871 aa24.6■■□□□ 1.53
NDUFS3-213ENST00000534716 HOXB7P09629 217 aa24.6■■□□□ 1.53
NDUFS3-213ENST00000534716 DNAJC5GQ8N7S2 189 aa24.6■■□□□ 1.53
NDUFS3-213ENST00000534716 CFAP44Q96MT7 982 aa24.59■■□□□ 1.53
NDUFS3-213ENST00000534716 DDX21Q9NR30 783 aaKnown RBP eCLIP24.59■■□□□ 1.53
NDUFS3-213ENST00000534716 SNED1Q8TER0 1413 aa24.59■■□□□ 1.53
NDUFS3-213ENST00000534716 COPS6Q7L5N1 327 aa24.58■■□□□ 1.53
NDUFS3-213ENST00000534716 RNF123Q5XPI4 1314 aa24.58■■□□□ 1.52
NDUFS3-213ENST00000534716 CACNA1SQ13698 1873 aa24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms