RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 NFIXQ14938 502 aa18.16■□□□□ 0.5
VPS11-205ENST00000534551 TBC1D9BQ66K14 1250 aa18.16■□□□□ 0.5
VPS11-205ENST00000534551 GOLGB1Q14789 3259 aaKnown RBP18.16■□□□□ 0.5
VPS11-205ENST00000534551 BRCA1P38398 1863 aaKnown RBP18.16■□□□□ 0.5
VPS11-205ENST00000534551 C10orf71Q711Q0 1435 aa18.15■□□□□ 0.5
VPS11-205ENST00000534551 CACNA1FO60840 1977 aa18.15■□□□□ 0.5
VPS11-205ENST00000534551 HNRNPUQ00839 825 aaKnown RBP eCLIP18.15■□□□□ 0.5
VPS11-205ENST00000534551 HLFQ16534 295 aa18.15■□□□□ 0.5
VPS11-205ENST00000534551 ZBTB3Q9H5J0 574 aa18.15■□□□□ 0.5
VPS11-205ENST00000534551 TNRC6CQ9HCJ0 1690 aaKnown RBP18.15■□□□□ 0.5
VPS11-205ENST00000534551 CARMIL3Q8ND23 1372 aa18.15■□□□□ 0.5
VPS11-205ENST00000534551 CACNA1SQ13698 1873 aa18.14■□□□□ 0.49
VPS11-205ENST00000534551 TWISTNBQ3B726 338 aaPredicted RBP18.14■□□□□ 0.49
VPS11-205ENST00000534551 NPM2Q86SE8 214 aaKnown RBP18.14■□□□□ 0.49
VPS11-205ENST00000534551 NLGN1Q8N2Q7 840 aa18.14■□□□□ 0.49
VPS11-205ENST00000534551 NLGN2Q8NFZ4 835 aa18.14■□□□□ 0.49
VPS11-205ENST00000534551 DLEC1Q9Y238 1755 aa18.13■□□□□ 0.49
VPS11-205ENST00000534551 POLRMTO00411 1230 aaKnown RBP18.13■□□□□ 0.49
VPS11-205ENST00000534551 GOLGA2Q08379 1002 aa18.13■□□□□ 0.49
VPS11-205ENST00000534551 AIMP1Q12904 312 aaKnown RBP18.13■□□□□ 0.49
VPS11-205ENST00000534551 XAGE3Q8WTP9 111 aa18.13■□□□□ 0.49
VPS11-205ENST00000534551 DDX21Q9NR30 783 aaKnown RBP eCLIP18.13■□□□□ 0.49
VPS11-205ENST00000534551 MAP3K15Q6ZN16 1313 aa18.13■□□□□ 0.49
VPS11-205ENST00000534551 TM4SF1P30408 202 aa18.12■□□□□ 0.49
VPS11-205ENST00000534551 MYH16Q9H6N6 1097 aa18.12■□□□□ 0.49
VPS11-205ENST00000534551 SLFN5Q08AF3 891 aa18.11■□□□□ 0.49
VPS11-205ENST00000534551 KIF6Q6ZMV9 814 aa18.11■□□□□ 0.49
VPS11-205ENST00000534551 COPS6Q7L5N1 327 aa18.11■□□□□ 0.49
VPS11-205ENST00000534551 PARP3Q9Y6F1 533 aa18.11■□□□□ 0.49
VPS11-205ENST00000534551 PXDNLA1KZ92 1463 aa18.1■□□□□ 0.49
VPS11-205ENST00000534551 CCDC24Q8N4L8 307 aa18.1■□□□□ 0.49
VPS11-205ENST00000534551 ZNF428Q96B54 188 aa18.1■□□□□ 0.49
VPS11-205ENST00000534551 SYT17Q9BSW7 474 aa18.1■□□□□ 0.49
VPS11-205ENST00000534551 PHAXQ9H814 394 aaKnown RBP18.1■□□□□ 0.49
VPS11-205ENST00000534551 DBF4Q9UBU7 674 aaPredicted RBP18.1■□□□□ 0.49
VPS11-205ENST00000534551 LAMB2P55268 1798 aa18.09■□□□□ 0.49
VPS11-205ENST00000534551 ATP10DQ9P241 1426 aa18.09■□□□□ 0.49
VPS11-205ENST00000534551 UBN2Q6ZU65 1347 aa18.09■□□□□ 0.49
VPS11-205ENST00000534551 E9PSI1 815 aa18.09■□□□□ 0.49
VPS11-205ENST00000534551 GPTP24298 496 aa18.09■□□□□ 0.49
VPS11-205ENST00000534551 WWC3Q9ULE0 1092 aa18.09■□□□□ 0.49
VPS11-205ENST00000534551 FAM177BA6PVY3 158 aa18.08■□□□□ 0.48
VPS11-205ENST00000534551 VAMP4O75379 141 aa18.08■□□□□ 0.48
VPS11-205ENST00000534551 SERPINB2P05120 415 aa18.07■□□□□ 0.48
VPS11-205ENST00000534551 CCDC30Q5VVM6 783 aa18.07■□□□□ 0.48
VPS11-205ENST00000534551 G2E3Q7L622 706 aa18.07■□□□□ 0.48
VPS11-205ENST00000534551 NIP7Q9Y221 180 aaKnown RBP eCLIP18.07■□□□□ 0.48
VPS11-205ENST00000534551 ZNF652Q9Y2D9 606 aa18.07■□□□□ 0.48
VPS11-205ENST00000534551 DDX60Q8IY21 1712 aaKnown RBP18.06■□□□□ 0.48
VPS11-205ENST00000534551 ABCC12Q96J65 1359 aa18.05■□□□□ 0.48
VPS11-205ENST00000534551 ERVV-1B6SEH8 477 aa18.05■□□□□ 0.48
VPS11-205ENST00000534551 TRMT2AQ8IZ69 625 aaKnown RBP18.05■□□□□ 0.48
VPS11-205ENST00000534551 HYPKQ9NX55 129 aa18.05■□□□□ 0.48
VPS11-205ENST00000534551 PRR5LQ6MZQ0 368 aa18.04■□□□□ 0.48
VPS11-205ENST00000534551 GIGYF2Q6Y7W6 1299 aaKnown RBP18.04■□□□□ 0.48
VPS11-205ENST00000534551 SETDB2Q96T68 719 aa18.04■□□□□ 0.48
VPS11-205ENST00000534551 STK31Q9BXU1 1019 aa18.04■□□□□ 0.48
VPS11-205ENST00000534551 ADCY9O60503 1353 aa18.04■□□□□ 0.48
VPS11-205ENST00000534551 ZBED9Q6R2W3 1325 aa18.03■□□□□ 0.48
VPS11-205ENST00000534551 UTRNP46939 3433 aa18.03■□□□□ 0.48
VPS11-205ENST00000534551 CLEC4GQ6UXB4 293 aa18.03■□□□□ 0.48
VPS11-205ENST00000534551 CNBD1Q8NA66 436 aa18.03■□□□□ 0.48
VPS11-205ENST00000534551 CD2APQ9Y5K6 639 aa18.03■□□□□ 0.48
VPS11-205ENST00000534551 ARFGEF1Q9Y6D6 1849 aa18.02■□□□□ 0.48
VPS11-205ENST00000534551 PLBD2Q8NHP8 589 aa18.02■□□□□ 0.48
VPS11-205ENST00000534551 BCL2L13Q9BXK5 485 aa18.02■□□□□ 0.48
VPS11-205ENST00000534551 ATP5J2-PTCD1G3V325 749 aa18.01■□□□□ 0.47
VPS11-205ENST00000534551 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
VPS11-205ENST00000534551 DPEP1P16444 411 aa18.01■□□□□ 0.47
VPS11-205ENST00000534551 CHRNA5P30532 468 aa18.01■□□□□ 0.47
VPS11-205ENST00000534551 ANKRD13DQ6ZTN6 518 aa18.01■□□□□ 0.47
VPS11-205ENST00000534551 NBPF5PQ86XG9 351 aaPredicted RBP18.01■□□□□ 0.47
VPS11-205ENST00000534551 NUTM1Q86Y26 1132 aa18.01■□□□□ 0.47
VPS11-205ENST00000534551 ZNF34Q8IZ26 560 aa18.01■□□□□ 0.47
VPS11-205ENST00000534551 A0A0G2JLW4 131 aa18■□□□□ 0.47
VPS11-205ENST00000534551 RGL2O15211 777 aa18■□□□□ 0.47
VPS11-205ENST00000534551 SUSD4Q5VX71 490 aa18■□□□□ 0.47
VPS11-205ENST00000534551 PELP1Q8IZL8 1130 aaKnown RBP18■□□□□ 0.47
VPS11-205ENST00000534551 TAF1P21675 1872 aa18■□□□□ 0.47
VPS11-205ENST00000534551 NPHP1O15259 732 aa17.99■□□□□ 0.47
VPS11-205ENST00000534551 NTSR2O95665 410 aa17.99■□□□□ 0.47
VPS11-205ENST00000534551 FLIIQ13045 1269 aa17.99■□□□□ 0.47
VPS11-205ENST00000534551 TCIRG1Q13488 830 aa17.99■□□□□ 0.47
VPS11-205ENST00000534551 RIC3Q7Z5B4 369 aa17.99■□□□□ 0.47
VPS11-205ENST00000534551 YBX3P16989 372 aaKnown RBP eCLIP17.98■□□□□ 0.47
VPS11-205ENST00000534551 ERFEQ4G0M1 354 aa17.98■□□□□ 0.47
VPS11-205ENST00000534551 MYD88Q99836 296 aa17.98■□□□□ 0.47
VPS11-205ENST00000534551 MAP3K2Q9Y2U5 619 aa17.98■□□□□ 0.47
VPS11-205ENST00000534551 IBTKQ9P2D0 1353 aaPredicted RBP17.98■□□□□ 0.47
VPS11-205ENST00000534551 MYH3P11055 1940 aa17.98■□□□□ 0.47
VPS11-205ENST00000534551 SLX4Q8IY92 1834 aa17.98■□□□□ 0.47
VPS11-205ENST00000534551 PI4KAP2A4QPH2 592 aa17.97■□□□□ 0.47
VPS11-205ENST00000534551 ST5P78524 1137 aa17.97■□□□□ 0.47
VPS11-205ENST00000534551 FKBP5Q13451 457 aaPredicted RBP17.97■□□□□ 0.47
VPS11-205ENST00000534551 NLRP10Q86W26 655 aa17.97■□□□□ 0.47
VPS11-205ENST00000534551 SYNE4Q8N205 404 aa17.97■□□□□ 0.47
VPS11-205ENST00000534551 PI4KAP1Q8N8J0 262 aa17.97■□□□□ 0.47
VPS11-205ENST00000534551 SSH1Q8WYL5 1049 aa17.97■□□□□ 0.47
VPS11-205ENST00000534551 ISCA1Q9BUE6 129 aa17.97■□□□□ 0.47
VPS11-205ENST00000534551 COL4A1P02462 1669 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms