RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 XAGE3Q8WTP9 111 aa17.36■□□□□ 0.37
CMTM1-219ENST00000533953 IL16Q14005 1332 aa17.36■□□□□ 0.37
CMTM1-219ENST00000533953 ZNF428Q96B54 188 aa17.35■□□□□ 0.37
CMTM1-219ENST00000533953 DDX21Q9NR30 783 aaKnown RBP eCLIP17.35■□□□□ 0.37
CMTM1-219ENST00000533953 FANCIQ9NVI1 1328 aa17.35■□□□□ 0.37
CMTM1-219ENST00000533953 DPEP1P16444 411 aa17.34■□□□□ 0.37
CMTM1-219ENST00000533953 ERBB4Q15303 1308 aa17.34■□□□□ 0.37
CMTM1-219ENST00000533953 MAP3K15Q6ZN16 1313 aa17.34■□□□□ 0.37
CMTM1-219ENST00000533953 SETDB2Q96T68 719 aa17.34■□□□□ 0.37
CMTM1-219ENST00000533953 ZNF521Q96K83 1311 aa17.33■□□□□ 0.36
CMTM1-219ENST00000533953 HOXB7P09629 217 aa17.33■□□□□ 0.36
CMTM1-219ENST00000533953 YBX3P16989 372 aaKnown RBP eCLIP17.33■□□□□ 0.36
CMTM1-219ENST00000533953 GPTP24298 496 aa17.33■□□□□ 0.36
CMTM1-219ENST00000533953 CHRNA5P30532 468 aa17.33■□□□□ 0.36
CMTM1-219ENST00000533953 EXOSC9Q06265 439 aaKnown RBP17.33■□□□□ 0.36
CMTM1-219ENST00000533953 GPR162Q16538 588 aa17.33■□□□□ 0.36
CMTM1-219ENST00000533953 KIF6Q6ZMV9 814 aa17.33■□□□□ 0.36
CMTM1-219ENST00000533953 PHAXQ9H814 394 aaKnown RBP17.33■□□□□ 0.36
CMTM1-219ENST00000533953 NIP7Q9Y221 180 aaKnown RBP eCLIP17.33■□□□□ 0.36
CMTM1-219ENST00000533953 CARMIL3Q8ND23 1372 aa17.32■□□□□ 0.36
CMTM1-219ENST00000533953 CLEC4GQ6UXB4 293 aa17.32■□□□□ 0.36
CMTM1-219ENST00000533953 CDCA7LQ96GN5 454 aa17.32■□□□□ 0.36
CMTM1-219ENST00000533953 LAMB4A4D0S4 1761 aa17.32■□□□□ 0.36
CMTM1-219ENST00000533953 C10orf71Q711Q0 1435 aa17.31■□□□□ 0.36
CMTM1-219ENST00000533953 ERVV-1B6SEH8 477 aa17.31■□□□□ 0.36
CMTM1-219ENST00000533953 TWISTNBQ3B726 338 aaPredicted RBP17.31■□□□□ 0.36
CMTM1-219ENST00000533953 PRR5LQ6MZQ0 368 aa17.31■□□□□ 0.36
CMTM1-219ENST00000533953 DBF4Q9UBU7 674 aaPredicted RBP17.31■□□□□ 0.36
CMTM1-219ENST00000533953 ZNF652Q9Y2D9 606 aa17.31■□□□□ 0.36
CMTM1-219ENST00000533953 KCNA3P22001 575 aa17.3■□□□□ 0.36
CMTM1-219ENST00000533953 GOLGA2Q08379 1002 aa17.3■□□□□ 0.36
CMTM1-219ENST00000533953 TGFB2P61812 414 aa17.29■□□□□ 0.36
CMTM1-219ENST00000533953 GIGYF2Q6Y7W6 1299 aaKnown RBP17.29■□□□□ 0.36
CMTM1-219ENST00000533953 NBPF5PQ86XG9 351 aaPredicted RBP17.29■□□□□ 0.36
CMTM1-219ENST00000533953 PXDNLA1KZ92 1463 aa17.29■□□□□ 0.36
CMTM1-219ENST00000533953 UBN2Q6ZU65 1347 aa17.28■□□□□ 0.36
CMTM1-219ENST00000533953 DCAF8L1A6NGE4 600 aa17.28■□□□□ 0.36
CMTM1-219ENST00000533953 NPHP1O15259 732 aa17.28■□□□□ 0.36
CMTM1-219ENST00000533953 VAMP4O75379 141 aa17.28■□□□□ 0.36
CMTM1-219ENST00000533953 CCDC30Q5VVM6 783 aa17.28■□□□□ 0.36
CMTM1-219ENST00000533953 SUSD4Q5VX71 490 aa17.28■□□□□ 0.36
CMTM1-219ENST00000533953 G2E3Q7L622 706 aa17.28■□□□□ 0.36
CMTM1-219ENST00000533953 CNBD1Q8NA66 436 aa17.28■□□□□ 0.36
CMTM1-219ENST00000533953 HYPKQ9NX55 129 aa17.28■□□□□ 0.36
CMTM1-219ENST00000533953 SCN7AQ01118 1682 aa17.27■□□□□ 0.36
CMTM1-219ENST00000533953 NUTM1Q86Y26 1132 aa17.27■□□□□ 0.36
CMTM1-219ENST00000533953 ZNF34Q8IZ26 560 aa17.27■□□□□ 0.36
CMTM1-219ENST00000533953 MYH16Q9H6N6 1097 aa17.27■□□□□ 0.36
CMTM1-219ENST00000533953 ANKRD13DQ6ZTN6 518 aa17.26■□□□□ 0.35
CMTM1-219ENST00000533953 C2CD5Q86YS7 1000 aa17.26■□□□□ 0.35
CMTM1-219ENST00000533953 BCS1LQ9Y276 419 aa17.26■□□□□ 0.35
CMTM1-219ENST00000533953 ATP5J2-PTCD1G3V325 749 aa17.25■□□□□ 0.35
CMTM1-219ENST00000533953 SLC4A2P04920 1241 aa17.25■□□□□ 0.35
CMTM1-219ENST00000533953 SLFN5Q08AF3 891 aa17.25■□□□□ 0.35
CMTM1-219ENST00000533953 PLBD2Q8NHP8 589 aa17.25■□□□□ 0.35
CMTM1-219ENST00000533953 RGL2O15211 777 aa17.24■□□□□ 0.35
CMTM1-219ENST00000533953 GTF2E1P29083 439 aaPredicted RBP17.24■□□□□ 0.35
CMTM1-219ENST00000533953 TCIRG1Q13488 830 aa17.24■□□□□ 0.35
CMTM1-219ENST00000533953 ERFEQ4G0M1 354 aa17.24■□□□□ 0.35
CMTM1-219ENST00000533953 TPTE2Q6XPS3 522 aa17.24■□□□□ 0.35
CMTM1-219ENST00000533953 SYNE4Q8N205 404 aa17.24■□□□□ 0.35
CMTM1-219ENST00000533953 BRIP1Q9BX63 1249 aa17.24■□□□□ 0.35
CMTM1-219ENST00000533953 BCORQ6W2J9 1755 aa17.24■□□□□ 0.35
CMTM1-219ENST00000533953 ST5P78524 1137 aa17.23■□□□□ 0.35
CMTM1-219ENST00000533953 RIC3Q7Z5B4 369 aa17.23■□□□□ 0.35
CMTM1-219ENST00000533953 STK31Q9BXU1 1019 aa17.23■□□□□ 0.35
CMTM1-219ENST00000533953 PIM2Q9P1W9 311 aa17.23■□□□□ 0.35
CMTM1-219ENST00000533953 AFDNP55196 1824 aaKnown RBP17.23■□□□□ 0.35
CMTM1-219ENST00000533953 ATP10DQ9P241 1426 aa17.22■□□□□ 0.35
CMTM1-219ENST00000533953 E9PSI1 815 aa17.22■□□□□ 0.35
CMTM1-219ENST00000533953 H0YIN7 160 aa17.22■□□□□ 0.35
CMTM1-219ENST00000533953 HNRNPUQ00839 825 aaKnown RBP eCLIP17.22■□□□□ 0.35
CMTM1-219ENST00000533953 NLRP10Q86W26 655 aa17.22■□□□□ 0.35
CMTM1-219ENST00000533953 ZNF622Q969S3 477 aaKnown RBP eCLIP17.22■□□□□ 0.35
CMTM1-219ENST00000533953 N4BP2Q86UW6 1770 aaPredicted RBP17.22■□□□□ 0.35
CMTM1-219ENST00000533953 ABCC12Q96J65 1359 aa17.21■□□□□ 0.35
CMTM1-219ENST00000533953 NTSR2O95665 410 aa17.21■□□□□ 0.35
CMTM1-219ENST00000533953 C3orf67Q6ZVT6 689 aa17.21■□□□□ 0.35
CMTM1-219ENST00000533953 ZNF219Q9P2Y4 722 aaPredicted RBP17.21■□□□□ 0.35
CMTM1-219ENST00000533953 NRXN2Q9P2S2 1712 aa17.21■□□□□ 0.35
CMTM1-219ENST00000533953 PDE6BP35913 854 aa17.2■□□□□ 0.34
CMTM1-219ENST00000533953 DALRD3Q5D0E6 543 aaKnown RBP17.2■□□□□ 0.34
CMTM1-219ENST00000533953 RTL5Q5HYW3 569 aaPredicted RBP17.2■□□□□ 0.34
CMTM1-219ENST00000533953 JARID2Q92833 1246 aaPredicted RBP17.2■□□□□ 0.34
CMTM1-219ENST00000533953 MYD88Q99836 296 aa17.2■□□□□ 0.34
CMTM1-219ENST00000533953 UTP14AQ9BVJ6 771 aaKnown RBP17.2■□□□□ 0.34
CMTM1-219ENST00000533953 KIAA1551Q9HCM1 1747 aa17.2■□□□□ 0.34
CMTM1-219ENST00000533953 PI4KAP2A4QPH2 592 aa17.19■□□□□ 0.34
CMTM1-219ENST00000533953 HSP90AB3PQ58FF7 597 aa17.19■□□□□ 0.34
CMTM1-219ENST00000533953 TRMT2AQ8IZ69 625 aaKnown RBP17.19■□□□□ 0.34
CMTM1-219ENST00000533953 PI4KAP1Q8N8J0 262 aa17.19■□□□□ 0.34
CMTM1-219ENST00000533953 ISCA1Q9BUE6 129 aa17.19■□□□□ 0.34
CMTM1-219ENST00000533953 MAP3K2Q9Y2U5 619 aa17.19■□□□□ 0.34
CMTM1-219ENST00000533953 KIF13BQ9NQT8 1826 aa17.19■□□□□ 0.34
CMTM1-219ENST00000533953 GRIN3BO60391 1043 aa17.18■□□□□ 0.34
CMTM1-219ENST00000533953 SRGNP10124 158 aa17.18■□□□□ 0.34
CMTM1-219ENST00000533953 HCLS1P14317 486 aaPredicted RBP17.18■□□□□ 0.34
CMTM1-219ENST00000533953 PARP10Q53GL7 1025 aa17.18■□□□□ 0.34
CMTM1-219ENST00000533953 ARHGAP27Q6ZUM4 889 aa17.18■□□□□ 0.34
CMTM1-219ENST00000533953 PPP1R42Q7Z4L9 355 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms