RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 NFATC2IPQ8NCF5 419 aa14.84□□□□□ -0.03
CSDE1-215ENST00000533818 ZIC5Q96T25 663 aa14.84□□□□□ -0.03
CSDE1-215ENST00000533818 PRR5LQ6MZQ0 368 aa14.83□□□□□ -0.04
CSDE1-215ENST00000533818 CTU1Q7Z7A3 348 aaKnown RBP14.83□□□□□ -0.04
CSDE1-215ENST00000533818 C7orf43Q8WVR3 580 aa14.83□□□□□ -0.04
CSDE1-215ENST00000533818 HPS5Q9UPZ3 1129 aa14.83□□□□□ -0.04
CSDE1-215ENST00000533818 GJA3Q9Y6H8 435 aa14.83□□□□□ -0.04
CSDE1-215ENST00000533818 COL15A1P39059 1388 aa14.83□□□□□ -0.04
CSDE1-215ENST00000533818 SRGNP10124 158 aa14.82□□□□□ -0.04
CSDE1-215ENST00000533818 CYP19A1P11511 503 aaPredicted RBP14.82□□□□□ -0.04
CSDE1-215ENST00000533818 EPS15P42566 896 aa14.82□□□□□ -0.04
CSDE1-215ENST00000533818 MASTLQ96GX5 879 aa14.82□□□□□ -0.04
CSDE1-215ENST00000533818 ST20-MTHFSA0A0A6YYL1 179 aa14.81□□□□□ -0.04
CSDE1-215ENST00000533818 MTHFSP49914 203 aa14.81□□□□□ -0.04
CSDE1-215ENST00000533818 TBC1D9BQ66K14 1250 aa14.81□□□□□ -0.04
CSDE1-215ENST00000533818 USP50Q70EL3 339 aaPredicted RBP14.81□□□□□ -0.04
CSDE1-215ENST00000533818 SAGE1Q9NXZ1 904 aa14.81□□□□□ -0.04
CSDE1-215ENST00000533818 SLX4Q8IY92 1834 aa14.8□□□□□ -0.04
CSDE1-215ENST00000533818 NPHP1O15259 732 aa14.8□□□□□ -0.04
CSDE1-215ENST00000533818 AKAP4Q5JQC9 854 aa14.8□□□□□ -0.04
CSDE1-215ENST00000533818 ZBTB1Q9Y2K1 713 aa14.8□□□□□ -0.04
CSDE1-215ENST00000533818 TRPA1O75762 1119 aa14.79□□□□□ -0.04
CSDE1-215ENST00000533818 IARSP41252 1262 aaKnown RBP14.79□□□□□ -0.04
CSDE1-215ENST00000533818 PLEKHO1Q53GL0 409 aaPredicted RBP14.79□□□□□ -0.04
CSDE1-215ENST00000533818 ZNF530Q6P9A1 599 aaPredicted RBP14.79□□□□□ -0.04
CSDE1-215ENST00000533818 RTKN2Q8IZC4 609 aa14.79□□□□□ -0.04
CSDE1-215ENST00000533818 SLC17A8Q8NDX2 589 aa14.79□□□□□ -0.04
CSDE1-215ENST00000533818 JDP2Q8WYK2 163 aa14.79□□□□□ -0.04
CSDE1-215ENST00000533818 WASHC2AQ641Q2 1341 aa14.78□□□□□ -0.04
CSDE1-215ENST00000533818 SCNN1DP51172 638 aa14.78□□□□□ -0.04
CSDE1-215ENST00000533818 EIF6P56537 245 aaKnown RBP14.78□□□□□ -0.04
CSDE1-215ENST00000533818 SYNE4Q8N205 404 aa14.78□□□□□ -0.04
CSDE1-215ENST00000533818 CARD11Q9BXL7 1154 aa14.78□□□□□ -0.04
CSDE1-215ENST00000533818 ZNF408Q9H9D4 720 aa14.78□□□□□ -0.04
CSDE1-215ENST00000533818 TJP1Q07157 1748 aa14.78□□□□□ -0.04
CSDE1-215ENST00000533818 OLFM4Q6UX06 510 aa14.77□□□□□ -0.05
CSDE1-215ENST00000533818 CNBD1Q8NA66 436 aa14.77□□□□□ -0.05
CSDE1-215ENST00000533818 RNF186Q9NXI6 227 aa14.77□□□□□ -0.05
CSDE1-215ENST00000533818 ANKRD31Q8N7Z5 1873 aa14.77□□□□□ -0.05
CSDE1-215ENST00000533818 TRPM7Q96QT4 1865 aa14.77□□□□□ -0.05
CSDE1-215ENST00000533818 COL11A2P13942 1736 aaPredicted RBP14.76□□□□□ -0.05
CSDE1-215ENST00000533818 CANXP27824 592 aaKnown RBP14.76□□□□□ -0.05
CSDE1-215ENST00000533818 ST5P78524 1137 aa14.76□□□□□ -0.05
CSDE1-215ENST00000533818 PKN2Q16513 984 aaKnown RBP14.76□□□□□ -0.05
CSDE1-215ENST00000533818 GLIS2Q9BZE0 524 aaPredicted RBP14.76□□□□□ -0.05
CSDE1-215ENST00000533818 A0A0C4DFX4 3053 aa14.76□□□□□ -0.05
CSDE1-215ENST00000533818 A0A087WZG4 1122 aa14.74□□□□□ -0.05
CSDE1-215ENST00000533818 HUNKP57058 714 aa14.74□□□□□ -0.05
CSDE1-215ENST00000533818 KIF23Q02241 960 aaPredicted RBP14.74□□□□□ -0.05
CSDE1-215ENST00000533818 AMOTQ4VCS5 1084 aa14.74□□□□□ -0.05
CSDE1-215ENST00000533818 C1orf141Q5JVX7 400 aa14.74□□□□□ -0.05
CSDE1-215ENST00000533818 SETDB2Q96T68 719 aa14.74□□□□□ -0.05
CSDE1-215ENST00000533818 NPR1P16066 1061 aa14.73□□□□□ -0.05
CSDE1-215ENST00000533818 ADARB2Q9NS39 739 aaKnown RBP14.73□□□□□ -0.05
CSDE1-215ENST00000533818 EIF5P55010 431 aaKnown RBP14.72□□□□□ -0.05
CSDE1-215ENST00000533818 FAM155AB1AL88 458 aaPredicted RBP14.71□□□□□ -0.05
CSDE1-215ENST00000533818 EIF4A2Q14240 407 aaKnown RBP14.71□□□□□ -0.05
CSDE1-215ENST00000533818 CCDC102AQ96A19 550 aa14.71□□□□□ -0.05
CSDE1-215ENST00000533818 HDAC9Q9UKV0 1011 aa14.71□□□□□ -0.05
CSDE1-215ENST00000533818 CUL9Q8IWT3 2517 aa14.7□□□□□ -0.06
CSDE1-215ENST00000533818 RGMBQ6NW40 437 aa14.7□□□□□ -0.06
CSDE1-215ENST00000533818 GPRC5DQ9NZD1 345 aa14.7□□□□□ -0.06
CSDE1-215ENST00000533818 TBC1D2BQ9UPU7 963 aa14.7□□□□□ -0.06
CSDE1-215ENST00000533818 COLQQ9Y215 455 aaPredicted RBP14.7□□□□□ -0.06
CSDE1-215ENST00000533818 SLC39A6Q13433 755 aa14.69□□□□□ -0.06
CSDE1-215ENST00000533818 CDC37L1Q7L3B6 337 aa14.69□□□□□ -0.06
CSDE1-215ENST00000533818 PSMD1Q99460 953 aa14.69□□□□□ -0.06
CSDE1-215ENST00000533818 PGAP2Q9UHJ9 254 aa14.69□□□□□ -0.06
CSDE1-215ENST00000533818 CACNA1SQ13698 1873 aa14.68□□□□□ -0.06
CSDE1-215ENST00000533818 TESK2Q96S53 571 aa14.68□□□□□ -0.06
CSDE1-215ENST00000533818 CSRNP1Q96S65 589 aa14.68□□□□□ -0.06
CSDE1-215ENST00000533818 ZNF330Q9Y3S2 320 aaPredicted RBP14.68□□□□□ -0.06
CSDE1-215ENST00000533818 STARD3NLO95772 234 aa14.67□□□□□ -0.06
CSDE1-215ENST00000533818 ZNF157P51786 506 aaPredicted RBP14.67□□□□□ -0.06
CSDE1-215ENST00000533818 LARGE2Q8N3Y3 721 aa14.67□□□□□ -0.06
CSDE1-215ENST00000533818 SLC52A2Q9HAB3 445 aa14.67□□□□□ -0.06
CSDE1-215ENST00000533818 POLKQ9UBT6 870 aa14.67□□□□□ -0.06
CSDE1-215ENST00000533818 ARFGEF2Q9Y6D5 1785 aa14.66□□□□□ -0.06
CSDE1-215ENST00000533818 ALDH1B1P30837 517 aa14.66□□□□□ -0.06
CSDE1-215ENST00000533818 FBXO46Q6PJ61 603 aaPredicted RBP14.66□□□□□ -0.06
CSDE1-215ENST00000533818 NBPF5PQ86XG9 351 aaPredicted RBP14.66□□□□□ -0.06
CSDE1-215ENST00000533818 VSIG10Q8N0Z9 540 aa14.66□□□□□ -0.06
CSDE1-215ENST00000533818 ZC3H15Q8WU90 426 aaKnown RBP14.66□□□□□ -0.06
CSDE1-215ENST00000533818 KLRG2A4D1S0 409 aaPredicted RBP14.65□□□□□ -0.06
CSDE1-215ENST00000533818 SLC24A1O60721 1099 aa14.65□□□□□ -0.06
CSDE1-215ENST00000533818 USP48Q86UV5 1035 aa14.65□□□□□ -0.06
CSDE1-215ENST00000533818 SIN3AQ96ST3 1273 aa14.65□□□□□ -0.06
CSDE1-215ENST00000533818 MKI67P46013 3256 aaKnown RBP14.65□□□□□ -0.06
CSDE1-215ENST00000533818 NEUROD1Q13562 356 aa14.64□□□□□ -0.07
CSDE1-215ENST00000533818 C2orf69Q8N8R5 385 aa14.64□□□□□ -0.07
CSDE1-215ENST00000533818 ZNF296Q8WUU4 475 aaPredicted RBP14.64□□□□□ -0.07
CSDE1-215ENST00000533818 COL4A5P29400 1685 aa14.64□□□□□ -0.07
CSDE1-215ENST00000533818 HIRAP54198 1017 aaPredicted RBP14.63□□□□□ -0.07
CSDE1-215ENST00000533818 DLK2Q6UY11 383 aa14.63□□□□□ -0.07
CSDE1-215ENST00000533818 NPM2Q86SE8 214 aaKnown RBP14.63□□□□□ -0.07
CSDE1-215ENST00000533818 NIM1KQ8IY84 436 aa14.63□□□□□ -0.07
CSDE1-215ENST00000533818 GBA2Q9HCG7 927 aaPredicted RBP14.63□□□□□ -0.07
CSDE1-215ENST00000533818 POTEFA5A3E0 1075 aa14.62□□□□□ -0.07
CSDE1-215ENST00000533818 CAMTA2O94983 1202 aa14.62□□□□□ -0.07
CSDE1-215ENST00000533818 GMPSP49915 693 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms