RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 MCM2P49736 904 aa23.47■■□□□ 1.35
UBXN1-215ENST00000533476 RIC3Q7Z5B4 369 aa23.47■■□□□ 1.35
UBXN1-215ENST00000533476 CLASRPQ8N2M8 674 aaKnown RBP23.47■■□□□ 1.35
UBXN1-215ENST00000533476 CYP2E1P05181 493 aaPredicted RBP23.47■■□□□ 1.35
UBXN1-215ENST00000533476 IGKV5-2P06315 115 aa23.47■■□□□ 1.35
UBXN1-215ENST00000533476 SNRPA1P09661 255 aaKnown RBP23.47■■□□□ 1.35
UBXN1-215ENST00000533476 TTC5Q8N0Z6 440 aa23.47■■□□□ 1.35
UBXN1-215ENST00000533476 KAZALD1Q96I82 304 aa23.47■■□□□ 1.35
UBXN1-215ENST00000533476 PALD1Q9ULE6 856 aa23.47■■□□□ 1.35
UBXN1-215ENST00000533476 GLRX3O76003 335 aaKnown RBP23.46■■□□□ 1.35
UBXN1-215ENST00000533476 NEK4P51957 841 aa23.46■■□□□ 1.35
UBXN1-215ENST00000533476 SKOR2Q2VWA4 1001 aaPredicted RBP23.46■■□□□ 1.35
UBXN1-215ENST00000533476 FAM43AQ8N2R8 423 aa23.46■■□□□ 1.35
UBXN1-215ENST00000533476 XAGE3Q8WTP9 111 aa23.46■■□□□ 1.35
UBXN1-215ENST00000533476 NEXNQ0ZGT2 675 aa23.45■■□□□ 1.35
UBXN1-215ENST00000533476 FMNL2Q96PY5 1086 aa23.45■■□□□ 1.35
UBXN1-215ENST00000533476 ISY1Q9ULR0 285 aaKnown RBP23.45■■□□□ 1.35
UBXN1-215ENST00000533476 LRP10Q7Z4F1 713 aa23.45■■□□□ 1.34
UBXN1-215ENST00000533476 BICC1Q9H694 974 aaKnown RBP23.45■■□□□ 1.34
UBXN1-215ENST00000533476 RTN4Q9NQC3 1192 aaKnown RBP23.45■■□□□ 1.34
UBXN1-215ENST00000533476 GOLGA6L3A6NEY3 463 aa23.44■■□□□ 1.34
UBXN1-215ENST00000533476 NEURL1BA8MQ27 555 aa23.44■■□□□ 1.34
UBXN1-215ENST00000533476 SGSM2O43147 1006 aa23.44■■□□□ 1.34
UBXN1-215ENST00000533476 MAP4K4O95819 1239 aaPredicted RBP23.44■■□□□ 1.34
UBXN1-215ENST00000533476 MYL6BP14649 208 aa23.44■■□□□ 1.34
UBXN1-215ENST00000533476 GPATCH3Q96I76 525 aa23.44■■□□□ 1.34
UBXN1-215ENST00000533476 METTL22Q9BUU2 404 aaPredicted RBP23.44■■□□□ 1.34
UBXN1-215ENST00000533476 GZF1Q9H116 711 aaPredicted RBP23.44■■□□□ 1.34
UBXN1-215ENST00000533476 IL25Q9H293 177 aa23.44■■□□□ 1.34
UBXN1-215ENST00000533476 COPS6Q7L5N1 327 aa23.43■■□□□ 1.34
UBXN1-215ENST00000533476 PA2G4Q9UQ80 394 aaKnown RBP23.43■■□□□ 1.34
UBXN1-215ENST00000533476 GOLGA6L22H0YM25 854 aa23.43■■□□□ 1.34
UBXN1-215ENST00000533476 HSPA4P34932 840 aa23.43■■□□□ 1.34
UBXN1-215ENST00000533476 ECHDC1Q9NTX5 307 aa23.43■■□□□ 1.34
UBXN1-215ENST00000533476 WDR17Q8IZU2 1322 aa23.42■■□□□ 1.34
UBXN1-215ENST00000533476 RAD50Q92878 1312 aa23.42■■□□□ 1.34
UBXN1-215ENST00000533476 BAG4O95429 457 aaKnown RBP23.42■■□□□ 1.34
UBXN1-215ENST00000533476 CABP4P57796 275 aa23.42■■□□□ 1.34
UBXN1-215ENST00000533476 GCKRQ14397 625 aa23.42■■□□□ 1.34
UBXN1-215ENST00000533476 ZGPATQ8N5A5 531 aaKnown RBP23.41■■□□□ 1.34
UBXN1-215ENST00000533476 USP16Q9Y5T5 823 aa23.41■■□□□ 1.34
UBXN1-215ENST00000533476 ABCA3Q99758 1704 aa23.41■■□□□ 1.34
UBXN1-215ENST00000533476 SOS2Q07890 1332 aaPredicted RBP23.41■■□□□ 1.34
UBXN1-215ENST00000533476 ARFGEF2Q9Y6D5 1785 aa23.41■■□□□ 1.34
UBXN1-215ENST00000533476 IFIT2P09913 472 aaKnown RBP23.41■■□□□ 1.34
UBXN1-215ENST00000533476 TMX3Q96JJ7 454 aa23.41■■□□□ 1.34
UBXN1-215ENST00000533476 MYD88Q99836 296 aa23.4■■□□□ 1.34
UBXN1-215ENST00000533476 CUL4AQ13619 759 aa23.39■■□□□ 1.34
UBXN1-215ENST00000533476 ANKRD13DQ6ZTN6 518 aa23.39■■□□□ 1.34
UBXN1-215ENST00000533476 PRDM11Q9NQV5 511 aa23.39■■□□□ 1.34
UBXN1-215ENST00000533476 COL5A2P05997 1499 aaPredicted RBP23.39■■□□□ 1.34
UBXN1-215ENST00000533476 PCDH11XQ9BZA7 1347 aa23.39■■□□□ 1.33
UBXN1-215ENST00000533476 PCDH11YQ9BZA8 1340 aa23.39■■□□□ 1.33
UBXN1-215ENST00000533476 COL15A1P39059 1388 aa23.39■■□□□ 1.33
UBXN1-215ENST00000533476 G3BP1Q13283 466 aaKnown RBP eCLIP23.39■■□□□ 1.33
UBXN1-215ENST00000533476 CERKQ8TCT0 537 aa23.39■■□□□ 1.33
UBXN1-215ENST00000533476 LSG1Q9H089 658 aaKnown RBP23.39■■□□□ 1.33
UBXN1-215ENST00000533476 AFDNP55196 1824 aaKnown RBP23.39■■□□□ 1.33
UBXN1-215ENST00000533476 UBR2Q8IWV8 1755 aa23.38■■□□□ 1.33
UBXN1-215ENST00000533476 AACSQ86V21 672 aa23.38■■□□□ 1.33
UBXN1-215ENST00000533476 SASH1O94885 1247 aa23.37■■□□□ 1.33
UBXN1-215ENST00000533476 ERBB4Q15303 1308 aa23.37■■□□□ 1.33
UBXN1-215ENST00000533476 PAPPAQ13219 1627 aa23.37■■□□□ 1.33
UBXN1-215ENST00000533476 XRCC6P12956 609 aaKnown RBP eCLIP23.36■■□□□ 1.33
UBXN1-215ENST00000533476 PKP1Q13835 747 aa23.36■■□□□ 1.33
UBXN1-215ENST00000533476 RUFY2Q8WXA3 655 aa23.36■■□□□ 1.33
UBXN1-215ENST00000533476 INTS4Q96HW7 963 aaKnown RBP23.36■■□□□ 1.33
UBXN1-215ENST00000533476 MRE11P49959 708 aa23.35■■□□□ 1.33
UBXN1-215ENST00000533476 ZCRB1Q8TBF4 217 aaKnown RBP23.35■■□□□ 1.33
UBXN1-215ENST00000533476 DIAPH3Q9NSV4 1193 aa23.35■■□□□ 1.33
UBXN1-215ENST00000533476 SLAIN2Q9P270 581 aa23.35■■□□□ 1.33
UBXN1-215ENST00000533476 KIAA1211Q6ZU35 1233 aa23.35■■□□□ 1.33
UBXN1-215ENST00000533476 TOM1L2Q6ZVM7 507 aa23.35■■□□□ 1.33
UBXN1-215ENST00000533476 EVI5LQ96CN4 794 aa23.35■■□□□ 1.33
UBXN1-215ENST00000533476 CWC27Q6UX04 472 aaKnown RBP23.34■■□□□ 1.33
UBXN1-215ENST00000533476 EAF2Q96CJ1 260 aaPredicted RBP23.34■■□□□ 1.33
UBXN1-215ENST00000533476 ZDHHC9Q9Y397 364 aa23.34■■□□□ 1.33
UBXN1-215ENST00000533476 ERVV-2B6SEH9 535 aa23.33■■□□□ 1.33
UBXN1-215ENST00000533476 EPHA10Q5JZY3 1008 aa23.33■■□□□ 1.33
UBXN1-215ENST00000533476 SHANK3Q9BYB0 1731 aa23.33■■□□□ 1.33
UBXN1-215ENST00000533476 PLBD2Q8NHP8 589 aa23.33■■□□□ 1.32
UBXN1-215ENST00000533476 UPF3BQ9BZI7 483 aaKnown RBP23.33■■□□□ 1.32
UBXN1-215ENST00000533476 SNX14Q9Y5W7 946 aa23.33■■□□□ 1.32
UBXN1-215ENST00000533476 KCPQ6ZWJ8 1503 aa23.32■■□□□ 1.32
UBXN1-215ENST00000533476 PIP4K2AP48426 406 aaPredicted RBP23.32■■□□□ 1.32
UBXN1-215ENST00000533476 NKX1-1Q15270 411 aaPredicted RBP23.32■■□□□ 1.32
UBXN1-215ENST00000533476 KLHL40Q2TBA0 621 aa23.32■■□□□ 1.32
UBXN1-215ENST00000533476 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.32■■□□□ 1.32
UBXN1-215ENST00000533476 RABL6Q3YEC7 729 aaPredicted RBP23.31■■□□□ 1.32
UBXN1-215ENST00000533476 CARD10Q9BWT7 1032 aa23.31■■□□□ 1.32
UBXN1-215ENST00000533476 COPRSQ9NQ92 184 aa23.31■■□□□ 1.32
UBXN1-215ENST00000533476 MCTP1Q6DN14 999 aa23.31■■□□□ 1.32
UBXN1-215ENST00000533476 NUP188Q5SRE5 1749 aa23.3■■□□□ 1.32
UBXN1-215ENST00000533476 HIP1O00291 1037 aa23.3■■□□□ 1.32
UBXN1-215ENST00000533476 SIL1Q9H173 461 aa23.3■■□□□ 1.32
UBXN1-215ENST00000533476 IL2RBP14784 551 aa23.29■■□□□ 1.32
UBXN1-215ENST00000533476 PIP4K2BP78356 416 aa23.29■■□□□ 1.32
UBXN1-215ENST00000533476 NHSL1Q5SYE7 1610 aa23.29■■□□□ 1.32
UBXN1-215ENST00000533476 RFX5P48382 616 aaPredicted RBP23.29■■□□□ 1.32
UBXN1-215ENST00000533476 CCDC8Q9H0W5 538 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms