RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 NBPF26B4DH59 902 aa15.91■□□□□ 0.14
SF3B2-213ENST00000533421 ERVV-1B6SEH8 477 aa15.91■□□□□ 0.14
SF3B2-213ENST00000533421 PIP4K2AP48426 406 aaPredicted RBP15.91■□□□□ 0.14
SF3B2-213ENST00000533421 NBPF10Q6P3W6 841 aaKnown RBP15.91■□□□□ 0.14
SF3B2-213ENST00000533421 ARHGAP27Q6ZUM4 889 aa15.91■□□□□ 0.14
SF3B2-213ENST00000533421 NBPF15Q8N660 670 aa15.91■□□□□ 0.14
SF3B2-213ENST00000533421 BRIP1Q9BX63 1249 aa15.91■□□□□ 0.14
SF3B2-213ENST00000533421 KCNA3P22001 575 aa15.9■□□□□ 0.14
SF3B2-213ENST00000533421 NBPF5PQ86XG9 351 aaPredicted RBP15.9■□□□□ 0.14
SF3B2-213ENST00000533421 C2CD5Q86YS7 1000 aa15.9■□□□□ 0.14
SF3B2-213ENST00000533421 CHL1O00533 1208 aa15.89■□□□□ 0.13
SF3B2-213ENST00000533421 HOXB7P09629 217 aa15.89■□□□□ 0.13
SF3B2-213ENST00000533421 CHRNA5P30532 468 aa15.89■□□□□ 0.13
SF3B2-213ENST00000533421 PRR5LQ6MZQ0 368 aa15.89■□□□□ 0.13
SF3B2-213ENST00000533421 TPTE2Q6XPS3 522 aa15.89■□□□□ 0.13
SF3B2-213ENST00000533421 TTLL6Q8N841 843 aa15.89■□□□□ 0.13
SF3B2-213ENST00000533421 CFAP44Q96MT7 982 aa15.89■□□□□ 0.13
SF3B2-213ENST00000533421 CHMP4AQ9BY43 222 aa15.89■□□□□ 0.13
SF3B2-213ENST00000533421 NIP7Q9Y221 180 aaKnown RBP eCLIP15.89■□□□□ 0.13
SF3B2-213ENST00000533421 DLEC1Q9Y238 1755 aa15.88■□□□□ 0.13
SF3B2-213ENST00000533421 MYL6BP14649 208 aa15.88■□□□□ 0.13
SF3B2-213ENST00000533421 EIF2S2P20042 333 aaKnown RBP15.88■□□□□ 0.13
SF3B2-213ENST00000533421 GTF2E1P29083 439 aaPredicted RBP15.88■□□□□ 0.13
SF3B2-213ENST00000533421 NGEFQ8N5V2 710 aa15.88■□□□□ 0.13
SF3B2-213ENST00000533421 NYXQ9GZU5 481 aa15.88■□□□□ 0.13
SF3B2-213ENST00000533421 MAP3K15Q6ZN16 1313 aa15.88■□□□□ 0.13
SF3B2-213ENST00000533421 GNAI1P63096 354 aa15.87■□□□□ 0.13
SF3B2-213ENST00000533421 ATP10DQ9P241 1426 aa15.86■□□□□ 0.13
SF3B2-213ENST00000533421 GPBP1L1Q9HC44 474 aaPredicted RBP15.86■□□□□ 0.13
SF3B2-213ENST00000533421 CEP350Q5VT06 3117 aa15.85■□□□□ 0.13
SF3B2-213ENST00000533421 KRT24Q2M2I5 525 aa15.85■□□□□ 0.13
SF3B2-213ENST00000533421 CNKSR1Q969H4 720 aa15.85■□□□□ 0.13
SF3B2-213ENST00000533421 ZNF622Q969S3 477 aaKnown RBP eCLIP15.85■□□□□ 0.132e-19■□□□□ 9.2
SF3B2-213ENST00000533421 IFT57Q9NWB7 429 aa15.85■□□□□ 0.13
SF3B2-213ENST00000533421 ADCY9O60503 1353 aa15.85■□□□□ 0.13
SF3B2-213ENST00000533421 HSP90AB3PQ58FF7 597 aa15.84■□□□□ 0.13
SF3B2-213ENST00000533421 SOGA3Q5TF21 947 aa15.84■□□□□ 0.13
SF3B2-213ENST00000533421 STYK1Q6J9G0 422 aa15.84■□□□□ 0.13
SF3B2-213ENST00000533421 NUP98P52948 1817 aa15.83■□□□□ 0.12
SF3B2-213ENST00000533421 ANKRD31Q8N7Z5 1873 aa15.83■□□□□ 0.12
SF3B2-213ENST00000533421 HLFQ16534 295 aa15.83■□□□□ 0.12
SF3B2-213ENST00000533421 PARP10Q53GL7 1025 aa15.83■□□□□ 0.12
SF3B2-213ENST00000533421 HDGFL1Q5TGJ6 251 aa15.83■□□□□ 0.12
SF3B2-213ENST00000533421 GIGYF2Q6Y7W6 1299 aaKnown RBP15.83■□□□□ 0.12
SF3B2-213ENST00000533421 PPP1R42Q7Z4L9 355 aa15.83■□□□□ 0.12
SF3B2-213ENST00000533421 WWC1Q8IX03 1113 aa15.83■□□□□ 0.12
SF3B2-213ENST00000533421 MASTLQ96GX5 879 aa15.83■□□□□ 0.12
SF3B2-213ENST00000533421 DDX21Q9NR30 783 aaKnown RBP eCLIP15.83■□□□□ 0.12
SF3B2-213ENST00000533421 IBTKQ9P2D0 1353 aaPredicted RBP15.83■□□□□ 0.12
SF3B2-213ENST00000533421 NCBP3Q53F19 620 aaKnown RBP15.82■□□□□ 0.12
SF3B2-213ENST00000533421 TTLL7Q6ZT98 887 aa15.82■□□□□ 0.12
SF3B2-213ENST00000533421 TSR2Q969E8 191 aaKnown RBP15.82■□□□□ 0.12
SF3B2-213ENST00000533421 ZBTB3Q9H5J0 574 aa15.82■□□□□ 0.12
SF3B2-213ENST00000533421 DBF4Q9UBU7 674 aaPredicted RBP15.82■□□□□ 0.12
SF3B2-213ENST00000533421 SRGNP10124 158 aa15.81■□□□□ 0.12
SF3B2-213ENST00000533421 NPR1P16066 1061 aa15.81■□□□□ 0.12
SF3B2-213ENST00000533421 CCDC27Q2M243 656 aa15.81■□□□□ 0.12
SF3B2-213ENST00000533421 MBIPQ9NS73 344 aa15.81■□□□□ 0.12
SF3B2-213ENST00000533421 ZC3H4Q9UPT8 1303 aaKnown RBP15.81■□□□□ 0.12
SF3B2-213ENST00000533421 RNF123Q5XPI4 1314 aa15.8■□□□□ 0.12
SF3B2-213ENST00000533421 FAM177BA6PVY3 158 aa15.8■□□□□ 0.12
SF3B2-213ENST00000533421 PDIA6Q15084 440 aa15.8■□□□□ 0.12
SF3B2-213ENST00000533421 C9orf131Q5VYM1 1079 aa15.8■□□□□ 0.12
SF3B2-213ENST00000533421 DUSP27Q5VZP5 1158 aa15.8■□□□□ 0.12
SF3B2-213ENST00000533421 CCDC24Q8N4L8 307 aa15.8■□□□□ 0.12
SF3B2-213ENST00000533421 NECTIN2Q92692 538 aa15.8■□□□□ 0.12
SF3B2-213ENST00000533421 SPINK5Q9NQ38 1064 aaPredicted RBP15.8■□□□□ 0.12
SF3B2-213ENST00000533421 HYPKQ9NX55 129 aa15.8■□□□□ 0.12
SF3B2-213ENST00000533421 RNF181Q9P0P0 153 aa15.8■□□□□ 0.12
SF3B2-213ENST00000533421 ZNF853P0CG23 659 aa15.79■□□□□ 0.12
SF3B2-213ENST00000533421 LMNB1P20700 586 aa15.79■□□□□ 0.12
SF3B2-213ENST00000533421 ALDH1B1P30837 517 aa15.79■□□□□ 0.12
SF3B2-213ENST00000533421 C1QTNF8P60827 252 aa15.79■□□□□ 0.12
SF3B2-213ENST00000533421 COPS6Q7L5N1 327 aa15.79■□□□□ 0.12
SF3B2-213ENST00000533421 RIC1Q4ADV7 1423 aa15.78■□□□□ 0.12
SF3B2-213ENST00000533421 KDM2BQ8NHM5 1336 aa15.78■□□□□ 0.12
SF3B2-213ENST00000533421 COL11A2P13942 1736 aaPredicted RBP15.78■□□□□ 0.12
SF3B2-213ENST00000533421 KLRG2A4D1S0 409 aaPredicted RBP15.78■□□□□ 0.12
SF3B2-213ENST00000533421 GPTP24298 496 aa15.78■□□□□ 0.12
SF3B2-213ENST00000533421 AIMP1Q12904 312 aaKnown RBP15.78■□□□□ 0.12
SF3B2-213ENST00000533421 ZNF34Q8IZ26 560 aa15.78■□□□□ 0.12
SF3B2-213ENST00000533421 ZNF526Q8TF50 670 aaPredicted RBP15.78■□□□□ 0.12
SF3B2-213ENST00000533421 XAGE3Q8WTP9 111 aa15.78■□□□□ 0.12
SF3B2-213ENST00000533421 ARFGEF2Q9Y6D5 1785 aa15.77■□□□□ 0.12
SF3B2-213ENST00000533421 ELL2O00472 640 aaPredicted RBP15.77■□□□□ 0.12
SF3B2-213ENST00000533421 PRPF40BQ6NWY9 871 aaKnown RBP15.77■□□□□ 0.12
SF3B2-213ENST00000533421 LRP10Q7Z4F1 713 aa15.77■□□□□ 0.12
SF3B2-213ENST00000533421 RPGRQ92834 1020 aaKnown RBP15.77■□□□□ 0.12
SF3B2-213ENST00000533421 CHPF2Q9P2E5 772 aa15.77■□□□□ 0.12
SF3B2-213ENST00000533421 IL16Q14005 1332 aa15.76■□□□□ 0.11
SF3B2-213ENST00000533421 C21orf2O43822 256 aa15.76■□□□□ 0.11
SF3B2-213ENST00000533421 ANXA1P04083 346 aa15.76■□□□□ 0.11
SF3B2-213ENST00000533421 PROSER3Q2NL68 480 aa15.76■□□□□ 0.11
SF3B2-213ENST00000533421 PLBD2Q8NHP8 589 aa15.76■□□□□ 0.11
SF3B2-213ENST00000533421 UTP14AQ9BVJ6 771 aaKnown RBP15.76■□□□□ 0.11
SF3B2-213ENST00000533421 ANKRD36CQ5JPF3 1778 aa15.75■□□□□ 0.11
SF3B2-213ENST00000533421 UBN2Q6ZU65 1347 aa15.75■□□□□ 0.11
SF3B2-213ENST00000533421 LTBP3Q9NS15 1303 aa15.75■□□□□ 0.11
SF3B2-213ENST00000533421 HNRNPUQ00839 825 aaKnown RBP eCLIP15.75■□□□□ 0.11
SF3B2-213ENST00000533421 GOLGA2Q08379 1002 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms