RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 NIP7Q9Y221 180 aaKnown RBP eCLIP17.27■□□□□ 0.36
SF3B2-212ENST00000531589 HSPA6P17066 643 aa17.26■□□□□ 0.35
SF3B2-212ENST00000531589 WDR43Q15061 677 aaKnown RBP eCLIP17.26■□□□□ 0.35
SF3B2-212ENST00000531589 C16orf71Q8IYS4 520 aaPredicted RBP17.26■□□□□ 0.35
SF3B2-212ENST00000531589 DLEC1Q9Y238 1755 aa17.25■□□□□ 0.35
SF3B2-212ENST00000531589 ERVV-1B6SEH8 477 aa17.25■□□□□ 0.35
SF3B2-212ENST00000531589 TMPOP42166 694 aaKnown RBP17.25■□□□□ 0.35
SF3B2-212ENST00000531589 STYK1Q6J9G0 422 aa17.25■□□□□ 0.35
SF3B2-212ENST00000531589 KIF6Q6ZMV9 814 aa17.25■□□□□ 0.35
SF3B2-212ENST00000531589 MASTLQ96GX5 879 aa17.25■□□□□ 0.35
SF3B2-212ENST00000531589 RRP7AQ9Y3A4 280 aaKnown RBP17.25■□□□□ 0.35
SF3B2-212ENST00000531589 DLG5Q8TDM6 1919 aa17.25■□□□□ 0.35
SF3B2-212ENST00000531589 BCORQ6W2J9 1755 aa17.25■□□□□ 0.35
SF3B2-212ENST00000531589 ERBB4Q15303 1308 aa17.24■□□□□ 0.35
SF3B2-212ENST00000531589 SRGNP10124 158 aa17.24■□□□□ 0.35
SF3B2-212ENST00000531589 GTF2E1P29083 439 aaPredicted RBP17.24■□□□□ 0.35
SF3B2-212ENST00000531589 RASSF7Q02833 373 aa17.24■□□□□ 0.35
SF3B2-212ENST00000531589 SOGA3Q5TF21 947 aa17.24■□□□□ 0.35
SF3B2-212ENST00000531589 NMRK2Q9NPI5 230 aa17.24■□□□□ 0.35
SF3B2-212ENST00000531589 KDM3BQ7LBC6 1761 aa17.23■□□□□ 0.35
SF3B2-212ENST00000531589 C21orf2O43822 256 aa17.23■□□□□ 0.35
SF3B2-212ENST00000531589 NGEFQ8N5V2 710 aa17.23■□□□□ 0.35
SF3B2-212ENST00000531589 LAMB4A4D0S4 1761 aa17.23■□□□□ 0.35
SF3B2-212ENST00000531589 NPR1P16066 1061 aa17.22■□□□□ 0.35
SF3B2-212ENST00000531589 RUNDC1Q96C34 613 aa17.22■□□□□ 0.35
SF3B2-212ENST00000531589 NYXQ9GZU5 481 aa17.22■□□□□ 0.35
SF3B2-212ENST00000531589 MAP3K15Q6ZN16 1313 aa17.21■□□□□ 0.35
SF3B2-212ENST00000531589 ANKRD31Q8N7Z5 1873 aa17.21■□□□□ 0.35
SF3B2-212ENST00000531589 NFKBIEO00221 500 aa17.21■□□□□ 0.35
SF3B2-212ENST00000531589 MYL6BP14649 208 aa17.21■□□□□ 0.35
SF3B2-212ENST00000531589 HLFQ16534 295 aa17.21■□□□□ 0.35
SF3B2-212ENST00000531589 PRPF40BQ6NWY9 871 aaKnown RBP17.21■□□□□ 0.35
SF3B2-212ENST00000531589 ZNF219Q9P2Y4 722 aaPredicted RBP17.21■□□□□ 0.35
SF3B2-212ENST00000531589 KLRG2A4D1S0 409 aaPredicted RBP17.2■□□□□ 0.34
SF3B2-212ENST00000531589 FAM177BA6PVY3 158 aa17.2■□□□□ 0.34
SF3B2-212ENST00000531589 NEUROD2Q15784 382 aa17.2■□□□□ 0.34
SF3B2-212ENST00000531589 DPY19L2Q6NUT2 758 aa17.2■□□□□ 0.34
SF3B2-212ENST00000531589 RBM46Q8TBY0 533 aaKnown RBP17.2■□□□□ 0.34
SF3B2-212ENST00000531589 TAOK3Q9H2K8 898 aa17.2■□□□□ 0.34
SF3B2-212ENST00000531589 PRKRIP1Q9H875 184 aaPredicted RBP17.2■□□□□ 0.34
SF3B2-212ENST00000531589 RRAGCQ9HB90 399 aa17.2■□□□□ 0.34
SF3B2-212ENST00000531589 LTBP3Q9NS15 1303 aa17.2■□□□□ 0.34
SF3B2-212ENST00000531589 GLTPD2A6NH11 291 aa17.19■□□□□ 0.34
SF3B2-212ENST00000531589 ALDH1B1P30837 517 aa17.19■□□□□ 0.34
SF3B2-212ENST00000531589 CCDC146Q8IYE0 955 aa17.19■□□□□ 0.34
SF3B2-212ENST00000531589 SBF1O95248 1867 aa17.18■□□□□ 0.34
SF3B2-212ENST00000531589 EIF2S2P20042 333 aaKnown RBP17.18■□□□□ 0.34
SF3B2-212ENST00000531589 APLP1P51693 650 aa17.18■□□□□ 0.34
SF3B2-212ENST00000531589 TTLL7Q6ZT98 887 aa17.18■□□□□ 0.34
SF3B2-212ENST00000531589 ADAMTS8Q9UP79 889 aa17.18■□□□□ 0.34
SF3B2-212ENST00000531589 VEGFAP15692 232 aaPredicted RBP17.17■□□□□ 0.34
SF3B2-212ENST00000531589 PRELPP51888 382 aa17.17■□□□□ 0.34
SF3B2-212ENST00000531589 FSTL1Q12841 308 aa17.17■□□□□ 0.34
SF3B2-212ENST00000531589 ERFEQ4G0M1 354 aa17.17■□□□□ 0.34
SF3B2-212ENST00000531589 ZBTB3Q9H5J0 574 aa17.17■□□□□ 0.34
SF3B2-212ENST00000531589 COL11A2P13942 1736 aaPredicted RBP17.16■□□□□ 0.34
SF3B2-212ENST00000531589 CHL1O00533 1208 aa17.16■□□□□ 0.34
SF3B2-212ENST00000531589 ZEB1P37275 1124 aaPredicted RBP17.16■□□□□ 0.34
SF3B2-212ENST00000531589 CCDC93Q567U6 631 aa17.16■□□□□ 0.34
SF3B2-212ENST00000531589 GIGYF2Q6Y7W6 1299 aaKnown RBP17.16■□□□□ 0.34
SF3B2-212ENST00000531589 IBTKQ9P2D0 1353 aaPredicted RBP17.15■□□□□ 0.34
SF3B2-212ENST00000531589 PPP1R42Q7Z4L9 355 aa17.15■□□□□ 0.34
SF3B2-212ENST00000531589 LAS1LQ9Y4W2 734 aaKnown RBP17.15■□□□□ 0.34
SF3B2-212ENST00000531589 TNRC6CQ9HCJ0 1690 aaKnown RBP17.14■□□□□ 0.33
SF3B2-212ENST00000531589 GPTP24298 496 aa17.14■□□□□ 0.33
SF3B2-212ENST00000531589 PARP10Q53GL7 1025 aa17.14■□□□□ 0.33
SF3B2-212ENST00000531589 ZNF34Q8IZ26 560 aa17.14■□□□□ 0.33
SF3B2-212ENST00000531589 RTKN2Q8IZC4 609 aa17.14■□□□□ 0.33
SF3B2-212ENST00000531589 C7orf43Q8WVR3 580 aa17.14■□□□□ 0.33
SF3B2-212ENST00000531589 TRIM35Q9UPQ4 493 aa17.14■□□□□ 0.33
SF3B2-212ENST00000531589 PDIA6Q15084 440 aa17.13■□□□□ 0.33
SF3B2-212ENST00000531589 CRY2Q49AN0 593 aa17.13■□□□□ 0.33
SF3B2-212ENST00000531589 HSP90AB3PQ58FF7 597 aa17.13■□□□□ 0.33
SF3B2-212ENST00000531589 NUTM1Q86Y26 1132 aa17.13■□□□□ 0.33
SF3B2-212ENST00000531589 SMC1BQ8NDV3 1235 aa17.13■□□□□ 0.33
SF3B2-212ENST00000531589 RPGRQ92834 1020 aaKnown RBP17.13■□□□□ 0.33
SF3B2-212ENST00000531589 HOXB7P09629 217 aa17.12■□□□□ 0.33
SF3B2-212ENST00000531589 CALD1Q05682 793 aaKnown RBP17.12■□□□□ 0.33
SF3B2-212ENST00000531589 SUSD4Q5VX71 490 aa17.12■□□□□ 0.33
SF3B2-212ENST00000531589 CC2D2BQ6DHV5 1058 aa17.12■□□□□ 0.33
SF3B2-212ENST00000531589 SLX4Q8IY92 1834 aa17.12■□□□□ 0.33
SF3B2-212ENST00000531589 RIC1Q4ADV7 1423 aa17.12■□□□□ 0.33
SF3B2-212ENST00000531589 FER1L6Q2WGJ9 1857 aa17.12■□□□□ 0.33
SF3B2-212ENST00000531589 ARFGEF2Q9Y6D5 1785 aa17.11■□□□□ 0.33
SF3B2-212ENST00000531589 FKBP4Q02790 459 aaKnown RBP eCLIP17.11■□□□□ 0.33
SF3B2-212ENST00000531589 GRIPAP1Q4V328 841 aa17.11■□□□□ 0.33
SF3B2-212ENST00000531589 COPS6Q7L5N1 327 aa17.11■□□□□ 0.33
SF3B2-212ENST00000531589 LRP10Q7Z4F1 713 aa17.11■□□□□ 0.33
SF3B2-212ENST00000531589 CFAP44Q96MT7 982 aa17.11■□□□□ 0.33
SF3B2-212ENST00000531589 DDX21Q9NR30 783 aaKnown RBP eCLIP17.11■□□□□ 0.33
SF3B2-212ENST00000531589 UBN2Q6ZU65 1347 aa17.11■□□□□ 0.33
SF3B2-212ENST00000531589 NUP98P52948 1817 aa17.1■□□□□ 0.33
SF3B2-212ENST00000531589 HOXA10P31260 410 aaPredicted RBP17.1■□□□□ 0.33
SF3B2-212ENST00000531589 NECTIN2Q92692 538 aa17.1■□□□□ 0.33
SF3B2-212ENST00000531589 RBM17Q96I25 401 aaKnown RBP17.1■□□□□ 0.33
SF3B2-212ENST00000531589 NLRP3Q96P20 1036 aa17.1■□□□□ 0.33
SF3B2-212ENST00000531589 UTP14AQ9BVJ6 771 aaKnown RBP17.1■□□□□ 0.33
SF3B2-212ENST00000531589 RNF123Q5XPI4 1314 aa17.1■□□□□ 0.33
SF3B2-212ENST00000531589 TIAM2Q8IVF5 1701 aa17.1■□□□□ 0.33
SF3B2-212ENST00000531589 NTSR2O95665 410 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms