RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 C10orf71Q711Q0 1435 aa18.76■□□□□ 0.59
FOXR1-202ENST00000531539 FAM177BA6PVY3 158 aa18.76■□□□□ 0.59
FOXR1-202ENST00000531539 ERVV-1B6SEH8 477 aa18.76■□□□□ 0.59
FOXR1-202ENST00000531539 YY1P25490 414 aa18.76■□□□□ 0.59
FOXR1-202ENST00000531539 CHRNA5P30532 468 aa18.76■□□□□ 0.59
FOXR1-202ENST00000531539 DIEXFQ68CQ4 756 aaKnown RBP18.76■□□□□ 0.59
FOXR1-202ENST00000531539 C8orf58Q8NAV2 365 aa18.76■□□□□ 0.59
FOXR1-202ENST00000531539 TSR2Q969E8 191 aaKnown RBP18.76■□□□□ 0.59
FOXR1-202ENST00000531539 BCS1LQ9Y276 419 aa18.76■□□□□ 0.59
FOXR1-202ENST00000531539 MAP3K15Q6ZN16 1313 aa18.75■□□□□ 0.59
FOXR1-202ENST00000531539 HOXB7P09629 217 aa18.75■□□□□ 0.59
FOXR1-202ENST00000531539 KCNA3P22001 575 aa18.75■□□□□ 0.59
FOXR1-202ENST00000531539 COPS6Q7L5N1 327 aa18.75■□□□□ 0.59
FOXR1-202ENST00000531539 NBPF5PQ86XG9 351 aaPredicted RBP18.75■□□□□ 0.59
FOXR1-202ENST00000531539 DDX21Q9NR30 783 aaKnown RBP eCLIP18.75■□□□□ 0.59
FOXR1-202ENST00000531539 PIM2Q9P1W9 311 aa18.75■□□□□ 0.59
FOXR1-202ENST00000531539 PRR5LQ6MZQ0 368 aa18.74■□□□□ 0.59
FOXR1-202ENST00000531539 WDR63Q8IWG1 891 aa18.74■□□□□ 0.59
FOXR1-202ENST00000531539 XAGE3Q8WTP9 111 aa18.74■□□□□ 0.59
FOXR1-202ENST00000531539 CHPF2Q9P2E5 772 aa18.74■□□□□ 0.59
FOXR1-202ENST00000531539 PXDNLA1KZ92 1463 aa18.73■□□□□ 0.59
FOXR1-202ENST00000531539 CARMIL3Q8ND23 1372 aa18.73■□□□□ 0.59
FOXR1-202ENST00000531539 CCER2I3L3R5 266 aa18.73■□□□□ 0.59
FOXR1-202ENST00000531539 RGL2O15211 777 aa18.73■□□□□ 0.59
FOXR1-202ENST00000531539 TPTE2Q6XPS3 522 aa18.73■□□□□ 0.59
FOXR1-202ENST00000531539 LRP10Q7Z4F1 713 aa18.73■□□□□ 0.59
FOXR1-202ENST00000531539 C2CD5Q86YS7 1000 aa18.73■□□□□ 0.59
FOXR1-202ENST00000531539 CNBD1Q8NA66 436 aa18.73■□□□□ 0.59
FOXR1-202ENST00000531539 DBF4Q9UBU7 674 aaPredicted RBP18.73■□□□□ 0.59
FOXR1-202ENST00000531539 H0YIN7 160 aa18.72■□□□□ 0.59
FOXR1-202ENST00000531539 GTF2E1P29083 439 aaPredicted RBP18.72■□□□□ 0.59
FOXR1-202ENST00000531539 BRIP1Q9BX63 1249 aa18.72■□□□□ 0.59
FOXR1-202ENST00000531539 IL16Q14005 1332 aa18.72■□□□□ 0.59
FOXR1-202ENST00000531539 LAMB4A4D0S4 1761 aa18.71■□□□□ 0.59
FOXR1-202ENST00000531539 GPTP24298 496 aa18.71■□□□□ 0.59
FOXR1-202ENST00000531539 PDE6BP35913 854 aa18.71■□□□□ 0.59
FOXR1-202ENST00000531539 ST5P78524 1137 aa18.71■□□□□ 0.59
FOXR1-202ENST00000531539 DALRD3Q5D0E6 543 aaKnown RBP18.71■□□□□ 0.59
FOXR1-202ENST00000531539 GIGYF2Q6Y7W6 1299 aaKnown RBP18.71■□□□□ 0.59
FOXR1-202ENST00000531539 TSPYL6Q8N831 410 aa18.71■□□□□ 0.59
FOXR1-202ENST00000531539 MIER1Q8N108 512 aa18.7■□□□□ 0.58
FOXR1-202ENST00000531539 HYPKQ9NX55 129 aa18.7■□□□□ 0.58
FOXR1-202ENST00000531539 N4BP2Q86UW6 1770 aaPredicted RBP18.69■□□□□ 0.58
FOXR1-202ENST00000531539 ARHGAP27Q6ZUM4 889 aa18.69■□□□□ 0.58
FOXR1-202ENST00000531539 ZNF34Q8IZ26 560 aa18.69■□□□□ 0.58
FOXR1-202ENST00000531539 ZNF622Q969S3 477 aaKnown RBP eCLIP18.69■□□□□ 0.58
FOXR1-202ENST00000531539 CHMP4AQ9BY43 222 aa18.69■□□□□ 0.58
FOXR1-202ENST00000531539 AFDNP55196 1824 aaKnown RBP18.68■□□□□ 0.58
FOXR1-202ENST00000531539 CCDC30Q5VVM6 783 aa18.68■□□□□ 0.58
FOXR1-202ENST00000531539 ANKRD13DQ6ZTN6 518 aa18.68■□□□□ 0.58
FOXR1-202ENST00000531539 KIF13BQ9NQT8 1826 aa18.67■□□□□ 0.58
FOXR1-202ENST00000531539 SCN7AQ01118 1682 aa18.67■□□□□ 0.58
FOXR1-202ENST00000531539 TCERG1O14776 1098 aaKnown RBP18.67■□□□□ 0.58
FOXR1-202ENST00000531539 TWISTNBQ3B726 338 aaPredicted RBP18.67■□□□□ 0.58
FOXR1-202ENST00000531539 SUSD4Q5VX71 490 aa18.67■□□□□ 0.58
FOXR1-202ENST00000531539 PHAXQ9H814 394 aaKnown RBP18.67■□□□□ 0.58
FOXR1-202ENST00000531539 SPINK5Q9NQ38 1064 aaPredicted RBP18.67■□□□□ 0.58
FOXR1-202ENST00000531539 GOLGA2Q08379 1002 aa18.66■□□□□ 0.58
FOXR1-202ENST00000531539 NUTM1Q86Y26 1132 aa18.66■□□□□ 0.58
FOXR1-202ENST00000531539 TTLL6Q8N841 843 aa18.66■□□□□ 0.58
FOXR1-202ENST00000531539 NYXQ9GZU5 481 aa18.66■□□□□ 0.58
FOXR1-202ENST00000531539 PDZRN3Q9UPQ7 1066 aa18.66■□□□□ 0.58
FOXR1-202ENST00000531539 EXOSC9Q06265 439 aaKnown RBP18.65■□□□□ 0.58
FOXR1-202ENST00000531539 TCIRG1Q13488 830 aa18.65■□□□□ 0.58
FOXR1-202ENST00000531539 ERFEQ4G0M1 354 aa18.65■□□□□ 0.58
FOXR1-202ENST00000531539 PPP1R42Q7Z4L9 355 aa18.65■□□□□ 0.58
FOXR1-202ENST00000531539 PLBD2Q8NHP8 589 aa18.65■□□□□ 0.58
FOXR1-202ENST00000531539 FANCIQ9NVI1 1328 aa18.65■□□□□ 0.58
FOXR1-202ENST00000531539 NRXN2Q9P2S2 1712 aa18.64■□□□□ 0.57
FOXR1-202ENST00000531539 BCORQ6W2J9 1755 aa18.64■□□□□ 0.57
FOXR1-202ENST00000531539 PARP10Q53GL7 1025 aa18.64■□□□□ 0.57
FOXR1-202ENST00000531539 HSP90AB3PQ58FF7 597 aa18.64■□□□□ 0.57
FOXR1-202ENST00000531539 MYH16Q9H6N6 1097 aa18.64■□□□□ 0.57
FOXR1-202ENST00000531539 ZNF219Q9P2Y4 722 aaPredicted RBP18.64■□□□□ 0.57
FOXR1-202ENST00000531539 UBN2Q6ZU65 1347 aa18.64■□□□□ 0.57
FOXR1-202ENST00000531539 RIC3Q7Z5B4 369 aa18.63■□□□□ 0.57
FOXR1-202ENST00000531539 ZNF428Q96B54 188 aa18.63■□□□□ 0.57
FOXR1-202ENST00000531539 UTP14AQ9BVJ6 771 aaKnown RBP18.63■□□□□ 0.57
FOXR1-202ENST00000531539 STK31Q9BXU1 1019 aa18.63■□□□□ 0.57
FOXR1-202ENST00000531539 KIAA1551Q9HCM1 1747 aa18.63■□□□□ 0.57
FOXR1-202ENST00000531539 SRGNP10124 158 aa18.62■□□□□ 0.57
FOXR1-202ENST00000531539 MASTLQ96GX5 879 aa18.62■□□□□ 0.57
FOXR1-202ENST00000531539 ATP10DQ9P241 1426 aa18.62■□□□□ 0.57
FOXR1-202ENST00000531539 NUP98P52948 1817 aa18.62■□□□□ 0.57
FOXR1-202ENST00000531539 ATP5J2-PTCD1G3V325 749 aa18.61■□□□□ 0.57
FOXR1-202ENST00000531539 VAMP4O75379 141 aa18.61■□□□□ 0.57
FOXR1-202ENST00000531539 SLC4A2P04920 1241 aa18.61■□□□□ 0.57
FOXR1-202ENST00000531539 STYK1Q6J9G0 422 aa18.61■□□□□ 0.57
FOXR1-202ENST00000531539 NLRP10Q86W26 655 aa18.61■□□□□ 0.57
FOXR1-202ENST00000531539 CNKSR1Q969H4 720 aa18.61■□□□□ 0.57
FOXR1-202ENST00000531539 KLRG2A4D1S0 409 aaPredicted RBP18.6■□□□□ 0.57
FOXR1-202ENST00000531539 NTSR2O95665 410 aa18.6■□□□□ 0.57
FOXR1-202ENST00000531539 TRMT112Q9UI30 125 aaKnown RBP18.6■□□□□ 0.57
FOXR1-202ENST00000531539 ZNF521Q96K83 1311 aa18.59■□□□□ 0.57
FOXR1-202ENST00000531539 C21orf2O43822 256 aa18.59■□□□□ 0.57
FOXR1-202ENST00000531539 DDX58O95786 925 aaKnown RBP18.59■□□□□ 0.57
FOXR1-202ENST00000531539 NPR1P16066 1061 aa18.59■□□□□ 0.57
FOXR1-202ENST00000531539 SYNE4Q8N205 404 aa18.58■□□□□ 0.56
FOXR1-202ENST00000531539 ZNF784Q8NCA9 323 aaPredicted RBP18.58■□□□□ 0.56
FOXR1-202ENST00000531539 CHD4Q14839 1912 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms