RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 CCER1Q8TC90 406 aaPredicted RBP7.07□□□□□ -1.28
CD44-233ENST00000531141 HELQQ8TDG4 1101 aa7.07□□□□□ -1.28
CD44-233ENST00000531141 NANOS1Q8WY41 292 aaKnown RBP7.07□□□□□ -1.28
CD44-233ENST00000531141 CUEDC1Q9NWM3 386 aaPredicted RBP7.07□□□□□ -1.28
CD44-233ENST00000531141 SEPT3Q9UH03 358 aa7.07□□□□□ -1.28
CD44-233ENST00000531141 EGFL7Q9UHF1 273 aa7.07□□□□□ -1.28
CD44-233ENST00000531141 GJA3Q9Y6H8 435 aa7.07□□□□□ -1.28
CD44-233ENST00000531141 TGFBR3LH3BV60 316 aa7.06□□□□□ -1.28
CD44-233ENST00000531141 DGKZQ13574 1117 aa7.06□□□□□ -1.28
CD44-233ENST00000531141 COX20Q5RI15 118 aa7.06□□□□□ -1.28
CD44-233ENST00000531141 CAPN12Q6ZSI9 719 aa7.06□□□□□ -1.28
CD44-233ENST00000531141 TXNDC2Q86VQ3 553 aa7.06□□□□□ -1.28
CD44-233ENST00000531141 C7orf43Q8WVR3 580 aa7.06□□□□□ -1.28
CD44-233ENST00000531141 ANKIB1Q9P2G1 1089 aa7.06□□□□□ -1.28
CD44-233ENST00000531141 CDC14CA4D256 554 aa7.05□□□□□ -1.28
CD44-233ENST00000531141 TERTO14746 1132 aaKnown RBP7.05□□□□□ -1.28
CD44-233ENST00000531141 THBS1P07996 1170 aa7.05□□□□□ -1.28
CD44-233ENST00000531141 VSIG8P0DPA2 414 aa7.05□□□□□ -1.28
CD44-233ENST00000531141 SCNN1AP37088 669 aa7.05□□□□□ -1.28
CD44-233ENST00000531141 GTF3C2Q8WUA4 911 aaPredicted RBP7.05□□□□□ -1.28
CD44-233ENST00000531141 HSH2DQ96JZ2 352 aa7.05□□□□□ -1.28
CD44-233ENST00000531141 SUSD3Q96L08 255 aa7.05□□□□□ -1.28
CD44-233ENST00000531141 NEUROD4Q9HD90 331 aa7.05□□□□□ -1.28
CD44-233ENST00000531141 TNFRSF10BO14763 440 aa7.04□□□□□ -1.28
CD44-233ENST00000531141 FAM157BP0CG42 384 aa7.04□□□□□ -1.28
CD44-233ENST00000531141 SF3B2Q13435 895 aaKnown RBP7.04□□□□□ -1.28
CD44-233ENST00000531141 NAA30Q147X3 362 aaPredicted RBP7.04□□□□□ -1.28
CD44-233ENST00000531141 DBN1Q16643 649 aa7.04□□□□□ -1.28
CD44-233ENST00000531141 C11orf91Q3C1V1 193 aa7.04□□□□□ -1.28
CD44-233ENST00000531141 LRRC69Q6ZNQ3 347 aa7.04□□□□□ -1.28
CD44-233ENST00000531141 SV2AQ7L0J3 742 aa7.04□□□□□ -1.28
CD44-233ENST00000531141 ABTB2Q8N961 1025 aa7.04□□□□□ -1.28
CD44-233ENST00000531141 SLC16A10Q8TF71 515 aa7.04□□□□□ -1.28
CD44-233ENST00000531141 SAP130Q9H0E3 1048 aa7.04□□□□□ -1.28
CD44-233ENST00000531141 KLK14Q9P0G3 267 aa7.04□□□□□ -1.28
CD44-233ENST00000531141 LRFN2Q9ULH4 789 aa7.04□□□□□ -1.28
CD44-233ENST00000531141 BRD2P25440 801 aaKnown RBP7.03□□□□□ -1.28
CD44-233ENST00000531141 SERPINB4P48594 390 aa7.03□□□□□ -1.28
CD44-233ENST00000531141 VEGFBP49765 207 aa7.03□□□□□ -1.28
CD44-233ENST00000531141 UBAP2LQ14157 1087 aaKnown RBP7.03□□□□□ -1.28
CD44-233ENST00000531141 FOXR1Q6PIV2 292 aa7.03□□□□□ -1.28
CD44-233ENST00000531141 TRERF1Q96PN7 1200 aa7.03□□□□□ -1.28
CD44-233ENST00000531141 PHF24Q9UPV7 400 aa7.03□□□□□ -1.28
CD44-233ENST00000531141 DNMT3AQ9Y6K1 912 aaPredicted RBP7.03□□□□□ -1.28
CD44-233ENST00000531141 ATXN7O15265 892 aaPredicted RBP7.02□□□□□ -1.29
CD44-233ENST00000531141 ABL1P00519 1130 aa7.02□□□□□ -1.29
CD44-233ENST00000531141 TYRO3Q06418 890 aa7.02□□□□□ -1.29
CD44-233ENST00000531141 ZNF211Q13398 564 aaPredicted RBP7.02□□□□□ -1.29
CD44-233ENST00000531141 VWA5B2Q8N398 1253 aa7.02□□□□□ -1.29
CD44-233ENST00000531141 GTPBP3Q969Y2 492 aaKnown RBP7.02□□□□□ -1.29
CD44-233ENST00000531141 KLRG1Q96E93 195 aa7.02□□□□□ -1.29
CD44-233ENST00000531141 STIM2Q9P246 746 aa7.02□□□□□ -1.29
CD44-233ENST00000531141 ATXN7L1Q9ULK2 861 aaPredicted RBP7.02□□□□□ -1.29
CD44-233ENST00000531141 PCDHGC4Q9Y5F7 938 aa7.02□□□□□ -1.29
CD44-233ENST00000531141 IVNS1ABPQ9Y6Y0 642 aa7.02□□□□□ -1.29
CD44-233ENST00000531141 H3BRB1 525 aa7.01□□□□□ -1.29
CD44-233ENST00000531141 LAMC2Q13753 1193 aa7.01□□□□□ -1.29
CD44-233ENST00000531141 BTLAQ7Z6A9 289 aa7.01□□□□□ -1.29
CD44-233ENST00000531141 AEBP1Q8IUX7 1158 aa7.01□□□□□ -1.29
CD44-233ENST00000531141 ZNF280CQ8ND82 737 aa7.01□□□□□ -1.29
CD44-233ENST00000531141 IRF7Q92985 503 aa7.01□□□□□ -1.29
CD44-233ENST00000531141 IFT43Q96FT9 208 aa7.01□□□□□ -1.29
CD44-233ENST00000531141 ZCCHC2Q9C0B9 1178 aaKnown RBP7.01□□□□□ -1.29
CD44-233ENST00000531141 TUT1Q9H6E5 874 aaKnown RBP7.01□□□□□ -1.29
CD44-233ENST00000531141 NDFIP2Q9NV92 336 aa7.01□□□□□ -1.29
CD44-233ENST00000531141 BCS1LQ9Y276 419 aa7.01□□□□□ -1.29
CD44-233ENST00000531141 LOC100996750A0A140TA64 210 aa7□□□□□ -1.29
CD44-233ENST00000531141 DCDC2BA2VCK2 349 aa7□□□□□ -1.29
CD44-233ENST00000531141 EFSO43281 561 aa7□□□□□ -1.29
CD44-233ENST00000531141 ICMTO60725 284 aa7□□□□□ -1.29
CD44-233ENST00000531141 EPB42P16452 691 aa7□□□□□ -1.29
CD44-233ENST00000531141 NPR3P17342 541 aa7□□□□□ -1.29
CD44-233ENST00000531141 IDH3AP50213 366 aa7□□□□□ -1.29
CD44-233ENST00000531141 ARSDP51689 593 aa7□□□□□ -1.29
CD44-233ENST00000531141 FKBP4Q02790 459 aaKnown RBP eCLIP7□□□□□ -1.29
CD44-233ENST00000531141 GLYCTKQ8IVS8 523 aa7□□□□□ -1.29
CD44-233ENST00000531141 ETFBKMTQ8IXQ9 262 aa7□□□□□ -1.29
CD44-233ENST00000531141 CEP63Q96MT8 703 aa7□□□□□ -1.29
CD44-233ENST00000531141 CFHR5Q9BXR6 569 aa7□□□□□ -1.29
CD44-233ENST00000531141 KRTAP4-6Q9BYQ5 205 aa7□□□□□ -1.29
CD44-233ENST00000531141 DMGDHQ9UI17 866 aaKnown RBP7□□□□□ -1.29
CD44-233ENST00000531141 FAM13AO94988 1023 aa6.99□□□□□ -1.29
CD44-233ENST00000531141 MPSTP25325 297 aa6.99□□□□□ -1.29
CD44-233ENST00000531141 MTMR3Q13615 1198 aa6.99□□□□□ -1.29
CD44-233ENST00000531141 TREML1Q86YW5 311 aa6.99□□□□□ -1.29
CD44-233ENST00000531141 ABHD17AQ96GS6 310 aa6.99□□□□□ -1.29
CD44-233ENST00000531141 BRD7Q9NPI1 651 aa6.99□□□□□ -1.29
CD44-233ENST00000531141 FAM13BQ9NYF5 915 aa6.99□□□□□ -1.29
CD44-233ENST00000531141 ERBB4Q15303 1308 aa6.99□□□□□ -1.29
CD44-233ENST00000531141 SOWAHDA6NJG2 315 aa6.98□□□□□ -1.29
CD44-233ENST00000531141 GPR25O00155 361 aa6.98□□□□□ -1.29
CD44-233ENST00000531141 KHNYNO15037 678 aaKnown RBP6.98□□□□□ -1.29
CD44-233ENST00000531141 MICAL2O94851 1124 aa6.98□□□□□ -1.29
CD44-233ENST00000531141 MAPTP10636 758 aaKnown RBP6.98□□□□□ -1.29
CD44-233ENST00000531141 KCNQ4P56696 695 aa6.98□□□□□ -1.29
CD44-233ENST00000531141 TNP2Q05952 138 aa6.98□□□□□ -1.29
CD44-233ENST00000531141 LCE2CQ5TA81 110 aa6.98□□□□□ -1.29
CD44-233ENST00000531141 ALKBH2Q6NS38 261 aa6.98□□□□□ -1.29
CD44-233ENST00000531141 BNIP3LO60238 219 aa6.97□□□□□ -1.29
CD44-233ENST00000531141 FGFR3P22607 806 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms