RNA–Protein interactions for RNA: ENST00000531140.1

SC5D-207, Transcript of sterol-C5-desaturase, humanhuman

TSL 1 (best)

Gene SC5D, Length 767 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-207ENST00000531140 FANCIQ9NVI1 1328 aa20.41■□□□□ 0.86
SC5D-207ENST00000531140 A0A087WZG4 1122 aa20.4■□□□□ 0.86
SC5D-207ENST00000531140 C9orf131Q5VYM1 1079 aa20.39■□□□□ 0.85
SC5D-207ENST00000531140 ZBTB1Q9Y2K1 713 aa20.38■□□□□ 0.85
SC5D-207ENST00000531140 SALL2Q9Y467 1007 aaPredicted RBP20.38■□□□□ 0.85
SC5D-207ENST00000531140 LAS1LQ9Y4W2 734 aaKnown RBP20.38■□□□□ 0.85
SC5D-207ENST00000531140 N4BP2Q86UW6 1770 aaPredicted RBP20.38■□□□□ 0.85
SC5D-207ENST00000531140 COL15A1P39059 1388 aa20.37■□□□□ 0.85
SC5D-207ENST00000531140 KCNQ3O43525 872 aa20.37■□□□□ 0.85
SC5D-207ENST00000531140 TOMM70O94826 608 aa20.37■□□□□ 0.85
SC5D-207ENST00000531140 CANXP27824 592 aaKnown RBP20.37■□□□□ 0.85
SC5D-207ENST00000531140 CHRNA5P30532 468 aa20.37■□□□□ 0.85
SC5D-207ENST00000531140 NFIXQ14938 502 aa20.37■□□□□ 0.85
SC5D-207ENST00000531140 NPM2Q86SE8 214 aaKnown RBP20.37■□□□□ 0.85
SC5D-207ENST00000531140 MIS18AQ9NYP9 233 aa20.37■□□□□ 0.85
SC5D-207ENST00000531140 RGL2O15211 777 aa20.36■□□□□ 0.85
SC5D-207ENST00000531140 SERPINB2P05120 415 aa20.35■□□□□ 0.85
SC5D-207ENST00000531140 C16orf71Q8IYS4 520 aaPredicted RBP20.35■□□□□ 0.85
SC5D-207ENST00000531140 KIAA1551Q9HCM1 1747 aa20.34■□□□□ 0.85
SC5D-207ENST00000531140 EIF5P55010 431 aaKnown RBP20.34■□□□□ 0.85
SC5D-207ENST00000531140 DUSP27Q5VZP5 1158 aa20.34■□□□□ 0.85
SC5D-207ENST00000531140 KDM2BQ8NHM5 1336 aa20.33■□□□□ 0.85
SC5D-207ENST00000531140 IL6STP40189 918 aaPredicted RBP20.33■□□□□ 0.85
SC5D-207ENST00000531140 APLP1P51693 650 aa20.33■□□□□ 0.85
SC5D-207ENST00000531140 SPINK5Q9NQ38 1064 aaPredicted RBP20.33■□□□□ 0.85
SC5D-207ENST00000531140 RNF181Q9P0P0 153 aa20.33■□□□□ 0.85
SC5D-207ENST00000531140 TTLL6Q8N841 843 aa20.32■□□□□ 0.84
SC5D-207ENST00000531140 TSR2Q969E8 191 aaKnown RBP20.32■□□□□ 0.84
SC5D-207ENST00000531140 BCL2L12Q9HB09 334 aa20.32■□□□□ 0.84
SC5D-207ENST00000531140 PDZRN3Q9UPQ7 1066 aa20.32■□□□□ 0.84
SC5D-207ENST00000531140 H0YIN7 160 aa20.31■□□□□ 0.84
SC5D-207ENST00000531140 TWISTNBQ3B726 338 aaPredicted RBP20.31■□□□□ 0.84
SC5D-207ENST00000531140 CCDC30Q5VVM6 783 aa20.31■□□□□ 0.84
SC5D-207ENST00000531140 NMRK2Q9NPI5 230 aa20.31■□□□□ 0.84
SC5D-207ENST00000531140 BICDL1Q6ZP65 573 aa20.3■□□□□ 0.84
SC5D-207ENST00000531140 C2CD5Q86YS7 1000 aa20.3■□□□□ 0.84
SC5D-207ENST00000531140 RBM46Q8TBY0 533 aaKnown RBP20.3■□□□□ 0.84
SC5D-207ENST00000531140 DBF4Q9UBU7 674 aaPredicted RBP20.3■□□□□ 0.84
SC5D-207ENST00000531140 HDGFL1Q5TGJ6 251 aa20.29■□□□□ 0.84
SC5D-207ENST00000531140 C8orf58Q8NAV2 365 aa20.29■□□□□ 0.84
SC5D-207ENST00000531140 DDX21Q9NR30 783 aaKnown RBP eCLIP20.29■□□□□ 0.84
SC5D-207ENST00000531140 USP16Q9Y5T5 823 aa20.29■□□□□ 0.84
SC5D-207ENST00000531140 VAMP4O75379 141 aa20.28■□□□□ 0.84
SC5D-207ENST00000531140 EXOSC9Q06265 439 aaKnown RBP20.28■□□□□ 0.84
SC5D-207ENST00000531140 CDCA7LQ96GN5 454 aa20.28■□□□□ 0.84
SC5D-207ENST00000531140 ZNF330Q9Y3S2 320 aaPredicted RBP20.28■□□□□ 0.84
SC5D-207ENST00000531140 CEP350Q5VT06 3117 aa20.28■□□□□ 0.84
SC5D-207ENST00000531140 ZC3H4Q9UPT8 1303 aaKnown RBP20.27■□□□□ 0.84
SC5D-207ENST00000531140 PDE6BP35913 854 aa20.27■□□□□ 0.84
SC5D-207ENST00000531140 ALDH1L2Q3SY69 923 aa20.27■□□□□ 0.84
SC5D-207ENST00000531140 HYPKQ9NX55 129 aa20.27■□□□□ 0.84
SC5D-207ENST00000531140 ARFGEF1Q9Y6D6 1849 aa20.27■□□□□ 0.84
SC5D-207ENST00000531140 BRCA1P38398 1863 aaKnown RBP20.26■□□□□ 0.83
SC5D-207ENST00000531140 BCORQ6W2J9 1755 aa20.26■□□□□ 0.83
SC5D-207ENST00000531140 SCN7AQ01118 1682 aa20.26■□□□□ 0.83
SC5D-207ENST00000531140 LMNB1P20700 586 aa20.26■□□□□ 0.83
SC5D-207ENST00000531140 BRPF1P55201 1214 aaPredicted RBP20.26■□□□□ 0.83
SC5D-207ENST00000531140 FSTL1Q12841 308 aa20.26■□□□□ 0.83
SC5D-207ENST00000531140 BRIP1Q9BX63 1249 aa20.26■□□□□ 0.83
SC5D-207ENST00000531140 STK31Q9BXU1 1019 aa20.26■□□□□ 0.83
SC5D-207ENST00000531140 TBC1D2BQ9UPU7 963 aa20.26■□□□□ 0.83
SC5D-207ENST00000531140 NPHP1O15259 732 aa20.25■□□□□ 0.83
SC5D-207ENST00000531140 A1BGP04217 495 aa20.25■□□□□ 0.83
SC5D-207ENST00000531140 TBC1D9BQ66K14 1250 aa20.25■□□□□ 0.83
SC5D-207ENST00000531140 SETDB2Q96T68 719 aa20.25■□□□□ 0.83
SC5D-207ENST00000531140 RRAGCQ9HB90 399 aa20.25■□□□□ 0.83
SC5D-207ENST00000531140 TSPYL6Q8N831 410 aa20.24■□□□□ 0.83
SC5D-207ENST00000531140 ZNF622Q969S3 477 aaKnown RBP eCLIP20.24■□□□□ 0.83
SC5D-207ENST00000531140 PRAMEF22A3QJZ6 481 aa20.23■□□□□ 0.83
SC5D-207ENST00000531140 KRT24Q2M2I5 525 aa20.23■□□□□ 0.83
SC5D-207ENST00000531140 IFFO2Q5TF58 517 aa20.23■□□□□ 0.83
SC5D-207ENST00000531140 CARMIL3Q8ND23 1372 aa20.22■□□□□ 0.83
SC5D-207ENST00000531140 PDIA6Q15084 440 aa20.22■□□□□ 0.83
SC5D-207ENST00000531140 LRP10Q7Z4F1 713 aa20.22■□□□□ 0.83
SC5D-207ENST00000531140 NBPF26B4DH59 902 aa20.21■□□□□ 0.83
SC5D-207ENST00000531140 ERVV-1B6SEH8 477 aa20.21■□□□□ 0.83
SC5D-207ENST00000531140 EIF2S2P20042 333 aaKnown RBP20.21■□□□□ 0.83
SC5D-207ENST00000531140 ST5P78524 1137 aa20.21■□□□□ 0.83
SC5D-207ENST00000531140 RASSF7Q02833 373 aa20.21■□□□□ 0.83
SC5D-207ENST00000531140 NBPF10Q6P3W6 841 aaKnown RBP20.21■□□□□ 0.83
SC5D-207ENST00000531140 CLEC4GQ6UXB4 293 aa20.21■□□□□ 0.83
SC5D-207ENST00000531140 DZIP3Q86Y13 1208 aaKnown RBP20.21■□□□□ 0.83
SC5D-207ENST00000531140 NBPF15Q8N660 670 aa20.21■□□□□ 0.83
SC5D-207ENST00000531140 GLTPD2A6NH11 291 aa20.2■□□□□ 0.82
SC5D-207ENST00000531140 CAMTA2O94983 1202 aa20.2■□□□□ 0.82
SC5D-207ENST00000531140 PRR5LQ6MZQ0 368 aa20.2■□□□□ 0.82
SC5D-207ENST00000531140 CNBD1Q8NA66 436 aa20.2■□□□□ 0.82
SC5D-207ENST00000531140 VEGFAP15692 232 aaPredicted RBP20.19■□□□□ 0.82
SC5D-207ENST00000531140 DPY19L2Q6NUT2 758 aa20.19■□□□□ 0.82
SC5D-207ENST00000531140 DNAJC5GQ8N7S2 189 aa20.19■□□□□ 0.82
SC5D-207ENST00000531140 SMC1BQ8NDV3 1235 aa20.19■□□□□ 0.82
SC5D-207ENST00000531140 CNKSR1Q969H4 720 aa20.19■□□□□ 0.82
SC5D-207ENST00000531140 CHPF2Q9P2E5 772 aa20.19■□□□□ 0.82
SC5D-207ENST00000531140 ZNF652Q9Y2D9 606 aa20.19■□□□□ 0.82
SC5D-207ENST00000531140 IBTKQ9P2D0 1353 aaPredicted RBP20.19■□□□□ 0.82
SC5D-207ENST00000531140 NRXN2Q9P2S2 1712 aa20.19■□□□□ 0.82
SC5D-207ENST00000531140 ANKRD36CQ5JPF3 1778 aa20.18■□□□□ 0.82
SC5D-207ENST00000531140 NUP98P52948 1817 aa20.18■□□□□ 0.82
SC5D-207ENST00000531140 ELL2O00472 640 aaPredicted RBP20.18■□□□□ 0.82
SC5D-207ENST00000531140 DDX58O95786 925 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms