RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 ZNF622Q969S3 477 aaKnown RBP eCLIP14.31□□□□□ -0.12
CAPN1-221ENST00000531068 CFAP44Q96MT7 982 aa14.31□□□□□ -0.12
CAPN1-221ENST00000531068 GPBP1L1Q9HC44 474 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-221ENST00000531068 APAF1O14727 1248 aa14.3□□□□□ -0.12
CAPN1-221ENST00000531068 HLFQ16534 295 aa14.3□□□□□ -0.12
CAPN1-221ENST00000531068 MAP3K15Q6ZN16 1313 aa14.3□□□□□ -0.12
CAPN1-221ENST00000531068 CCDC24Q8N4L8 307 aa14.29□□□□□ -0.12
CAPN1-221ENST00000531068 CNKSR1Q969H4 720 aa14.29□□□□□ -0.12
CAPN1-221ENST00000531068 NYXQ9GZU5 481 aa14.29□□□□□ -0.12
CAPN1-221ENST00000531068 SIPA1L3O60292 1781 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-221ENST00000531068 HOXB7P09629 217 aa14.28□□□□□ -0.12
CAPN1-221ENST00000531068 GOLGB1Q14789 3259 aaKnown RBP14.28□□□□□ -0.12
CAPN1-221ENST00000531068 PDIA6Q15084 440 aa14.28□□□□□ -0.12
CAPN1-221ENST00000531068 C9orf131Q5VYM1 1079 aa14.28□□□□□ -0.12
CAPN1-221ENST00000531068 STYK1Q6J9G0 422 aa14.28□□□□□ -0.12
CAPN1-221ENST00000531068 TTLL7Q6ZT98 887 aa14.28□□□□□ -0.12
CAPN1-221ENST00000531068 ATP10DQ9P241 1426 aa14.28□□□□□ -0.12
CAPN1-221ENST00000531068 SRGNP10124 158 aa14.27□□□□□ -0.13
CAPN1-221ENST00000531068 C1QTNF8P60827 252 aa14.27□□□□□ -0.13
CAPN1-221ENST00000531068 GNAI1P63096 354 aa14.27□□□□□ -0.13
CAPN1-221ENST00000531068 GIGYF2Q6Y7W6 1299 aaKnown RBP14.27□□□□□ -0.13
CAPN1-221ENST00000531068 MASTLQ96GX5 879 aa14.27□□□□□ -0.13
CAPN1-221ENST00000531068 CHMP4AQ9BY43 222 aa14.27□□□□□ -0.13
CAPN1-221ENST00000531068 ZBTB3Q9H5J0 574 aa14.27□□□□□ -0.13
CAPN1-221ENST00000531068 ADCY9O60503 1353 aa14.26□□□□□ -0.13
CAPN1-221ENST00000531068 KLRG2A4D1S0 409 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-221ENST00000531068 FAM177BA6PVY3 158 aa14.26□□□□□ -0.13
CAPN1-221ENST00000531068 NPR1P16066 1061 aa14.26□□□□□ -0.13
CAPN1-221ENST00000531068 ZNF526Q8TF50 670 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-221ENST00000531068 MRS2Q9HD23 443 aa14.26□□□□□ -0.13
CAPN1-221ENST00000531068 DDX21Q9NR30 783 aaKnown RBP eCLIP14.26□□□□□ -0.13
CAPN1-221ENST00000531068 IFT57Q9NWB7 429 aa14.26□□□□□ -0.13
CAPN1-221ENST00000531068 ZNF853P0CG23 659 aa14.25□□□□□ -0.13
CAPN1-221ENST00000531068 PARP10Q53GL7 1025 aa14.25□□□□□ -0.13
CAPN1-221ENST00000531068 SOGA3Q5TF21 947 aa14.25□□□□□ -0.13
CAPN1-221ENST00000531068 HDGFL1Q5TGJ6 251 aa14.25□□□□□ -0.13
CAPN1-221ENST00000531068 COPS6Q7L5N1 327 aa14.25□□□□□ -0.13
CAPN1-221ENST00000531068 PPP1R42Q7Z4L9 355 aa14.25□□□□□ -0.13
CAPN1-221ENST00000531068 MBIPQ9NS73 344 aa14.25□□□□□ -0.13
CAPN1-221ENST00000531068 RNF181Q9P0P0 153 aa14.25□□□□□ -0.13
CAPN1-221ENST00000531068 LMNB1P20700 586 aa14.24□□□□□ -0.13
CAPN1-221ENST00000531068 ALDH1B1P30837 517 aa14.24□□□□□ -0.13
CAPN1-221ENST00000531068 NCBP3Q53F19 620 aaKnown RBP14.24□□□□□ -0.13
CAPN1-221ENST00000531068 HSP90AB3PQ58FF7 597 aa14.24□□□□□ -0.13
CAPN1-221ENST00000531068 DUSP27Q5VZP5 1158 aa14.24□□□□□ -0.13
CAPN1-221ENST00000531068 LRP10Q7Z4F1 713 aa14.24□□□□□ -0.13
CAPN1-221ENST00000531068 ZNF34Q8IZ26 560 aa14.24□□□□□ -0.13
CAPN1-221ENST00000531068 NECTIN2Q92692 538 aa14.24□□□□□ -0.13
CAPN1-221ENST00000531068 DBF4Q9UBU7 674 aaPredicted RBP14.24□□□□□ -0.13
CAPN1-221ENST00000531068 KIF13BQ9NQT8 1826 aa14.23□□□□□ -0.13
CAPN1-221ENST00000531068 C21orf2O43822 256 aa14.23□□□□□ -0.13
CAPN1-221ENST00000531068 GPTP24298 496 aa14.23□□□□□ -0.13
CAPN1-221ENST00000531068 AIMP1Q12904 312 aaKnown RBP14.23□□□□□ -0.13
CAPN1-221ENST00000531068 CCDC27Q2M243 656 aa14.23□□□□□ -0.13
CAPN1-221ENST00000531068 KRT24Q2M2I5 525 aa14.23□□□□□ -0.13
CAPN1-221ENST00000531068 PROSER3Q2NL68 480 aa14.23□□□□□ -0.13
CAPN1-221ENST00000531068 XAGE3Q8WTP9 111 aa14.23□□□□□ -0.13
CAPN1-221ENST00000531068 HYPKQ9NX55 129 aa14.23□□□□□ -0.13
CAPN1-221ENST00000531068 ANXA1P04083 346 aa14.22□□□□□ -0.13
CAPN1-221ENST00000531068 SUSD4Q5VX71 490 aa14.22□□□□□ -0.13
CAPN1-221ENST00000531068 PRPF40BQ6NWY9 871 aaKnown RBP14.22□□□□□ -0.13
CAPN1-221ENST00000531068 ZNF219Q9P2Y4 722 aaPredicted RBP14.22□□□□□ -0.13
CAPN1-221ENST00000531068 ZC3H4Q9UPT8 1303 aaKnown RBP14.21□□□□□ -0.13
CAPN1-221ENST00000531068 NUTM1Q86Y26 1132 aa14.21□□□□□ -0.13
CAPN1-221ENST00000531068 UTP14AQ9BVJ6 771 aaKnown RBP14.21□□□□□ -0.13
CAPN1-221ENST00000531068 CHPF2Q9P2E5 772 aa14.21□□□□□ -0.13
CAPN1-221ENST00000531068 KDM2BQ8NHM5 1336 aa14.2□□□□□ -0.14
CAPN1-221ENST00000531068 CHD4Q14839 1912 aa14.2□□□□□ -0.14
CAPN1-221ENST00000531068 RASSF7Q02833 373 aa14.2□□□□□ -0.14
CAPN1-221ENST00000531068 TCIRG1Q13488 830 aa14.2□□□□□ -0.14
CAPN1-221ENST00000531068 CRY2Q49AN0 593 aa14.2□□□□□ -0.14
CAPN1-221ENST00000531068 ERFEQ4G0M1 354 aa14.2□□□□□ -0.14
CAPN1-221ENST00000531068 ANKRD13DQ6ZTN6 518 aa14.2□□□□□ -0.14
CAPN1-221ENST00000531068 RPGRQ92834 1020 aaKnown RBP14.2□□□□□ -0.14
CAPN1-221ENST00000531068 NLRP3Q96P20 1036 aa14.2□□□□□ -0.14
CAPN1-221ENST00000531068 IBTKQ9P2D0 1353 aaPredicted RBP14.2□□□□□ -0.14
CAPN1-221ENST00000531068 VIRMAQ69YN4 1812 aaKnown RBP14.2□□□□□ -0.14
CAPN1-221ENST00000531068 RNF123Q5XPI4 1314 aa14.19□□□□□ -0.14
CAPN1-221ENST00000531068 UBN2Q6ZU65 1347 aa14.19□□□□□ -0.14
CAPN1-221ENST00000531068 LTBP3Q9NS15 1303 aa14.19□□□□□ -0.14
CAPN1-221ENST00000531068 NRXN2Q9P2S2 1712 aa14.19□□□□□ -0.14
CAPN1-221ENST00000531068 NFKBIEO00221 500 aa14.19□□□□□ -0.14
CAPN1-221ENST00000531068 SLC10A5Q5PT55 438 aa14.19□□□□□ -0.14
CAPN1-221ENST00000531068 WWC1Q8IX03 1113 aa14.19□□□□□ -0.14
CAPN1-221ENST00000531068 RTKN2Q8IZC4 609 aa14.19□□□□□ -0.14
CAPN1-221ENST00000531068 PLBD2Q8NHP8 589 aa14.19□□□□□ -0.14
CAPN1-221ENST00000531068 C7orf43Q8WVR3 580 aa14.19□□□□□ -0.14
CAPN1-221ENST00000531068 TAOK3Q9H2K8 898 aa14.19□□□□□ -0.14
CAPN1-221ENST00000531068 ELL2O00472 640 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-221ENST00000531068 KIF3CO14782 793 aa14.18□□□□□ -0.14
CAPN1-221ENST00000531068 NTSR2O95665 410 aa14.18□□□□□ -0.14
CAPN1-221ENST00000531068 HOXA10P31260 410 aaPredicted RBP14.18□□□□□ -0.14
CAPN1-221ENST00000531068 CCDC93Q567U6 631 aa14.18□□□□□ -0.14
CAPN1-221ENST00000531068 DPY19L2Q6NUT2 758 aa14.18□□□□□ -0.14
CAPN1-221ENST00000531068 RBM17Q96I25 401 aaKnown RBP14.18□□□□□ -0.14
CAPN1-221ENST00000531068 SCN7AQ01118 1682 aa14.17□□□□□ -0.14
CAPN1-221ENST00000531068 N4BP2Q86UW6 1770 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-221ENST00000531068 GRIPAP1Q4V328 841 aa14.17□□□□□ -0.14
CAPN1-221ENST00000531068 CCDC30Q5VVM6 783 aa14.17□□□□□ -0.14
CAPN1-221ENST00000531068 CC2D2BQ6DHV5 1058 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms