RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 BCS1LQ9Y276 419 aa24.78■■□□□ 1.56
UBXN1-211ENST00000531056 EIF2S2P20042 333 aaKnown RBP24.77■■□□□ 1.56
UBXN1-211ENST00000531056 HLFQ16534 295 aa24.77■■□□□ 1.56
UBXN1-211ENST00000531056 TTLL7Q6ZT98 887 aa24.77■■□□□ 1.56
UBXN1-211ENST00000531056 NGEFQ8N5V2 710 aa24.77■■□□□ 1.56
UBXN1-211ENST00000531056 MBIPQ9NS73 344 aa24.77■■□□□ 1.56
UBXN1-211ENST00000531056 IFT57Q9NWB7 429 aa24.77■■□□□ 1.56
UBXN1-211ENST00000531056 PIM2Q9P1W9 311 aa24.77■■□□□ 1.56
UBXN1-211ENST00000531056 CALD1Q05682 793 aaKnown RBP24.76■■□□□ 1.55
UBXN1-211ENST00000531056 MAP3K15Q6ZN16 1313 aa24.76■■□□□ 1.55
UBXN1-211ENST00000531056 ERVV-1B6SEH8 477 aa24.75■■□□□ 1.55
UBXN1-211ENST00000531056 PROSER3Q2NL68 480 aa24.75■■□□□ 1.55
UBXN1-211ENST00000531056 ATP10DQ9P241 1426 aa24.75■■□□□ 1.55
UBXN1-211ENST00000531056 HOXB7P09629 217 aa24.74■■□□□ 1.55
UBXN1-211ENST00000531056 CCDC27Q2M243 656 aa24.74■■□□□ 1.55
UBXN1-211ENST00000531056 KIF6Q6ZMV9 814 aa24.74■■□□□ 1.55
UBXN1-211ENST00000531056 CNBD1Q8NA66 436 aa24.74■■□□□ 1.55
UBXN1-211ENST00000531056 GNAI1P63096 354 aa24.73■■□□□ 1.55
UBXN1-211ENST00000531056 ZNF784Q8NCA9 323 aaPredicted RBP24.73■■□□□ 1.55
UBXN1-211ENST00000531056 BRIP1Q9BX63 1249 aa24.73■■□□□ 1.55
UBXN1-211ENST00000531056 NIP7Q9Y221 180 aaKnown RBP eCLIP24.73■■□□□ 1.55
UBXN1-211ENST00000531056 ANXA1P04083 346 aa24.72■■□□□ 1.55
UBXN1-211ENST00000531056 DALRD3Q5D0E6 543 aaKnown RBP24.72■■□□□ 1.55
UBXN1-211ENST00000531056 CCDC24Q8N4L8 307 aa24.72■■□□□ 1.55
UBXN1-211ENST00000531056 NECTIN2Q92692 538 aa24.72■■□□□ 1.55
UBXN1-211ENST00000531056 ADCY9O60503 1353 aa24.71■■□□□ 1.55
UBXN1-211ENST00000531056 NCBP3Q53F19 620 aaKnown RBP24.71■■□□□ 1.55
UBXN1-211ENST00000531056 NBPF5PQ86XG9 351 aaPredicted RBP24.71■■□□□ 1.55
UBXN1-211ENST00000531056 C2CD5Q86YS7 1000 aa24.71■■□□□ 1.55
UBXN1-211ENST00000531056 ANKRD36CQ5JPF3 1778 aa24.7■■□□□ 1.55
UBXN1-211ENST00000531056 SENP3-EIF4A1A0A087X0R7 540 aa24.7■■□□□ 1.54
UBXN1-211ENST00000531056 ST5P78524 1137 aa24.7■■□□□ 1.54
UBXN1-211ENST00000531056 DUSP27Q5VZP5 1158 aa24.7■■□□□ 1.54
UBXN1-211ENST00000531056 ZBTB3Q9H5J0 574 aa24.7■■□□□ 1.54
UBXN1-211ENST00000531056 H0YIN7 160 aa24.69■■□□□ 1.54
UBXN1-211ENST00000531056 PDE6BP35913 854 aa24.69■■□□□ 1.54
UBXN1-211ENST00000531056 HDGFL1Q5TGJ6 251 aa24.69■■□□□ 1.54
UBXN1-211ENST00000531056 WWC1Q8IX03 1113 aa24.69■■□□□ 1.54
UBXN1-211ENST00000531056 DDX21Q9NR30 783 aaKnown RBP eCLIP24.69■■□□□ 1.54
UBXN1-211ENST00000531056 PDZRN3Q9UPQ7 1066 aa24.69■■□□□ 1.54
UBXN1-211ENST00000531056 ARFGEF2Q9Y6D5 1785 aa24.69■■□□□ 1.54
UBXN1-211ENST00000531056 CHPF2Q9P2E5 772 aa24.68■■□□□ 1.54
UBXN1-211ENST00000531056 TNRC6CQ9HCJ0 1690 aaKnown RBP24.68■■□□□ 1.54
UBXN1-211ENST00000531056 UBN2Q6ZU65 1347 aa24.67■■□□□ 1.54
UBXN1-211ENST00000531056 NPHP1O15259 732 aa24.67■■□□□ 1.54
UBXN1-211ENST00000531056 GIGYF2Q6Y7W6 1299 aaKnown RBP24.67■■□□□ 1.54
UBXN1-211ENST00000531056 IBTKQ9P2D0 1353 aaPredicted RBP24.67■■□□□ 1.54
UBXN1-211ENST00000531056 TPTE2Q6XPS3 522 aa24.66■■□□□ 1.54
UBXN1-211ENST00000531056 CACNA1SQ13698 1873 aa24.66■■□□□ 1.54
UBXN1-211ENST00000531056 ARHGAP27Q6ZUM4 889 aa24.65■■□□□ 1.54
UBXN1-211ENST00000531056 COPS6Q7L5N1 327 aa24.65■■□□□ 1.54
UBXN1-211ENST00000531056 ZNF34Q8IZ26 560 aa24.65■■□□□ 1.54
UBXN1-211ENST00000531056 TTLL6Q8N841 843 aa24.65■■□□□ 1.54
UBXN1-211ENST00000531056 XAGE3Q8WTP9 111 aa24.65■■□□□ 1.54
UBXN1-211ENST00000531056 FAM177BA6PVY3 158 aa24.64■■□□□ 1.54
UBXN1-211ENST00000531056 FAM9BQ8IZU0 186 aa24.64■■□□□ 1.54
UBXN1-211ENST00000531056 IL16Q14005 1332 aa24.63■■□□□ 1.53
UBXN1-211ENST00000531056 GPTP24298 496 aa24.63■■□□□ 1.53
UBXN1-211ENST00000531056 C8orf58Q8NAV2 365 aa24.63■■□□□ 1.53
UBXN1-211ENST00000531056 DBF4Q9UBU7 674 aaPredicted RBP24.63■■□□□ 1.53
UBXN1-211ENST00000531056 ABCC12Q96J65 1359 aa24.63■■□□□ 1.53
UBXN1-211ENST00000531056 SBF1O95248 1867 aa24.62■■□□□ 1.53
UBXN1-211ENST00000531056 KLRG2A4D1S0 409 aaPredicted RBP24.62■■□□□ 1.53
UBXN1-211ENST00000531056 SRGNP10124 158 aa24.62■■□□□ 1.53
UBXN1-211ENST00000531056 AIMP1Q12904 312 aaKnown RBP24.62■■□□□ 1.53
UBXN1-211ENST00000531056 NYXQ9GZU5 481 aa24.62■■□□□ 1.53
UBXN1-211ENST00000531056 RIC1Q4ADV7 1423 aa24.61■■□□□ 1.53
UBXN1-211ENST00000531056 SLX4Q8IY92 1834 aa24.61■■□□□ 1.53
UBXN1-211ENST00000531056 STYK1Q6J9G0 422 aa24.61■■□□□ 1.53
UBXN1-211ENST00000531056 TSR2Q969E8 191 aaKnown RBP24.61■■□□□ 1.53
UBXN1-211ENST00000531056 ZNF622Q969S3 477 aaKnown RBP eCLIP24.61■■□□□ 1.53
UBXN1-211ENST00000531056 ELL2O00472 640 aaPredicted RBP24.6■■□□□ 1.53
UBXN1-211ENST00000531056 SUSD4Q5VX71 490 aa24.6■■□□□ 1.53
UBXN1-211ENST00000531056 MASTLQ96GX5 879 aa24.6■■□□□ 1.53
UBXN1-211ENST00000531056 NTSR2O95665 410 aa24.59■■□□□ 1.53
UBXN1-211ENST00000531056 NUTM1Q86Y26 1132 aa24.59■■□□□ 1.53
UBXN1-211ENST00000531056 HYPKQ9NX55 129 aa24.59■■□□□ 1.53
UBXN1-211ENST00000531056 FER1L6Q2WGJ9 1857 aa24.58■■□□□ 1.53
UBXN1-211ENST00000531056 ERFEQ4G0M1 354 aa24.58■■□□□ 1.53
UBXN1-211ENST00000531056 PARP10Q53GL7 1025 aa24.58■■□□□ 1.53
UBXN1-211ENST00000531056 TSPYL6Q8N831 410 aa24.58■■□□□ 1.53
UBXN1-211ENST00000531056 GTF2E1P29083 439 aaPredicted RBP24.57■■□□□ 1.52
UBXN1-211ENST00000531056 HSP90AB3PQ58FF7 597 aa24.57■■□□□ 1.52
UBXN1-211ENST00000531056 WDR63Q8IWG1 891 aa24.57■■□□□ 1.52
UBXN1-211ENST00000531056 CNKSR1Q969H4 720 aa24.57■■□□□ 1.52
UBXN1-211ENST00000531056 SALL2Q9Y467 1007 aaPredicted RBP24.57■■□□□ 1.52
UBXN1-211ENST00000531056 NPR1P16066 1061 aa24.56■■□□□ 1.52
UBXN1-211ENST00000531056 PPP1R42Q7Z4L9 355 aa24.56■■□□□ 1.52
UBXN1-211ENST00000531056 PLBD2Q8NHP8 589 aa24.56■■□□□ 1.52
UBXN1-211ENST00000531056 RASSF7Q02833 373 aa24.55■■□□□ 1.52
UBXN1-211ENST00000531056 TCIRG1Q13488 830 aa24.55■■□□□ 1.52
UBXN1-211ENST00000531056 PRPF40BQ6NWY9 871 aaKnown RBP24.55■■□□□ 1.52
UBXN1-211ENST00000531056 FANCIQ9NVI1 1328 aa24.55■■□□□ 1.52
UBXN1-211ENST00000531056 CRY2Q49AN0 593 aa24.54■■□□□ 1.52
UBXN1-211ENST00000531056 C9orf131Q5VYM1 1079 aa24.54■■□□□ 1.52
UBXN1-211ENST00000531056 ANKRD13DQ6ZTN6 518 aa24.54■■□□□ 1.52
UBXN1-211ENST00000531056 NLRP10Q86W26 655 aa24.54■■□□□ 1.52
UBXN1-211ENST00000531056 LAMB2P55268 1798 aa24.54■■□□□ 1.52
UBXN1-211ENST00000531056 C21orf2O43822 256 aa24.53■■□□□ 1.52
UBXN1-211ENST00000531056 CCDC30Q5VVM6 783 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 217.9 ms