RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 CCDC27Q2M243 656 aa24.37■■□□□ 1.49
GMDS-208ENST00000530927 DUSP27Q5VZP5 1158 aa24.36■■□□□ 1.49
GMDS-208ENST00000530927 KCNA3P22001 575 aa24.35■■□□□ 1.49
GMDS-208ENST00000530927 CALD1Q05682 793 aaKnown RBP24.35■■□□□ 1.49
GMDS-208ENST00000530927 C8orf58Q8NAV2 365 aa24.35■■□□□ 1.49
GMDS-208ENST00000530927 ZBTB3Q9H5J0 574 aa24.35■■□□□ 1.49
GMDS-208ENST00000530927 TGFB2P61812 414 aa24.35■■□□□ 1.49
GMDS-208ENST00000530927 SETDB2Q96T68 719 aa24.35■■□□□ 1.49
GMDS-208ENST00000530927 CHPF2Q9P2E5 772 aa24.35■■□□□ 1.49
GMDS-208ENST00000530927 ERBB4Q15303 1308 aa24.34■■□□□ 1.49
GMDS-208ENST00000530927 BRCA1P38398 1863 aaKnown RBP24.34■■□□□ 1.49
GMDS-208ENST00000530927 HDGFL1Q5TGJ6 251 aa24.34■■□□□ 1.49
GMDS-208ENST00000530927 ANKRD31Q8N7Z5 1873 aa24.34■■□□□ 1.49
GMDS-208ENST00000530927 MAP3K15Q6ZN16 1313 aa24.33■■□□□ 1.49
GMDS-208ENST00000530927 NUP98P52948 1817 aa24.33■■□□□ 1.49
GMDS-208ENST00000530927 FAM177BA6PVY3 158 aa24.33■■□□□ 1.49
GMDS-208ENST00000530927 PRR5LQ6MZQ0 368 aa24.33■■□□□ 1.49
GMDS-208ENST00000530927 TSPYL6Q8N831 410 aa24.33■■□□□ 1.49
GMDS-208ENST00000530927 AIMP1Q12904 312 aaKnown RBP24.32■■□□□ 1.48
GMDS-208ENST00000530927 CLEC4GQ6UXB4 293 aa24.32■■□□□ 1.48
GMDS-208ENST00000530927 KIF6Q6ZMV9 814 aa24.32■■□□□ 1.48
GMDS-208ENST00000530927 NIP7Q9Y221 180 aaKnown RBP eCLIP24.32■■□□□ 1.48
GMDS-208ENST00000530927 DIEXFQ68CQ4 756 aaKnown RBP24.31■■□□□ 1.48
GMDS-208ENST00000530927 SPINK5Q9NQ38 1064 aaPredicted RBP24.31■■□□□ 1.48
GMDS-208ENST00000530927 ZNF652Q9Y2D9 606 aa24.31■■□□□ 1.48
GMDS-208ENST00000530927 COPS6Q7L5N1 327 aa24.3■■□□□ 1.48
GMDS-208ENST00000530927 XAGE3Q8WTP9 111 aa24.3■■□□□ 1.48
GMDS-208ENST00000530927 BCS1LQ9Y276 419 aa24.3■■□□□ 1.48
GMDS-208ENST00000530927 GPTP24298 496 aa24.29■■□□□ 1.48
GMDS-208ENST00000530927 DDX21Q9NR30 783 aaKnown RBP eCLIP24.29■■□□□ 1.48
GMDS-208ENST00000530927 COL11A2P13942 1736 aaPredicted RBP24.28■■□□□ 1.48
GMDS-208ENST00000530927 ERVV-1B6SEH8 477 aa24.28■■□□□ 1.48
GMDS-208ENST00000530927 HOXB7P09629 217 aa24.28■■□□□ 1.48
GMDS-208ENST00000530927 YY1P25490 414 aa24.28■■□□□ 1.48
GMDS-208ENST00000530927 CNBD1Q8NA66 436 aa24.28■■□□□ 1.48
GMDS-208ENST00000530927 UBN2Q6ZU65 1347 aa24.28■■□□□ 1.48
GMDS-208ENST00000530927 NBPF5PQ86XG9 351 aaPredicted RBP24.27■■□□□ 1.48
GMDS-208ENST00000530927 MIER1Q8N108 512 aa24.27■■□□□ 1.48
GMDS-208ENST00000530927 NCBP3Q53F19 620 aaKnown RBP24.27■■□□□ 1.48
GMDS-208ENST00000530927 FANCIQ9NVI1 1328 aa24.26■■□□□ 1.47
GMDS-208ENST00000530927 CCER2I3L3R5 266 aa24.26■■□□□ 1.47
GMDS-208ENST00000530927 TCERG1O14776 1098 aaKnown RBP24.26■■□□□ 1.47
GMDS-208ENST00000530927 NPHP1O15259 732 aa24.26■■□□□ 1.47
GMDS-208ENST00000530927 C2CD5Q86YS7 1000 aa24.26■■□□□ 1.47
GMDS-208ENST00000530927 ZNF428Q96B54 188 aa24.26■■□□□ 1.47
GMDS-208ENST00000530927 DLEC1Q9Y238 1755 aa24.26■■□□□ 1.47
GMDS-208ENST00000530927 IL16Q14005 1332 aa24.25■■□□□ 1.47
GMDS-208ENST00000530927 CHD4Q14839 1912 aa24.25■■□□□ 1.47
GMDS-208ENST00000530927 ATP10DQ9P241 1426 aa24.25■■□□□ 1.47
GMDS-208ENST00000530927 GRIN3BO60391 1043 aa24.24■■□□□ 1.47
GMDS-208ENST00000530927 GIGYF2Q6Y7W6 1299 aaKnown RBP24.24■■□□□ 1.47
GMDS-208ENST00000530927 WDR63Q8IWG1 891 aa24.24■■□□□ 1.47
GMDS-208ENST00000530927 PIM2Q9P1W9 311 aa24.24■■□□□ 1.47
GMDS-208ENST00000530927 DBF4Q9UBU7 674 aaPredicted RBP24.24■■□□□ 1.47
GMDS-208ENST00000530927 RGL2O15211 777 aa24.23■■□□□ 1.47
GMDS-208ENST00000530927 NUTM1Q86Y26 1132 aa24.23■■□□□ 1.47
GMDS-208ENST00000530927 BRIP1Q9BX63 1249 aa24.23■■□□□ 1.47
GMDS-208ENST00000530927 PHAXQ9H814 394 aaKnown RBP24.23■■□□□ 1.47
GMDS-208ENST00000530927 TNRC6CQ9HCJ0 1690 aaKnown RBP24.23■■□□□ 1.47
GMDS-208ENST00000530927 ST5P78524 1137 aa24.22■■□□□ 1.47
GMDS-208ENST00000530927 SUSD4Q5VX71 490 aa24.22■■□□□ 1.47
GMDS-208ENST00000530927 ZNF34Q8IZ26 560 aa24.22■■□□□ 1.47
GMDS-208ENST00000530927 ABCC12Q96J65 1359 aa24.22■■□□□ 1.47
GMDS-208ENST00000530927 ZNF521Q96K83 1311 aa24.21■■□□□ 1.47
GMDS-208ENST00000530927 ANKRD36CQ5JPF3 1778 aa24.2■■□□□ 1.47
GMDS-208ENST00000530927 H0YIN7 160 aa24.2■■□□□ 1.46
GMDS-208ENST00000530927 TWISTNBQ3B726 338 aaPredicted RBP24.2■■□□□ 1.46
GMDS-208ENST00000530927 DALRD3Q5D0E6 543 aaKnown RBP24.2■■□□□ 1.46
GMDS-208ENST00000530927 ARFGEF1Q9Y6D6 1849 aa24.2■■□□□ 1.46
GMDS-208ENST00000530927 ERFEQ4G0M1 354 aa24.19■■□□□ 1.46
GMDS-208ENST00000530927 TPTE2Q6XPS3 522 aa24.19■■□□□ 1.46
GMDS-208ENST00000530927 PDE6BP35913 854 aa24.18■■□□□ 1.46
GMDS-208ENST00000530927 EXOSC9Q06265 439 aaKnown RBP24.18■■□□□ 1.46
GMDS-208ENST00000530927 ZNF622Q969S3 477 aaKnown RBP eCLIP24.18■■□□□ 1.46
GMDS-208ENST00000530927 HYPKQ9NX55 129 aa24.18■■□□□ 1.46
GMDS-208ENST00000530927 ARFGEF2Q9Y6D5 1785 aa24.18■■□□□ 1.46
GMDS-208ENST00000530927 NTSR2O95665 410 aa24.18■■□□□ 1.46
GMDS-208ENST00000530927 CACNA1SQ13698 1873 aa24.17■■□□□ 1.46
GMDS-208ENST00000530927 ANKRD13DQ6ZTN6 518 aa24.17■■□□□ 1.46
GMDS-208ENST00000530927 ARHGAP27Q6ZUM4 889 aa24.17■■□□□ 1.46
GMDS-208ENST00000530927 GTF2E1P29083 439 aaPredicted RBP24.16■■□□□ 1.46
GMDS-208ENST00000530927 CCDC30Q5VVM6 783 aa24.16■■□□□ 1.46
GMDS-208ENST00000530927 SYNE4Q8N205 404 aa24.16■■□□□ 1.46
GMDS-208ENST00000530927 PLBD2Q8NHP8 589 aa24.16■■□□□ 1.46
GMDS-208ENST00000530927 ZNF219Q9P2Y4 722 aaPredicted RBP24.16■■□□□ 1.46
GMDS-208ENST00000530927 ATP5J2-PTCD1G3V325 749 aa24.15■■□□□ 1.46
GMDS-208ENST00000530927 SRGNP10124 158 aa24.15■■□□□ 1.46
GMDS-208ENST00000530927 TCIRG1Q13488 830 aa24.15■■□□□ 1.46
GMDS-208ENST00000530927 TTLL6Q8N841 843 aa24.15■■□□□ 1.46
GMDS-208ENST00000530927 GOLGA2Q08379 1002 aa24.14■■□□□ 1.45
GMDS-208ENST00000530927 C3orf67Q6ZVT6 689 aa24.14■■□□□ 1.45
GMDS-208ENST00000530927 G2E3Q7L622 706 aa24.14■■□□□ 1.45
GMDS-208ENST00000530927 NLRP10Q86W26 655 aa24.14■■□□□ 1.45
GMDS-208ENST00000530927 NYXQ9GZU5 481 aa24.14■■□□□ 1.45
GMDS-208ENST00000530927 SLX4Q8IY92 1834 aa24.13■■□□□ 1.45
GMDS-208ENST00000530927 VAMP4O75379 141 aa24.12■■□□□ 1.45
GMDS-208ENST00000530927 IBTKQ9P2D0 1353 aaPredicted RBP24.12■■□□□ 1.45
GMDS-208ENST00000530927 PARP10Q53GL7 1025 aa24.11■■□□□ 1.45
GMDS-208ENST00000530927 UTP14AQ9BVJ6 771 aaKnown RBP24.11■■□□□ 1.45
GMDS-208ENST00000530927 KLRG2A4D1S0 409 aaPredicted RBP24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms