RNA–Protein interactions for RNA: ENST00000530721.5

RPS3-216, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-216ENST00000530721 EIF4A1P60842 406 aaKnown RBP16.91■□□□□ 0.3
RPS3-216ENST00000530721 KDM2BQ8NHM5 1336 aa16.91■□□□□ 0.3
RPS3-216ENST00000530721 MYBBP1AQ9BQG0 1328 aaKnown RBP16.91■□□□□ 0.3
RPS3-216ENST00000530721 ZC3H4Q9UPT8 1303 aaKnown RBP16.91■□□□□ 0.3
RPS3-216ENST00000530721 COL11A2P13942 1736 aaPredicted RBP16.9■□□□□ 0.3
RPS3-216ENST00000530721 NBPF5PQ86XG9 351 aaPredicted RBP16.9■□□□□ 0.3
RPS3-216ENST00000530721 CNKSR1Q969H4 720 aa16.89■□□□□ 0.29
RPS3-216ENST00000530721 NIP7Q9Y221 180 aaKnown RBP eCLIP16.89■□□□□ 0.299e-40■■■■□ 25.2
RPS3-216ENST00000530721 NFKBIEO00221 500 aa16.88■□□□□ 0.29
RPS3-216ENST00000530721 SRGNP10124 158 aa16.88■□□□□ 0.29
RPS3-216ENST00000530721 RIPK4P57078 832 aa16.88■□□□□ 0.29
RPS3-216ENST00000530721 STYK1Q6J9G0 422 aa16.88■□□□□ 0.29
RPS3-216ENST00000530721 C21orf2O43822 256 aa16.87■□□□□ 0.29
RPS3-216ENST00000530721 PRELPP51888 382 aa16.87■□□□□ 0.29
RPS3-216ENST00000530721 LMOD3Q0VAK6 560 aa16.87■□□□□ 0.29
RPS3-216ENST00000530721 TPTE2Q6XPS3 522 aa16.87■□□□□ 0.29
RPS3-216ENST00000530721 C16orf71Q8IYS4 520 aaPredicted RBP16.87■□□□□ 0.29
RPS3-216ENST00000530721 MASTLQ96GX5 879 aa16.87■□□□□ 0.29
RPS3-216ENST00000530721 ERVV-1B6SEH8 477 aa16.86■□□□□ 0.29
RPS3-216ENST00000530721 TMPOP42166 694 aaKnown RBP16.86■□□□□ 0.29
RPS3-216ENST00000530721 HLFQ16534 295 aa16.86■□□□□ 0.29
RPS3-216ENST00000530721 TSPYL4Q9UJ04 414 aa16.86■□□□□ 0.29
RPS3-216ENST00000530721 TNRC6CQ9HCJ0 1690 aaKnown RBP16.85■□□□□ 0.29
RPS3-216ENST00000530721 PRPF40BQ6NWY9 871 aaKnown RBP16.85■□□□□ 0.29
RPS3-216ENST00000530721 NGEFQ8N5V2 710 aa16.85■□□□□ 0.29
RPS3-216ENST00000530721 RBM46Q8TBY0 533 aaKnown RBP16.85■□□□□ 0.29
RPS3-216ENST00000530721 BABAM1Q9NWV8 329 aa16.85■□□□□ 0.29
RPS3-216ENST00000530721 ZNF219Q9P2Y4 722 aaPredicted RBP16.85■□□□□ 0.29
RPS3-216ENST00000530721 RRP7AQ9Y3A4 280 aaKnown RBP16.85■□□□□ 0.29
RPS3-216ENST00000530721 FER1L6Q2WGJ9 1857 aa16.84■□□□□ 0.29
RPS3-216ENST00000530721 CCDC88AQ3V6T2 1871 aa16.84■□□□□ 0.29
RPS3-216ENST00000530721 KLRG2A4D1S0 409 aaPredicted RBP16.84■□□□□ 0.29
RPS3-216ENST00000530721 MYL6BP14649 208 aa16.84■□□□□ 0.29
RPS3-216ENST00000530721 SOGA3Q5TF21 947 aa16.84■□□□□ 0.29
RPS3-216ENST00000530721 KIF6Q6ZMV9 814 aa16.84■□□□□ 0.29
RPS3-216ENST00000530721 RRAGCQ9HB90 399 aa16.84■□□□□ 0.29
RPS3-216ENST00000530721 ERBB4Q15303 1308 aa16.84■□□□□ 0.29
RPS3-216ENST00000530721 MAP3K15Q6ZN16 1313 aa16.84■□□□□ 0.29
RPS3-216ENST00000530721 LTBP3Q9NS15 1303 aa16.84■□□□□ 0.29
RPS3-216ENST00000530721 ARFGEF2Q9Y6D5 1785 aa16.84■□□□□ 0.29
RPS3-216ENST00000530721 SLX4Q8IY92 1834 aa16.84■□□□□ 0.29
RPS3-216ENST00000530721 GLTPD2A6NH11 291 aa16.83■□□□□ 0.28
RPS3-216ENST00000530721 FAM177BA6PVY3 158 aa16.83■□□□□ 0.28
RPS3-216ENST00000530721 NPR1P16066 1061 aa16.83■□□□□ 0.28
RPS3-216ENST00000530721 WDR43Q15061 677 aaKnown RBP eCLIP16.83■□□□□ 0.28
RPS3-216ENST00000530721 TIAM2Q8IVF5 1701 aa16.83■□□□□ 0.28
RPS3-216ENST00000530721 TAOK3Q9H2K8 898 aa16.83■□□□□ 0.28
RPS3-216ENST00000530721 CACNA1SQ13698 1873 aa16.82■□□□□ 0.28
RPS3-216ENST00000530721 GTF2E1P29083 439 aaPredicted RBP16.82■□□□□ 0.28
RPS3-216ENST00000530721 APLP1P51693 650 aa16.82■□□□□ 0.28
RPS3-216ENST00000530721 TTLL7Q6ZT98 887 aa16.82■□□□□ 0.28
RPS3-216ENST00000530721 CCDC146Q8IYE0 955 aa16.82■□□□□ 0.28
RPS3-216ENST00000530721 NYXQ9GZU5 481 aa16.82■□□□□ 0.28
RPS3-216ENST00000530721 NUP98P52948 1817 aa16.82■□□□□ 0.28
RPS3-216ENST00000530721 FSTL1Q12841 308 aa16.81■□□□□ 0.28
RPS3-216ENST00000530721 ERFEQ4G0M1 354 aa16.81■□□□□ 0.28
RPS3-216ENST00000530721 RUNDC1Q96C34 613 aa16.81■□□□□ 0.28
RPS3-216ENST00000530721 DICER1Q9UPY3 1922 aaKnown RBP16.8■□□□□ 0.28
RPS3-216ENST00000530721 NEUROD2Q15784 382 aa16.8■□□□□ 0.28
RPS3-216ENST00000530721 DPY19L2Q6NUT2 758 aa16.8■□□□□ 0.28
RPS3-216ENST00000530721 C7orf43Q8WVR3 580 aa16.8■□□□□ 0.28
RPS3-216ENST00000530721 ZBTB3Q9H5J0 574 aa16.8■□□□□ 0.28
RPS3-216ENST00000530721 PRKRIP1Q9H875 184 aaPredicted RBP16.8■□□□□ 0.28
RPS3-216ENST00000530721 IBTKQ9P2D0 1353 aaPredicted RBP16.79■□□□□ 0.28
RPS3-216ENST00000530721 VEGFAP15692 232 aaPredicted RBP16.79■□□□□ 0.28
RPS3-216ENST00000530721 EIF2S2P20042 333 aaKnown RBP16.79■□□□□ 0.28
RPS3-216ENST00000530721 CCDC93Q567U6 631 aa16.79■□□□□ 0.28
RPS3-216ENST00000530721 GPTP24298 496 aa16.78■□□□□ 0.28
RPS3-216ENST00000530721 ALDH1B1P30837 517 aa16.78■□□□□ 0.28
RPS3-216ENST00000530721 PDIA6Q15084 440 aa16.78■□□□□ 0.28
RPS3-216ENST00000530721 GIGYF2Q6Y7W6 1299 aaKnown RBP16.78■□□□□ 0.28
RPS3-216ENST00000530721 LRP10Q7Z4F1 713 aa16.78■□□□□ 0.28
RPS3-216ENST00000530721 NUTM1Q86Y26 1132 aa16.78■□□□□ 0.28
RPS3-216ENST00000530721 ADAMTS8Q9UP79 889 aa16.78■□□□□ 0.28
RPS3-216ENST00000530721 ABCC12Q96J65 1359 aa16.77■□□□□ 0.28
RPS3-216ENST00000530721 UBN2Q6ZU65 1347 aa16.77■□□□□ 0.28
RPS3-216ENST00000530721 CRY2Q49AN0 593 aa16.77■□□□□ 0.28
RPS3-216ENST00000530721 ZNF34Q8IZ26 560 aa16.77■□□□□ 0.28
RPS3-216ENST00000530721 SMC1BQ8NDV3 1235 aa16.77■□□□□ 0.28
RPS3-216ENST00000530721 TRIM35Q9UPQ4 493 aa16.77■□□□□ 0.28
RPS3-216ENST00000530721 RIC1Q4ADV7 1423 aa16.77■□□□□ 0.27
RPS3-216ENST00000530721 CHL1O00533 1208 aa16.76■□□□□ 0.27
RPS3-216ENST00000530721 SUSD4Q5VX71 490 aa16.76■□□□□ 0.27
RPS3-216ENST00000530721 WDR90Q96KV7 1748 aa16.76■□□□□ 0.27
RPS3-216ENST00000530721 FKBP4Q02790 459 aaKnown RBP eCLIP16.75■□□□□ 0.27
RPS3-216ENST00000530721 PROSER3Q2NL68 480 aa16.75■□□□□ 0.27
RPS3-216ENST00000530721 PARP10Q53GL7 1025 aa16.75■□□□□ 0.27
RPS3-216ENST00000530721 PPP1R42Q7Z4L9 355 aa16.75■□□□□ 0.27
RPS3-216ENST00000530721 RTKN2Q8IZC4 609 aa16.75■□□□□ 0.27
RPS3-216ENST00000530721 LAS1LQ9Y4W2 734 aaKnown RBP16.75■□□□□ 0.27
RPS3-216ENST00000530721 NTSR2O95665 410 aa16.74■□□□□ 0.27
RPS3-216ENST00000530721 ANXA1P04083 346 aa16.74■□□□□ 0.27
RPS3-216ENST00000530721 POTECB2RU33 542 aa16.73■□□□□ 0.27
RPS3-216ENST00000530721 OLFM4Q6UX06 510 aa16.73■□□□□ 0.27
RPS3-216ENST00000530721 NECTIN2Q92692 538 aa16.73■□□□□ 0.27
RPS3-216ENST00000530721 RPGRQ92834 1020 aaKnown RBP16.73■□□□□ 0.27
RPS3-216ENST00000530721 HOXA10P31260 410 aaPredicted RBP16.72■□□□□ 0.27
RPS3-216ENST00000530721 KRT24Q2M2I5 525 aa16.72■□□□□ 0.27
RPS3-216ENST00000530721 HSP90AB3PQ58FF7 597 aa16.72■□□□□ 0.27
RPS3-216ENST00000530721 COPS6Q7L5N1 327 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms