RNA–Protein interactions for RNA: ENST00000530470.1

TRIM29-215, Transcript of tripartite motif containing 29, humanhuman

TSL 2

Gene TRIM29, Length 771 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-215ENST00000530470 PDZRN3Q9UPQ7 1066 aa15.51■□□□□ 0.07
TRIM29-215ENST00000530470 COL11A2P13942 1736 aaPredicted RBP15.5■□□□□ 0.07
TRIM29-215ENST00000530470 RGL2O15211 777 aa15.49■□□□□ 0.07
TRIM29-215ENST00000530470 TMPOP42166 694 aaKnown RBP15.49■□□□□ 0.07
TRIM29-215ENST00000530470 ST5P78524 1137 aa15.49■□□□□ 0.07
TRIM29-215ENST00000530470 LMOD3Q0VAK6 560 aa15.49■□□□□ 0.07
TRIM29-215ENST00000530470 RNF181Q9P0P0 153 aa15.49■□□□□ 0.07
TRIM29-215ENST00000530470 WDR43Q15061 677 aaKnown RBP eCLIP15.48■□□□□ 0.07
TRIM29-215ENST00000530470 CCDC146Q8IYE0 955 aa15.48■□□□□ 0.07
TRIM29-215ENST00000530470 ZNF622Q969S3 477 aaKnown RBP eCLIP15.48■□□□□ 0.07
TRIM29-215ENST00000530470 PRKRIP1Q9H875 184 aaPredicted RBP15.48■□□□□ 0.07
TRIM29-215ENST00000530470 TSPYL4Q9UJ04 414 aa15.48■□□□□ 0.07
TRIM29-215ENST00000530470 KIF3CO14782 793 aa15.47■□□□□ 0.07
TRIM29-215ENST00000530470 SBF1O95248 1867 aa15.47■□□□□ 0.07
TRIM29-215ENST00000530470 NBPF5PQ86XG9 351 aaPredicted RBP15.47■□□□□ 0.07
TRIM29-215ENST00000530470 NIP7Q9Y221 180 aaKnown RBP eCLIP15.47■□□□□ 0.07
TRIM29-215ENST00000530470 RRP7AQ9Y3A4 280 aaKnown RBP15.47■□□□□ 0.07
TRIM29-215ENST00000530470 RASSF7Q02833 373 aa15.46■□□□□ 0.07
TRIM29-215ENST00000530470 HLFQ16534 295 aa15.46■□□□□ 0.07
TRIM29-215ENST00000530470 NGEFQ8N5V2 710 aa15.46■□□□□ 0.07
TRIM29-215ENST00000530470 RUNDC1Q96C34 613 aa15.46■□□□□ 0.07
TRIM29-215ENST00000530470 BABAM1Q9NWV8 329 aa15.46■□□□□ 0.07
TRIM29-215ENST00000530470 MYL6BP14649 208 aa15.45■□□□□ 0.06
TRIM29-215ENST00000530470 NEUROD2Q15784 382 aa15.45■□□□□ 0.06
TRIM29-215ENST00000530470 ADAMTS8Q9UP79 889 aa15.45■□□□□ 0.06
TRIM29-215ENST00000530470 ERVV-1B6SEH8 477 aa15.44■□□□□ 0.06
TRIM29-215ENST00000530470 SRGNP10124 158 aa15.44■□□□□ 0.06
TRIM29-215ENST00000530470 LMNB1P20700 586 aa15.44■□□□□ 0.06
TRIM29-215ENST00000530470 STYK1Q6J9G0 422 aa15.44■□□□□ 0.06
TRIM29-215ENST00000530470 TPTE2Q6XPS3 522 aa15.44■□□□□ 0.06
TRIM29-215ENST00000530470 KIF6Q6ZMV9 814 aa15.44■□□□□ 0.06
TRIM29-215ENST00000530470 CNKSR1Q969H4 720 aa15.44■□□□□ 0.06
TRIM29-215ENST00000530470 NMRK2Q9NPI5 230 aa15.44■□□□□ 0.06
TRIM29-215ENST00000530470 ERBB4Q15303 1308 aa15.43■□□□□ 0.06
TRIM29-215ENST00000530470 MAP3K15Q6ZN16 1313 aa15.43■□□□□ 0.06
TRIM29-215ENST00000530470 KDM2BQ8NHM5 1336 aa15.43■□□□□ 0.06
TRIM29-215ENST00000530470 FAM177BA6PVY3 158 aa15.43■□□□□ 0.06
TRIM29-215ENST00000530470 NFKBIEO00221 500 aa15.43■□□□□ 0.06
TRIM29-215ENST00000530470 C21orf2O43822 256 aa15.43■□□□□ 0.06
TRIM29-215ENST00000530470 PRELPP51888 382 aa15.43■□□□□ 0.06
TRIM29-215ENST00000530470 TTLL7Q6ZT98 887 aa15.43■□□□□ 0.06
TRIM29-215ENST00000530470 MASTLQ96GX5 879 aa15.43■□□□□ 0.06
TRIM29-215ENST00000530470 ZNF219Q9P2Y4 722 aaPredicted RBP15.43■□□□□ 0.06
TRIM29-215ENST00000530470 ARFGEF2Q9Y6D5 1785 aa15.43■□□□□ 0.06
TRIM29-215ENST00000530470 CACNA1SQ13698 1873 aa15.43■□□□□ 0.06
TRIM29-215ENST00000530470 ZC3H4Q9UPT8 1303 aaKnown RBP15.43■□□□□ 0.06
TRIM29-215ENST00000530470 TRIM35Q9UPQ4 493 aa15.42■□□□□ 0.06
TRIM29-215ENST00000530470 NUP98P52948 1817 aa15.42■□□□□ 0.06
TRIM29-215ENST00000530470 TIAM2Q8IVF5 1701 aa15.41■□□□□ 0.06
TRIM29-215ENST00000530470 TOMM70O94826 608 aa15.41■□□□□ 0.06
TRIM29-215ENST00000530470 EIF2S2P20042 333 aaKnown RBP15.41■□□□□ 0.06
TRIM29-215ENST00000530470 GTF2E1P29083 439 aaPredicted RBP15.41■□□□□ 0.06
TRIM29-215ENST00000530470 ZEB1P37275 1124 aaPredicted RBP15.41■□□□□ 0.06
TRIM29-215ENST00000530470 PRPF40BQ6NWY9 871 aaKnown RBP15.41■□□□□ 0.06
TRIM29-215ENST00000530470 ZBTB3Q9H5J0 574 aa15.41■□□□□ 0.06
TRIM29-215ENST00000530470 TNRC6CQ9HCJ0 1690 aaKnown RBP15.41■□□□□ 0.06
TRIM29-215ENST00000530470 SLX4Q8IY92 1834 aa15.4■□□□□ 0.06
TRIM29-215ENST00000530470 FER1L6Q2WGJ9 1857 aa15.4■□□□□ 0.06
TRIM29-215ENST00000530470 CCDC88AQ3V6T2 1871 aa15.4■□□□□ 0.06
TRIM29-215ENST00000530470 KLRG2A4D1S0 409 aaPredicted RBP15.4■□□□□ 0.06
TRIM29-215ENST00000530470 NPR1P16066 1061 aa15.4■□□□□ 0.06
TRIM29-215ENST00000530470 HSPA6P17066 643 aa15.4■□□□□ 0.06
TRIM29-215ENST00000530470 NYXQ9GZU5 481 aa15.4■□□□□ 0.06
TRIM29-215ENST00000530470 LAS1LQ9Y4W2 734 aaKnown RBP15.4■□□□□ 0.06
TRIM29-215ENST00000530470 CHL1O00533 1208 aa15.39■□□□□ 0.05
TRIM29-215ENST00000530470 PDIA6Q15084 440 aa15.39■□□□□ 0.05
TRIM29-215ENST00000530470 SOGA3Q5TF21 947 aa15.39■□□□□ 0.05
TRIM29-215ENST00000530470 LRP10Q7Z4F1 713 aa15.39■□□□□ 0.05
TRIM29-215ENST00000530470 GPTP24298 496 aa15.38■□□□□ 0.05
TRIM29-215ENST00000530470 GIGYF2Q6Y7W6 1299 aaKnown RBP15.38■□□□□ 0.05
TRIM29-215ENST00000530470 NUTM1Q86Y26 1132 aa15.38■□□□□ 0.05
TRIM29-215ENST00000530470 C16orf71Q8IYS4 520 aaPredicted RBP15.38■□□□□ 0.05
TRIM29-215ENST00000530470 TAOK3Q9H2K8 898 aa15.38■□□□□ 0.05
TRIM29-215ENST00000530470 RRAGCQ9HB90 399 aa15.38■□□□□ 0.05
TRIM29-215ENST00000530470 UBN2Q6ZU65 1347 aa15.38■□□□□ 0.05
TRIM29-215ENST00000530470 LTBP3Q9NS15 1303 aa15.38■□□□□ 0.05
TRIM29-215ENST00000530470 ABCC12Q96J65 1359 aa15.37■□□□□ 0.05
TRIM29-215ENST00000530470 IBTKQ9P2D0 1353 aaPredicted RBP15.37■□□□□ 0.05
TRIM29-215ENST00000530470 GLTPD2A6NH11 291 aa15.37■□□□□ 0.05
TRIM29-215ENST00000530470 ANXA1P04083 346 aa15.37■□□□□ 0.05
TRIM29-215ENST00000530470 KRT24Q2M2I5 525 aa15.37■□□□□ 0.05
TRIM29-215ENST00000530470 PROSER3Q2NL68 480 aa15.37■□□□□ 0.05
TRIM29-215ENST00000530470 ERFEQ4G0M1 354 aa15.37■□□□□ 0.05
TRIM29-215ENST00000530470 ZNF34Q8IZ26 560 aa15.37■□□□□ 0.05
TRIM29-215ENST00000530470 NECTIN2Q92692 538 aa15.37■□□□□ 0.05
TRIM29-215ENST00000530470 SUSD4Q5VX71 490 aa15.36■□□□□ 0.05
TRIM29-215ENST00000530470 RBM46Q8TBY0 533 aaKnown RBP15.36■□□□□ 0.05
TRIM29-215ENST00000530470 C7orf43Q8WVR3 580 aa15.36■□□□□ 0.05
TRIM29-215ENST00000530470 DICER1Q9UPY3 1922 aaKnown RBP15.36■□□□□ 0.05
TRIM29-215ENST00000530470 RIC1Q4ADV7 1423 aa15.35■□□□□ 0.05
TRIM29-215ENST00000530470 ALDH1B1P30837 517 aa15.35■□□□□ 0.05
TRIM29-215ENST00000530470 CRY2Q49AN0 593 aa15.35■□□□□ 0.05
TRIM29-215ENST00000530470 CCDC93Q567U6 631 aa15.35■□□□□ 0.05
TRIM29-215ENST00000530470 CFAP44Q96MT7 982 aa15.35■□□□□ 0.05
TRIM29-215ENST00000530470 DDX21Q9NR30 783 aaKnown RBP eCLIP15.35■□□□□ 0.05
TRIM29-215ENST00000530470 APAF1O14727 1248 aa15.34■□□□□ 0.05
TRIM29-215ENST00000530470 NTSR2O95665 410 aa15.34■□□□□ 0.05
TRIM29-215ENST00000530470 PARP10Q53GL7 1025 aa15.34■□□□□ 0.05
TRIM29-215ENST00000530470 COPS6Q7L5N1 327 aa15.34■□□□□ 0.05
TRIM29-215ENST00000530470 PPP1R42Q7Z4L9 355 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms