RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 HIF1AQ16665 826 aa10.48□□□□□ -0.73
CASP4-208ENST00000530309 BICDL1Q6ZP65 573 aa10.48□□□□□ -0.73
CASP4-208ENST00000530309 ABTB2Q8N961 1025 aa10.48□□□□□ -0.73
CASP4-208ENST00000530309 IFT43Q96FT9 208 aa10.48□□□□□ -0.73
CASP4-208ENST00000530309 SOBPA7XYQ1 873 aa10.47□□□□□ -0.73
CASP4-208ENST00000530309 NOM1Q5C9Z4 860 aaKnown RBP10.47□□□□□ -0.73
CASP4-208ENST00000530309 ARSJQ5FYB0 599 aaPredicted RBP10.47□□□□□ -0.73
CASP4-208ENST00000530309 ZIC5Q96T25 663 aa10.47□□□□□ -0.73
CASP4-208ENST00000530309 SENP3-EIF4A1A0A087X0R7 540 aa10.46□□□□□ -0.73
CASP4-208ENST00000530309 F11P03951 625 aa10.46□□□□□ -0.73
CASP4-208ENST00000530309 EIF1AXP47813 144 aaKnown RBP10.46□□□□□ -0.73
CASP4-208ENST00000530309 MARSP56192 900 aaKnown RBP10.46□□□□□ -0.73
CASP4-208ENST00000530309 FAM26DQ5JW98 314 aa10.46□□□□□ -0.73
CASP4-208ENST00000530309 ALKBH2Q6NS38 261 aa10.46□□□□□ -0.73
CASP4-208ENST00000530309 ETFBKMTQ8IXQ9 262 aa10.46□□□□□ -0.73
CASP4-208ENST00000530309 SUSD3Q96L08 255 aa10.46□□□□□ -0.73
CASP4-208ENST00000530309 TRIM47Q96LD4 638 aa10.46□□□□□ -0.73
CASP4-208ENST00000530309 ANKIB1Q9P2G1 1089 aa10.46□□□□□ -0.73
CASP4-208ENST00000530309 BCS1LQ9Y276 419 aa10.46□□□□□ -0.73
CASP4-208ENST00000530309 ZBTB39O15060 712 aa10.45□□□□□ -0.74
CASP4-208ENST00000530309 Q6ZNB5 142 aa10.45□□□□□ -0.74
CASP4-208ENST00000530309 GPAMQ9HCL2 828 aa10.45□□□□□ -0.74
CASP4-208ENST00000530309 GMPR2Q9P2T1 348 aaKnown RBP10.45□□□□□ -0.74
CASP4-208ENST00000530309 PTSQ03393 145 aa10.44□□□□□ -0.74
CASP4-208ENST00000530309 ZNF280CQ8ND82 737 aa10.44□□□□□ -0.74
CASP4-208ENST00000530309 KLRG1Q96E93 195 aa10.44□□□□□ -0.74
CASP4-208ENST00000530309 GAS2L1Q99501 681 aaPredicted RBP10.44□□□□□ -0.74
CASP4-208ENST00000530309 CRISPLD1Q9H336 500 aa10.44□□□□□ -0.74
CASP4-208ENST00000530309 NEUROD4Q9HD90 331 aa10.44□□□□□ -0.74
CASP4-208ENST00000530309 A0A1W2PNR3 127 aa10.43□□□□□ -0.74
CASP4-208ENST00000530309 TGFBR3LH3BV60 316 aa10.43□□□□□ -0.74
CASP4-208ENST00000530309 AAMPQ13685 434 aa10.43□□□□□ -0.74
CASP4-208ENST00000530309 IER5Q5VY09 327 aa10.43□□□□□ -0.74
CASP4-208ENST00000530309 TREML1Q86YW5 311 aa10.43□□□□□ -0.74
CASP4-208ENST00000530309 PGBD3Q8N328 593 aa10.43□□□□□ -0.74
CASP4-208ENST00000530309 DCTN4Q9UJW0 460 aa10.43□□□□□ -0.74
CASP4-208ENST00000530309 MICAL2O94851 1124 aa10.42□□□□□ -0.74
CASP4-208ENST00000530309 LRRC69Q6ZNQ3 347 aa10.42□□□□□ -0.74
CASP4-208ENST00000530309 RGS22Q8NE09 1264 aa10.42□□□□□ -0.74
CASP4-208ENST00000530309 HSH2DQ96JZ2 352 aa10.42□□□□□ -0.74
CASP4-208ENST00000530309 RUBCNLQ9H714 662 aa10.42□□□□□ -0.74
CASP4-208ENST00000530309 SLC35F4A4IF30 521 aa10.41□□□□□ -0.74
CASP4-208ENST00000530309 ZAP70P43403 619 aa10.41□□□□□ -0.74
CASP4-208ENST00000530309 DMGDHQ9UI17 866 aaKnown RBP10.41□□□□□ -0.74
CASP4-208ENST00000530309 BRPF3Q9ULD4 1205 aa10.41□□□□□ -0.74
CASP4-208ENST00000530309 GJA3Q9Y6H8 435 aa10.41□□□□□ -0.74
CASP4-208ENST00000530309 LCE2BO14633 110 aa10.4□□□□□ -0.74
CASP4-208ENST00000530309 NDUFB5O43674 189 aa10.4□□□□□ -0.74
CASP4-208ENST00000530309 FZD6O60353 706 aa10.4□□□□□ -0.74
CASP4-208ENST00000530309 MAPK1P28482 360 aa10.4□□□□□ -0.74
CASP4-208ENST00000530309 DNAJC14Q6Y2X3 702 aaPredicted RBP10.4□□□□□ -0.74
CASP4-208ENST00000530309 NLRP8Q86W28 1048 aa10.4□□□□□ -0.74
CASP4-208ENST00000530309 ATCAYQ86WG3 371 aa10.4□□□□□ -0.74
CASP4-208ENST00000530309 CCDC87Q9NVE4 849 aa10.4□□□□□ -0.74
CASP4-208ENST00000530309 SNRPBP14678 240 aaKnown RBP10.39□□□□□ -0.75
CASP4-208ENST00000530309 EFHC2Q5JST6 749 aa10.39□□□□□ -0.75
CASP4-208ENST00000530309 RIPOR1Q6ZS17 1223 aa10.39□□□□□ -0.75
CASP4-208ENST00000530309 BTLAQ7Z6A9 289 aa10.39□□□□□ -0.75
CASP4-208ENST00000530309 C11orf95C9JLR9 678 aaPredicted RBP10.38□□□□□ -0.75
CASP4-208ENST00000530309 ERCC3P19447 782 aa10.38□□□□□ -0.75
CASP4-208ENST00000530309 LBRQ14739 615 aaKnown RBP10.38□□□□□ -0.75
CASP4-208ENST00000530309 CCDC155Q8N6L0 562 aa10.38□□□□□ -0.75
CASP4-208ENST00000530309 RBCK1Q9BYM8 510 aa10.38□□□□□ -0.75
CASP4-208ENST00000530309 OPLAHO14841 1288 aa10.37□□□□□ -0.75
CASP4-208ENST00000530309 MZF1P28698 734 aaPredicted RBP10.37□□□□□ -0.75
CASP4-208ENST00000530309 IDH3AP50213 366 aa10.37□□□□□ -0.75
CASP4-208ENST00000530309 DNM1Q05193 864 aaKnown RBP10.37□□□□□ -0.75
CASP4-208ENST00000530309 ZSCAN29Q8IWY8 852 aaPredicted RBP10.37□□□□□ -0.75
CASP4-208ENST00000530309 CITED4Q96RK1 184 aa10.37□□□□□ -0.75
CASP4-208ENST00000530309 FAM13BQ9NYF5 915 aa10.37□□□□□ -0.75
CASP4-208ENST00000530309 H7C1W4 665 aa10.36□□□□□ -0.75
CASP4-208ENST00000530309 INPP5BP32019 993 aa10.36□□□□□ -0.75
CASP4-208ENST00000530309 SAMD5Q5TGI4 173 aa10.36□□□□□ -0.75
CASP4-208ENST00000530309 EDEM1Q92611 657 aa10.36□□□□□ -0.75
CASP4-208ENST00000530309 ASB16Q96NS5 453 aa10.36□□□□□ -0.75
CASP4-208ENST00000530309 ANKRD33BA6NCL7 494 aa10.35□□□□□ -0.75
CASP4-208ENST00000530309 ARSDP51689 593 aa10.35□□□□□ -0.75
CASP4-208ENST00000530309 TYRO3Q06418 890 aa10.35□□□□□ -0.75
CASP4-208ENST00000530309 FIGNL1Q6PIW4 674 aa10.35□□□□□ -0.75
CASP4-208ENST00000530309 GPR152Q8TDT2 470 aa10.35□□□□□ -0.75
CASP4-208ENST00000530309 PIK3R5Q8WYR1 880 aa10.35□□□□□ -0.75
CASP4-208ENST00000530309 CEP63Q96MT8 703 aa10.35□□□□□ -0.75
CASP4-208ENST00000530309 NUCKS1Q9H1E3 243 aaKnown RBP10.35□□□□□ -0.75
CASP4-208ENST00000530309 POLIQ9UNA4 740 aa10.35□□□□□ -0.75
CASP4-208ENST00000530309 PDGFAP04085 211 aa10.34□□□□□ -0.75
CASP4-208ENST00000530309 THBS1P07996 1170 aa10.34□□□□□ -0.75
CASP4-208ENST00000530309 PCSK2P16519 638 aa10.34□□□□□ -0.75
CASP4-208ENST00000530309 USP5P45974 858 aa10.34□□□□□ -0.75
CASP4-208ENST00000530309 TRIM22Q8IYM9 498 aa10.34□□□□□ -0.75
CASP4-208ENST00000530309 RGL4Q8IZJ4 473 aa10.34□□□□□ -0.75
CASP4-208ENST00000530309 ZCCHC2Q9C0B9 1178 aaKnown RBP10.34□□□□□ -0.75
CASP4-208ENST00000530309 ITGA6P23229 1130 aa10.33□□□□□ -0.76
CASP4-208ENST00000530309 DBN1Q16643 649 aa10.33□□□□□ -0.76
CASP4-208ENST00000530309 TMC7Q7Z402 723 aa10.33□□□□□ -0.76
CASP4-208ENST00000530309 TMC1Q8TDI8 760 aa10.33□□□□□ -0.76
CASP4-208ENST00000530309 GMCL1Q96IK5 515 aa10.33□□□□□ -0.76
CASP4-208ENST00000530309 CUEDC1Q9NWM3 386 aaPredicted RBP10.33□□□□□ -0.76
CASP4-208ENST00000530309 RPLP1P05386 114 aaKnown RBP10.32□□□□□ -0.76
CASP4-208ENST00000530309 PDE3BQ13370 1112 aa10.32□□□□□ -0.76
CASP4-208ENST00000530309 GJD3Q8N144 294 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms