RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 LMNB1P20700 586 aa18.28■□□□□ 0.52
CTSB-217ENST00000530296 CHRNA5P30532 468 aa18.28■□□□□ 0.52
CTSB-217ENST00000530296 NPM2Q86SE8 214 aaKnown RBP18.28■□□□□ 0.52
CTSB-217ENST00000530296 WDR63Q8IWG1 891 aa18.28■□□□□ 0.52
CTSB-217ENST00000530296 RRAGCQ9HB90 399 aa18.28■□□□□ 0.52
CTSB-217ENST00000530296 COL15A1P39059 1388 aa18.28■□□□□ 0.52
CTSB-217ENST00000530296 TTLL6Q8N841 843 aa18.27■□□□□ 0.52
CTSB-217ENST00000530296 ZNF853P0CG23 659 aa18.26■□□□□ 0.51
CTSB-217ENST00000530296 VEGFAP15692 232 aaPredicted RBP18.26■□□□□ 0.51
CTSB-217ENST00000530296 CHMP4AQ9BY43 222 aa18.26■□□□□ 0.51
CTSB-217ENST00000530296 NRXN2Q9P2S2 1712 aa18.26■□□□□ 0.51
CTSB-217ENST00000530296 A0A087WZG4 1122 aa18.25■□□□□ 0.51
CTSB-217ENST00000530296 GLTPD2A6NH11 291 aa18.25■□□□□ 0.51
CTSB-217ENST00000530296 SERPINB2P05120 415 aa18.25■□□□□ 0.51
CTSB-217ENST00000530296 NFIXQ14938 502 aa18.25■□□□□ 0.51
CTSB-217ENST00000530296 AFDNP55196 1824 aaKnown RBP18.24■□□□□ 0.51
CTSB-217ENST00000530296 H0YIN7 160 aa18.24■□□□□ 0.51
CTSB-217ENST00000530296 HOXB7P09629 217 aa18.24■□□□□ 0.51
CTSB-217ENST00000530296 MBIPQ9NS73 344 aa18.24■□□□□ 0.51
CTSB-217ENST00000530296 SALL2Q9Y467 1007 aaPredicted RBP18.24■□□□□ 0.51
CTSB-217ENST00000530296 USP16Q9Y5T5 823 aa18.24■□□□□ 0.51
CTSB-217ENST00000530296 DLEC1Q9Y238 1755 aa18.24■□□□□ 0.51
CTSB-217ENST00000530296 IL6STP40189 918 aaPredicted RBP18.23■□□□□ 0.51
CTSB-217ENST00000530296 DPY19L2Q6NUT2 758 aa18.23■□□□□ 0.51
CTSB-217ENST00000530296 ERBB4Q15303 1308 aa18.23■□□□□ 0.51
CTSB-217ENST00000530296 CANXP27824 592 aaKnown RBP18.22■□□□□ 0.51
CTSB-217ENST00000530296 ZBTB1Q9Y2K1 713 aa18.22■□□□□ 0.51
CTSB-217ENST00000530296 LAMB4A4D0S4 1761 aa18.22■□□□□ 0.51
CTSB-217ENST00000530296 MYH16Q9H6N6 1097 aa18.21■□□□□ 0.51
CTSB-217ENST00000530296 PDE6BP35913 854 aa18.2■□□□□ 0.5
CTSB-217ENST00000530296 EIF5P55010 431 aaKnown RBP18.2■□□□□ 0.5
CTSB-217ENST00000530296 C2CD5Q86YS7 1000 aa18.2■□□□□ 0.5
CTSB-217ENST00000530296 PRAMEF22A3QJZ6 481 aa18.19■□□□□ 0.5
CTSB-217ENST00000530296 A1BGP04217 495 aa18.19■□□□□ 0.5
CTSB-217ENST00000530296 RASSF7Q02833 373 aa18.19■□□□□ 0.5
CTSB-217ENST00000530296 GOLGA2Q08379 1002 aa18.18■□□□□ 0.5
CTSB-217ENST00000530296 BRIP1Q9BX63 1249 aa18.18■□□□□ 0.5
CTSB-217ENST00000530296 BCL2L12Q9HB09 334 aa18.18■□□□□ 0.5
CTSB-217ENST00000530296 ZNF330Q9Y3S2 320 aaPredicted RBP18.18■□□□□ 0.5
CTSB-217ENST00000530296 PCNTO95613 3336 aa18.18■□□□□ 0.5
CTSB-217ENST00000530296 DUSP27Q5VZP5 1158 aa18.17■□□□□ 0.5
CTSB-217ENST00000530296 ZNF521Q96K83 1311 aa18.17■□□□□ 0.5
CTSB-217ENST00000530296 CARMIL3Q8ND23 1372 aa18.17■□□□□ 0.5
CTSB-217ENST00000530296 EIF2S2P20042 333 aaKnown RBP18.16■□□□□ 0.5
CTSB-217ENST00000530296 HTRA3P83110 453 aa18.16■□□□□ 0.5
CTSB-217ENST00000530296 SOGA3Q5TF21 947 aa18.16■□□□□ 0.5
CTSB-217ENST00000530296 CCDC88AQ3V6T2 1871 aa18.16■□□□□ 0.5
CTSB-217ENST00000530296 TIAM2Q8IVF5 1701 aa18.15■□□□□ 0.5
CTSB-217ENST00000530296 E9PSI1 815 aa18.15■□□□□ 0.5
CTSB-217ENST00000530296 RGL2O15211 777 aa18.15■□□□□ 0.5
CTSB-217ENST00000530296 HDGFL1Q5TGJ6 251 aa18.15■□□□□ 0.5
CTSB-217ENST00000530296 TSR2Q969E8 191 aaKnown RBP18.15■□□□□ 0.5
CTSB-217ENST00000530296 LTBP3Q9NS15 1303 aa18.15■□□□□ 0.5
CTSB-217ENST00000530296 NFKBIEO00221 500 aa18.14■□□□□ 0.49
CTSB-217ENST00000530296 COL13A1Q5TAT6 717 aaPredicted RBP18.14■□□□□ 0.49
CTSB-217ENST00000530296 DZIP3Q86Y13 1208 aaKnown RBP18.14■□□□□ 0.49
CTSB-217ENST00000530296 DBF4Q9UBU7 674 aaPredicted RBP18.14■□□□□ 0.49
CTSB-217ENST00000530296 FANCIQ9NVI1 1328 aa18.14■□□□□ 0.49
CTSB-217ENST00000530296 DICER1Q9UPY3 1922 aaKnown RBP18.13■□□□□ 0.49
CTSB-217ENST00000530296 NBPF26B4DH59 902 aa18.13■□□□□ 0.49
CTSB-217ENST00000530296 NPHP1O15259 732 aa18.13■□□□□ 0.49
CTSB-217ENST00000530296 KRT24Q2M2I5 525 aa18.13■□□□□ 0.49
CTSB-217ENST00000530296 ERFEQ4G0M1 354 aa18.13■□□□□ 0.49
CTSB-217ENST00000530296 CCDC30Q5VVM6 783 aa18.13■□□□□ 0.49
CTSB-217ENST00000530296 NBPF10Q6P3W6 841 aaKnown RBP18.13■□□□□ 0.49
CTSB-217ENST00000530296 BICDL1Q6ZP65 573 aa18.13■□□□□ 0.49
CTSB-217ENST00000530296 NBPF15Q8N660 670 aa18.13■□□□□ 0.49
CTSB-217ENST00000530296 CNKSR1Q969H4 720 aa18.13■□□□□ 0.49
CTSB-217ENST00000530296 ZNF622Q969S3 477 aaKnown RBP eCLIP18.13■□□□□ 0.49
CTSB-217ENST00000530296 SETDB2Q96T68 719 aa18.13■□□□□ 0.49
CTSB-217ENST00000530296 ZNF652Q9Y2D9 606 aa18.13■□□□□ 0.49
CTSB-217ENST00000530296 MYL6BP14649 208 aa18.12■□□□□ 0.49
CTSB-217ENST00000530296 TWISTNBQ3B726 338 aaPredicted RBP18.12■□□□□ 0.49
CTSB-217ENST00000530296 TBC1D9BQ66K14 1250 aa18.12■□□□□ 0.49
CTSB-217ENST00000530296 TNS4Q8IZW8 715 aa18.12■□□□□ 0.49
CTSB-217ENST00000530296 DDX21Q9NR30 783 aaKnown RBP eCLIP18.12■□□□□ 0.49
CTSB-217ENST00000530296 PRELPP51888 382 aa18.11■□□□□ 0.49
CTSB-217ENST00000530296 ST5P78524 1137 aa18.11■□□□□ 0.49
CTSB-217ENST00000530296 HNRNPUQ00839 825 aaKnown RBP eCLIP18.11■□□□□ 0.49
CTSB-217ENST00000530296 CLEC4GQ6UXB4 293 aa18.11■□□□□ 0.49
CTSB-217ENST00000530296 KIF6Q6ZMV9 814 aa18.11■□□□□ 0.49
CTSB-217ENST00000530296 C8orf58Q8NAV2 365 aa18.11■□□□□ 0.49
CTSB-217ENST00000530296 HYPKQ9NX55 129 aa18.11■□□□□ 0.49
CTSB-217ENST00000530296 TBC1D2BQ9UPU7 963 aa18.11■□□□□ 0.49
CTSB-217ENST00000530296 SCN7AQ01118 1682 aa18.11■□□□□ 0.49
CTSB-217ENST00000530296 FER1L6Q2WGJ9 1857 aa18.11■□□□□ 0.49
CTSB-217ENST00000530296 ELL2O00472 640 aaPredicted RBP18.1■□□□□ 0.49
CTSB-217ENST00000530296 C21orf2O43822 256 aa18.1■□□□□ 0.49
CTSB-217ENST00000530296 PIP4K2AP48426 406 aaPredicted RBP18.1■□□□□ 0.49
CTSB-217ENST00000530296 STYK1Q6J9G0 422 aa18.1■□□□□ 0.49
CTSB-217ENST00000530296 PRR5LQ6MZQ0 368 aa18.1■□□□□ 0.49
CTSB-217ENST00000530296 CNBD1Q8NA66 436 aa18.1■□□□□ 0.49
CTSB-217ENST00000530296 STK31Q9BXU1 1019 aa18.1■□□□□ 0.49
CTSB-217ENST00000530296 TAOK3Q9H2K8 898 aa18.1■□□□□ 0.49
CTSB-217ENST00000530296 IQCA1LA6NCM1 817 aa18.09■□□□□ 0.49
CTSB-217ENST00000530296 ERVV-1B6SEH8 477 aa18.09■□□□□ 0.49
CTSB-217ENST00000530296 NECTIN2Q92692 538 aa18.09■□□□□ 0.49
CTSB-217ENST00000530296 ANKRD31Q8N7Z5 1873 aa18.09■□□□□ 0.49
CTSB-217ENST00000530296 CAMTA2O94983 1202 aa18.08■□□□□ 0.48
CTSB-217ENST00000530296 SLFN5Q08AF3 891 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms