RNA–Protein interactions for RNA: ENST00000530170.1

RPS3-215, Transcript of ribosomal protein S3, human

TSL 5

Gene RPS3, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS3-215	ENST00000530170	VSIG10	Q8N0Z9	540 aa		11.25	□□□□□ -0.61
RPS3-215	ENST00000530170	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
RPS3-215	ENST00000530170	COL15A1	P39059	1388 aa		11.25	□□□□□ -0.61
RPS3-215	ENST00000530170	SOX12	O15370	315 aa		11.24	□□□□□ -0.61
RPS3-215	ENST00000530170	ALDH1L1	O75891	902 aa		11.24	□□□□□ -0.61
RPS3-215	ENST00000530170	HSP90AB4P	Q58FF6	505 aa		11.24	□□□□□ -0.61
RPS3-215	ENST00000530170	NBPF6	Q5VWK0	638 aa		11.24	□□□□□ -0.61
RPS3-215	ENST00000530170	NBPF4	Q96M43	638 aa		11.24	□□□□□ -0.61
RPS3-215	ENST00000530170	CWC22	Q9HCG8	908 aa	Known RBP	11.24	□□□□□ -0.61
RPS3-215	ENST00000530170	CPD	O75976	1380 aa		11.24	□□□□□ -0.61
RPS3-215	ENST00000530170	TNS3	Q68CZ2	1445 aa		11.24	□□□□□ -0.61
RPS3-215	ENST00000530170	ST18	O60284	1047 aa		11.23	□□□□□ -0.61
RPS3-215	ENST00000530170	UBTFL1	P0CB47	393 aa	Predicted RBP	11.23	□□□□□ -0.61
RPS3-215	ENST00000530170	MX1	P20591	662 aa		11.23	□□□□□ -0.61
RPS3-215	ENST00000530170	NUCB2	P80303	420 aa		11.23	□□□□□ -0.61
RPS3-215	ENST00000530170	GPR162	Q16538	588 aa		11.23	□□□□□ -0.61
RPS3-215	ENST00000530170	PROM2	Q8N271	834 aa		11.23	□□□□□ -0.61
RPS3-215	ENST00000530170	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.23	□□□□□ -0.61
RPS3-215	ENST00000530170	TAOK2	Q9UL54	1235 aa		11.23	□□□□□ -0.61
RPS3-215	ENST00000530170	ERBB3	P21860	1342 aa		11.23	□□□□□ -0.61
RPS3-215	ENST00000530170	ARFGEF2	Q9Y6D5	1785 aa		11.23	□□□□□ -0.61
RPS3-215	ENST00000530170		F6X3S4	739 aa		11.22	□□□□□ -0.61
RPS3-215	ENST00000530170	UTY	O14607	1347 aa		11.22	□□□□□ -0.61
RPS3-215	ENST00000530170	ADCY9	O60503	1353 aa		11.22	□□□□□ -0.61
RPS3-215	ENST00000530170	GC	P02774	474 aa		11.22	□□□□□ -0.61
RPS3-215	ENST00000530170	CYP2E1	P05181	493 aa	Predicted RBP	11.22	□□□□□ -0.61
RPS3-215	ENST00000530170	PTGER2	P43116	358 aa		11.22	□□□□□ -0.61
RPS3-215	ENST00000530170	AFDN	P55196	1824 aa	Known RBP	11.22	□□□□□ -0.61
RPS3-215	ENST00000530170	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.22	□□□□□ -0.61
RPS3-215	ENST00000530170	USP44	Q9H0E7	712 aa		11.22	□□□□□ -0.61
RPS3-215	ENST00000530170	NUP188	Q5SRE5	1749 aa		11.21	□□□□□ -0.61
RPS3-215	ENST00000530170	RNMT	O43148	476 aa	Known RBP	11.21	□□□□□ -0.61
RPS3-215	ENST00000530170	CAPN15	O75808	1086 aa		11.21	□□□□□ -0.61
RPS3-215	ENST00000530170	MCC	P23508	829 aa		11.21	□□□□□ -0.61
RPS3-215	ENST00000530170	TEF	Q10587	303 aa		11.21	□□□□□ -0.61
RPS3-215	ENST00000530170	SLC4A10	Q6U841	1118 aa		11.21	□□□□□ -0.61
RPS3-215	ENST00000530170	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.21	□□□□□ -0.61
RPS3-215	ENST00000530170	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.21	□□□□□ -0.61
RPS3-215	ENST00000530170	DNAAF4	Q8WXU2	420 aa		11.21	□□□□□ -0.61
RPS3-215	ENST00000530170	STRN4	Q9NRL3	753 aa		11.21	□□□□□ -0.61
RPS3-215	ENST00000530170	MIS18A	Q9NYP9	233 aa		11.21	□□□□□ -0.61
RPS3-215	ENST00000530170	DBF4	Q9UBU7	674 aa	Predicted RBP	11.21	□□□□□ -0.61
RPS3-215	ENST00000530170	TTC41P	Q6P2S7	1318 aa		11.2	□□□□□ -0.62
RPS3-215	ENST00000530170	C1orf141	Q5JVX7	400 aa		11.2	□□□□□ -0.62
RPS3-215	ENST00000530170	BEND3	Q5T5X7	828 aa		11.2	□□□□□ -0.62
RPS3-215	ENST00000530170	TNPO1	Q92973	898 aa	Known RBP	11.2	□□□□□ -0.62
RPS3-215	ENST00000530170	KIF1BP	Q96EK5	621 aa		11.2	□□□□□ -0.62
RPS3-215	ENST00000530170	ESYT1	Q9BSJ8	1104 aa		11.2	□□□□□ -0.62
RPS3-215	ENST00000530170	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.2	□□□□□ -0.62
RPS3-215	ENST00000530170	LRRFIP2	Q9Y608	721 aa	Known RBP	11.2	□□□□□ -0.62
RPS3-215	ENST00000530170	SHANK3	Q9BYB0	1731 aa		11.2	□□□□□ -0.62
RPS3-215	ENST00000530170	KDM6A	O15550	1401 aa	Predicted RBP	11.19	□□□□□ -0.62
RPS3-215	ENST00000530170	SPATA31A1	Q5TZJ5	1347 aa		11.19	□□□□□ -0.62
RPS3-215	ENST00000530170	TNS1	Q9HBL0	1735 aa	Known RBP	11.19	□□□□□ -0.62
RPS3-215	ENST00000530170	NWD2	Q9ULI1	1742 aa		11.19	□□□□□ -0.62
RPS3-215	ENST00000530170	PNMA6E	A0A0J9YXQ4	647 aa		11.19	□□□□□ -0.62
RPS3-215	ENST00000530170	GOLGA6L22	H0YM25	854 aa		11.19	□□□□□ -0.62
RPS3-215	ENST00000530170	TRAK2	O60296	914 aa		11.19	□□□□□ -0.62
RPS3-215	ENST00000530170	CD2BP2	O95400	341 aa	Known RBP	11.19	□□□□□ -0.62
RPS3-215	ENST00000530170	ERC1	Q8IUD2	1116 aa		11.19	□□□□□ -0.62
RPS3-215	ENST00000530170	ANKRD24	Q8TF21	1146 aa		11.19	□□□□□ -0.62
RPS3-215	ENST00000530170	PRDM11	Q9NQV5	511 aa		11.19	□□□□□ -0.62
RPS3-215	ENST00000530170	HYPK	Q9NX55	129 aa		11.19	□□□□□ -0.62
RPS3-215	ENST00000530170	PLCH1	Q4KWH8	1693 aa		11.19	□□□□□ -0.62
RPS3-215	ENST00000530170	RFX7	Q2KHR2	1363 aa		11.18	□□□□□ -0.62
RPS3-215	ENST00000530170	SMARCA5	O60264	1052 aa	Predicted RBP	11.18	□□□□□ -0.62
RPS3-215	ENST00000530170	NUTM2G	Q5VZR2	741 aa		11.18	□□□□□ -0.62
RPS3-215	ENST00000530170	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.18	□□□□□ -0.62
RPS3-215	ENST00000530170	INTS4	Q96HW7	963 aa	Known RBP	11.18	□□□□□ -0.62
RPS3-215	ENST00000530170	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.18	□□□□□ -0.62
RPS3-215	ENST00000530170	MEGF6	O75095	1541 aa		11.18	□□□□□ -0.62
RPS3-215	ENST00000530170	SPEF2	Q9C093	1822 aa		11.18	□□□□□ -0.62
RPS3-215	ENST00000530170	ERBB4	Q15303	1308 aa		11.17	□□□□□ -0.62
RPS3-215	ENST00000530170	RAD50	Q92878	1312 aa		11.17	□□□□□ -0.62
RPS3-215	ENST00000530170	BTBD11	A6QL63	1104 aa		11.17	□□□□□ -0.62
RPS3-215	ENST00000530170	HSP90AA1	P07900	732 aa	Known RBP	11.17	□□□□□ -0.62
RPS3-215	ENST00000530170	HSPA6	P17066	643 aa		11.17	□□□□□ -0.62
RPS3-215	ENST00000530170	CHML	P26374	656 aa		11.17	□□□□□ -0.62
RPS3-215	ENST00000530170	MRE11	P49959	708 aa		11.17	□□□□□ -0.62
RPS3-215	ENST00000530170	EVA1C	P58658	441 aa		11.17	□□□□□ -0.62
RPS3-215	ENST00000530170	CUL4A	Q13619	759 aa		11.17	□□□□□ -0.62
RPS3-215	ENST00000530170	KLHL34	Q8N239	644 aa		11.17	□□□□□ -0.62
RPS3-215	ENST00000530170	CHPF2	Q9P2E5	772 aa		11.17	□□□□□ -0.62
RPS3-215	ENST00000530170	EXOC6B	Q9Y2D4	811 aa		11.17	□□□□□ -0.62
RPS3-215	ENST00000530170	TJP1	Q07157	1748 aa		11.17	□□□□□ -0.62
RPS3-215	ENST00000530170	GOLGA6L3	A6NEY3	463 aa		11.16	□□□□□ -0.62
RPS3-215	ENST00000530170	KLHL40	Q2TBA0	621 aa		11.16	□□□□□ -0.62
RPS3-215	ENST00000530170	KSR2	Q6VAB6	950 aa		11.16	□□□□□ -0.62
RPS3-215	ENST00000530170	PPP1R42	Q7Z4L9	355 aa		11.16	□□□□□ -0.62
RPS3-215	ENST00000530170	USHBP1	Q8N6Y0	703 aa		11.16	□□□□□ -0.62
RPS3-215	ENST00000530170	LINS1	Q8NG48	757 aa		11.16	□□□□□ -0.62
RPS3-215	ENST00000530170	RHPN1	Q8TCX5	695 aa		11.16	□□□□□ -0.62
RPS3-215	ENST00000530170	LTV1	Q96GA3	475 aa	Predicted RBP	11.16	□□□□□ -0.62
RPS3-215	ENST00000530170	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
RPS3-215	ENST00000530170	DDX58	O95786	925 aa	Known RBP	11.15	□□□□□ -0.62
RPS3-215	ENST00000530170	TICAM2	Q86XR7	235 aa		11.15	□□□□□ -0.62
RPS3-215	ENST00000530170	FAM43A	Q8N2R8	423 aa		11.15	□□□□□ -0.62
RPS3-215	ENST00000530170	PI4K2B	Q8TCG2	481 aa		11.15	□□□□□ -0.62
RPS3-215	ENST00000530170	ARX	Q96QS3	562 aa		11.15	□□□□□ -0.62
RPS3-215	ENST00000530170	LGR6	Q9HBX8	967 aa		11.15	□□□□□ -0.62

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