RNA–Protein interactions for RNA: ENST00000529904.2

SNRNP35-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 382 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-206ENST00000529904 PDIA6Q15084 440 aa16.33■□□□□ 0.2
SNRNP35-206ENST00000529904 PROSER3Q2NL68 480 aa16.33■□□□□ 0.2
SNRNP35-206ENST00000529904 TTLL7Q6ZT98 887 aa16.33■□□□□ 0.2
SNRNP35-206ENST00000529904 WDR63Q8IWG1 891 aa16.33■□□□□ 0.2
SNRNP35-206ENST00000529904 TSR2Q969E8 191 aaKnown RBP16.33■□□□□ 0.2
SNRNP35-206ENST00000529904 DDX21Q9NR30 783 aaKnown RBP eCLIP16.33■□□□□ 0.2
SNRNP35-206ENST00000529904 WWC3Q9ULE0 1092 aa16.33■□□□□ 0.2
SNRNP35-206ENST00000529904 MAP3K15Q6ZN16 1313 aa16.33■□□□□ 0.2
SNRNP35-206ENST00000529904 PXDNLA1KZ92 1463 aa16.33■□□□□ 0.2
SNRNP35-206ENST00000529904 AFDNP55196 1824 aaKnown RBP16.32■□□□□ 0.2
SNRNP35-206ENST00000529904 HLFQ16534 295 aa16.32■□□□□ 0.2
SNRNP35-206ENST00000529904 ZBTB3Q9H5J0 574 aa16.32■□□□□ 0.2
SNRNP35-206ENST00000529904 CHPF2Q9P2E5 772 aa16.32■□□□□ 0.2
SNRNP35-206ENST00000529904 DBF4Q9UBU7 674 aaPredicted RBP16.32■□□□□ 0.2
SNRNP35-206ENST00000529904 NIP7Q9Y221 180 aaKnown RBP eCLIP16.32■□□□□ 0.2
SNRNP35-206ENST00000529904 NRXN2Q9P2S2 1712 aa16.31■□□□□ 0.2
SNRNP35-206ENST00000529904 GRIN3BO60391 1043 aa16.31■□□□□ 0.2
SNRNP35-206ENST00000529904 DPEP1P16444 411 aa16.31■□□□□ 0.2
SNRNP35-206ENST00000529904 YBX3P16989 372 aaKnown RBP eCLIP16.31■□□□□ 0.2
SNRNP35-206ENST00000529904 AIMP1Q12904 312 aaKnown RBP16.31■□□□□ 0.2
SNRNP35-206ENST00000529904 CNBD1Q8NA66 436 aa16.31■□□□□ 0.2
SNRNP35-206ENST00000529904 C8orf58Q8NAV2 365 aa16.31■□□□□ 0.2
SNRNP35-206ENST00000529904 CHMP4AQ9BY43 222 aa16.31■□□□□ 0.2
SNRNP35-206ENST00000529904 N4BP2Q86UW6 1770 aaPredicted RBP16.31■□□□□ 0.2
SNRNP35-206ENST00000529904 COPS6Q7L5N1 327 aa16.3■□□□□ 0.2
SNRNP35-206ENST00000529904 LRP10Q7Z4F1 713 aa16.3■□□□□ 0.2
SNRNP35-206ENST00000529904 NBPF5PQ86XG9 351 aaPredicted RBP16.3■□□□□ 0.2
SNRNP35-206ENST00000529904 XAGE3Q8WTP9 111 aa16.3■□□□□ 0.2
SNRNP35-206ENST00000529904 KIAA1551Q9HCM1 1747 aa16.3■□□□□ 0.2
SNRNP35-206ENST00000529904 ST5P78524 1137 aa16.29■□□□□ 0.2
SNRNP35-206ENST00000529904 PRR5LQ6MZQ0 368 aa16.29■□□□□ 0.2
SNRNP35-206ENST00000529904 MIER1Q8N108 512 aa16.29■□□□□ 0.2
SNRNP35-206ENST00000529904 HYPKQ9NX55 129 aa16.29■□□□□ 0.2
SNRNP35-206ENST00000529904 FAM177BA6PVY3 158 aa16.28■□□□□ 0.2
SNRNP35-206ENST00000529904 CHRNA5P30532 468 aa16.28■□□□□ 0.2
SNRNP35-206ENST00000529904 CCDC30Q5VVM6 783 aa16.28■□□□□ 0.2
SNRNP35-206ENST00000529904 TPTE2Q6XPS3 522 aa16.28■□□□□ 0.2
SNRNP35-206ENST00000529904 GIGYF2Q6Y7W6 1299 aaKnown RBP16.28■□□□□ 0.2
SNRNP35-206ENST00000529904 CCDC24Q8N4L8 307 aa16.28■□□□□ 0.2
SNRNP35-206ENST00000529904 TSPYL6Q8N831 410 aa16.28■□□□□ 0.2
SNRNP35-206ENST00000529904 PIM2Q9P1W9 311 aa16.28■□□□□ 0.2
SNRNP35-206ENST00000529904 BCS1LQ9Y276 419 aa16.28■□□□□ 0.2
SNRNP35-206ENST00000529904 FANCIQ9NVI1 1328 aa16.27■□□□□ 0.2
SNRNP35-206ENST00000529904 KCNA3P22001 575 aa16.27■□□□□ 0.2
SNRNP35-206ENST00000529904 GPTP24298 496 aa16.27■□□□□ 0.2
SNRNP35-206ENST00000529904 GTF2E1P29083 439 aaPredicted RBP16.27■□□□□ 0.2
SNRNP35-206ENST00000529904 PDE6BP35913 854 aa16.27■□□□□ 0.2
SNRNP35-206ENST00000529904 BRIP1Q9BX63 1249 aa16.27■□□□□ 0.2
SNRNP35-206ENST00000529904 MYH16Q9H6N6 1097 aa16.27■□□□□ 0.2
SNRNP35-206ENST00000529904 ATP10DQ9P241 1426 aa16.27■□□□□ 0.19
SNRNP35-206ENST00000529904 NUP98P52948 1817 aa16.26■□□□□ 0.19
SNRNP35-206ENST00000529904 H0YIN7 160 aa16.26■□□□□ 0.19
SNRNP35-206ENST00000529904 GOLGA2Q08379 1002 aa16.26■□□□□ 0.19
SNRNP35-206ENST00000529904 TWISTNBQ3B726 338 aaPredicted RBP16.26■□□□□ 0.19
SNRNP35-206ENST00000529904 C2CD5Q86YS7 1000 aa16.26■□□□□ 0.19
SNRNP35-206ENST00000529904 NYXQ9GZU5 481 aa16.26■□□□□ 0.19
SNRNP35-206ENST00000529904 YY1P25490 414 aa16.25■□□□□ 0.19
SNRNP35-206ENST00000529904 DALRD3Q5D0E6 543 aaKnown RBP16.25■□□□□ 0.19
SNRNP35-206ENST00000529904 STK31Q9BXU1 1019 aa16.25■□□□□ 0.19
SNRNP35-206ENST00000529904 HSP90AB3PQ58FF7 597 aa16.24■□□□□ 0.19
SNRNP35-206ENST00000529904 ANKRD13DQ6ZTN6 518 aa16.24■□□□□ 0.19
SNRNP35-206ENST00000529904 ZNF34Q8IZ26 560 aa16.24■□□□□ 0.19
SNRNP35-206ENST00000529904 PLBD2Q8NHP8 589 aa16.24■□□□□ 0.19
SNRNP35-206ENST00000529904 SPINK5Q9NQ38 1064 aaPredicted RBP16.24■□□□□ 0.19
SNRNP35-206ENST00000529904 PDZRN3Q9UPQ7 1066 aa16.24■□□□□ 0.19
SNRNP35-206ENST00000529904 UBN2Q6ZU65 1347 aa16.23■□□□□ 0.19
SNRNP35-206ENST00000529904 EXOSC9Q06265 439 aaKnown RBP16.23■□□□□ 0.19
SNRNP35-206ENST00000529904 PARP10Q53GL7 1025 aa16.23■□□□□ 0.19
SNRNP35-206ENST00000529904 PPP1R42Q7Z4L9 355 aa16.23■□□□□ 0.19
SNRNP35-206ENST00000529904 PHAXQ9H814 394 aaKnown RBP16.23■□□□□ 0.19
SNRNP35-206ENST00000529904 ZNF521Q96K83 1311 aa16.22■□□□□ 0.19
SNRNP35-206ENST00000529904 TCIRG1Q13488 830 aa16.22■□□□□ 0.19
SNRNP35-206ENST00000529904 SUSD4Q5VX71 490 aa16.22■□□□□ 0.19
SNRNP35-206ENST00000529904 ZNF622Q969S3 477 aaKnown RBP eCLIP16.22■□□□□ 0.19
SNRNP35-206ENST00000529904 BRCA1P38398 1863 aaKnown RBP16.22■□□□□ 0.19
SNRNP35-206ENST00000529904 ANKRD31Q8N7Z5 1873 aa16.22■□□□□ 0.19
SNRNP35-206ENST00000529904 TCERG1O14776 1098 aaKnown RBP16.21■□□□□ 0.19
SNRNP35-206ENST00000529904 RIC3Q7Z5B4 369 aa16.21■□□□□ 0.19
SNRNP35-206ENST00000529904 NUTM1Q86Y26 1132 aa16.21■□□□□ 0.19
SNRNP35-206ENST00000529904 TTLL6Q8N841 843 aa16.21■□□□□ 0.19
SNRNP35-206ENST00000529904 IBTKQ9P2D0 1353 aaPredicted RBP16.21■□□□□ 0.19
SNRNP35-206ENST00000529904 DLEC1Q9Y238 1755 aa16.21■□□□□ 0.18
SNRNP35-206ENST00000529904 DDX58O95786 925 aaKnown RBP16.2■□□□□ 0.18
SNRNP35-206ENST00000529904 ERFEQ4G0M1 354 aa16.2■□□□□ 0.18
SNRNP35-206ENST00000529904 ARHGAP27Q6ZUM4 889 aa16.2■□□□□ 0.18
SNRNP35-206ENST00000529904 UTP14AQ9BVJ6 771 aaKnown RBP16.2■□□□□ 0.18
SNRNP35-206ENST00000529904 ANKRD36CQ5JPF3 1778 aa16.2■□□□□ 0.18
SNRNP35-206ENST00000529904 CHD4Q14839 1912 aa16.19■□□□□ 0.18
SNRNP35-206ENST00000529904 E9PSI1 815 aa16.19■□□□□ 0.18
SNRNP35-206ENST00000529904 NTSR2O95665 410 aa16.19■□□□□ 0.18
SNRNP35-206ENST00000529904 SLC4A2P04920 1241 aa16.19■□□□□ 0.18
SNRNP35-206ENST00000529904 SRGNP10124 158 aa16.19■□□□□ 0.18
SNRNP35-206ENST00000529904 NLRP10Q86W26 655 aa16.19■□□□□ 0.18
SNRNP35-206ENST00000529904 ARFGEF1Q9Y6D6 1849 aa16.18■□□□□ 0.18
SNRNP35-206ENST00000529904 VAMP4O75379 141 aa16.18■□□□□ 0.18
SNRNP35-206ENST00000529904 STYK1Q6J9G0 422 aa16.18■□□□□ 0.18
SNRNP35-206ENST00000529904 CNKSR1Q969H4 720 aa16.18■□□□□ 0.18
SNRNP35-206ENST00000529904 MASTLQ96GX5 879 aa16.18■□□□□ 0.18
SNRNP35-206ENST00000529904 TRMT112Q9UI30 125 aaKnown RBP16.18■□□□□ 0.18
SNRNP35-206ENST00000529904 COL11A2P13942 1736 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms