RNA–Protein interactions for RNA: ENST00000529273.1

ROM1-204, Transcript of retinal outer segment membrane protein 1, humanhuman

TSL 4

Gene ROM1, Length 249 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-204ENST00000529273 NGEFQ8N5V2 710 aa36.36■■■■□ 3.41
ROM1-204ENST00000529273 RUNDC1Q96C34 613 aa36.35■■■■□ 3.41
ROM1-204ENST00000529273 NIP7Q9Y221 180 aaKnown RBP eCLIP36.35■■■■□ 3.41
ROM1-204ENST00000529273 KIF3CO14782 793 aa36.34■■■■□ 3.41
ROM1-204ENST00000529273 NEUROD2Q15784 382 aa36.34■■■■□ 3.41
ROM1-204ENST00000529273 HLFQ16534 295 aa36.34■■■■□ 3.41
ROM1-204ENST00000529273 ADAMTS8Q9UP79 889 aa36.34■■■■□ 3.41
ROM1-204ENST00000529273 DLEC1Q9Y238 1755 aa36.34■■■■□ 3.41
ROM1-204ENST00000529273 ANKRD31Q8N7Z5 1873 aa36.33■■■■□ 3.41
ROM1-204ENST00000529273 LAMB4A4D0S4 1761 aa36.33■■■■□ 3.41
ROM1-204ENST00000529273 RASSF7Q02833 373 aa36.33■■■■□ 3.41
ROM1-204ENST00000529273 BABAM1Q9NWV8 329 aa36.33■■■■□ 3.41
ROM1-204ENST00000529273 MYL6BP14649 208 aa36.31■■■■□ 3.4
ROM1-204ENST00000529273 TPTE2Q6XPS3 522 aa36.3■■■■□ 3.4
ROM1-204ENST00000529273 ERVV-1B6SEH8 477 aa36.28■■■■□ 3.4
ROM1-204ENST00000529273 SRGNP10124 158 aa36.28■■■■□ 3.4
ROM1-204ENST00000529273 STYK1Q6J9G0 422 aa36.28■■■■□ 3.4
ROM1-204ENST00000529273 TTLL7Q6ZT98 887 aa36.28■■■■□ 3.4
ROM1-204ENST00000529273 FAM177BA6PVY3 158 aa36.27■■■■□ 3.4
ROM1-204ENST00000529273 KIF6Q6ZMV9 814 aa36.27■■■■□ 3.4
ROM1-204ENST00000529273 CNKSR1Q969H4 720 aa36.27■■■■□ 3.4
ROM1-204ENST00000529273 NMRK2Q9NPI5 230 aa36.27■■■■□ 3.4
ROM1-204ENST00000529273 ZNF219Q9P2Y4 722 aaPredicted RBP36.27■■■■□ 3.4
ROM1-204ENST00000529273 ERBB4Q15303 1308 aa36.27■■■■□ 3.4
ROM1-204ENST00000529273 MAP3K15Q6ZN16 1313 aa36.27■■■■□ 3.4
ROM1-204ENST00000529273 C21orf2O43822 256 aa36.26■■■■□ 3.4
ROM1-204ENST00000529273 LMNB1P20700 586 aa36.26■■■■□ 3.4
ROM1-204ENST00000529273 MASTLQ96GX5 879 aa36.26■■■■□ 3.4
ROM1-204ENST00000529273 TRIM35Q9UPQ4 493 aa36.26■■■■□ 3.4
ROM1-204ENST00000529273 ZEB1P37275 1124 aaPredicted RBP36.25■■■■□ 3.39
ROM1-204ENST00000529273 PRELPP51888 382 aa36.25■■■■□ 3.39
ROM1-204ENST00000529273 NFKBIEO00221 500 aa36.24■■■■□ 3.39
ROM1-204ENST00000529273 EIF2S2P20042 333 aaKnown RBP36.24■■■■□ 3.39
ROM1-204ENST00000529273 COL11A2P13942 1736 aaPredicted RBP36.24■■■■□ 3.39
ROM1-204ENST00000529273 CHL1O00533 1208 aa36.22■■■■□ 3.39
ROM1-204ENST00000529273 ZBTB3Q9H5J0 574 aa36.22■■■■□ 3.39
ROM1-204ENST00000529273 PRPF40BQ6NWY9 871 aaKnown RBP36.21■■■■□ 3.39
ROM1-204ENST00000529273 KDM2BQ8NHM5 1336 aa36.21■■■■□ 3.39
ROM1-204ENST00000529273 KLRG2A4D1S0 409 aaPredicted RBP36.2■■■■□ 3.39
ROM1-204ENST00000529273 GTF2E1P29083 439 aaPredicted RBP36.2■■■■□ 3.39
ROM1-204ENST00000529273 PDIA6Q15084 440 aa36.2■■■■□ 3.39
ROM1-204ENST00000529273 LAS1LQ9Y4W2 734 aaKnown RBP36.2■■■■□ 3.39
ROM1-204ENST00000529273 SBF1O95248 1867 aa36.2■■■■□ 3.38
ROM1-204ENST00000529273 ZC3H4Q9UPT8 1303 aaKnown RBP36.18■■■■□ 3.38
ROM1-204ENST00000529273 NPR1P16066 1061 aa36.18■■■■□ 3.38
ROM1-204ENST00000529273 LRP10Q7Z4F1 713 aa36.18■■■■□ 3.38
ROM1-204ENST00000529273 TOMM70O94826 608 aa36.17■■■■□ 3.38
ROM1-204ENST00000529273 NYXQ9GZU5 481 aa36.17■■■■□ 3.38
ROM1-204ENST00000529273 GPTP24298 496 aa36.16■■■■□ 3.38
ROM1-204ENST00000529273 PROSER3Q2NL68 480 aa36.16■■■■□ 3.38
ROM1-204ENST00000529273 ANXA1P04083 346 aa36.15■■■■□ 3.38
ROM1-204ENST00000529273 HSPA6P17066 643 aa36.15■■■■□ 3.38
ROM1-204ENST00000529273 KRT24Q2M2I5 525 aa36.15■■■■□ 3.38
ROM1-204ENST00000529273 NECTIN2Q92692 538 aa36.15■■■■□ 3.38
ROM1-204ENST00000529273 GIGYF2Q6Y7W6 1299 aaKnown RBP36.14■■■■□ 3.38
ROM1-204ENST00000529273 NUTM1Q86Y26 1132 aa36.14■■■■□ 3.38
ROM1-204ENST00000529273 SOGA3Q5TF21 947 aa36.13■■■■□ 3.37
ROM1-204ENST00000529273 ZNF34Q8IZ26 560 aa36.13■■■■□ 3.37
ROM1-204ENST00000529273 RRAGCQ9HB90 399 aa36.13■■■■□ 3.37
ROM1-204ENST00000529273 UBN2Q6ZU65 1347 aa36.12■■■■□ 3.37
ROM1-204ENST00000529273 SLX4Q8IY92 1834 aa36.11■■■■□ 3.37
ROM1-204ENST00000529273 APAF1O14727 1248 aa36.11■■■■□ 3.37
ROM1-204ENST00000529273 ERFEQ4G0M1 354 aa36.11■■■■□ 3.37
ROM1-204ENST00000529273 SUSD4Q5VX71 490 aa36.11■■■■□ 3.37
ROM1-204ENST00000529273 C7orf43Q8WVR3 580 aa36.11■■■■□ 3.37
ROM1-204ENST00000529273 TAOK3Q9H2K8 898 aa36.11■■■■□ 3.37
ROM1-204ENST00000529273 LTBP3Q9NS15 1303 aa36.1■■■■□ 3.37
ROM1-204ENST00000529273 C16orf71Q8IYS4 520 aaPredicted RBP36.1■■■■□ 3.37
ROM1-204ENST00000529273 ABCC12Q96J65 1359 aa36.1■■■■□ 3.37
ROM1-204ENST00000529273 GLTPD2A6NH11 291 aa36.09■■■■□ 3.37
ROM1-204ENST00000529273 NUP98P52948 1817 aa36.08■■■■□ 3.37
ROM1-204ENST00000529273 CFAP44Q96MT7 982 aa36.08■■■■□ 3.37
ROM1-204ENST00000529273 IBTKQ9P2D0 1353 aaPredicted RBP36.07■■■■□ 3.36
ROM1-204ENST00000529273 COPS6Q7L5N1 327 aa36.07■■■■□ 3.36
ROM1-204ENST00000529273 CRY2Q49AN0 593 aa36.06■■■■□ 3.36
ROM1-204ENST00000529273 RBM46Q8TBY0 533 aaKnown RBP36.06■■■■□ 3.36
ROM1-204ENST00000529273 XAGE3Q8WTP9 111 aa36.06■■■■□ 3.36
ROM1-204ENST00000529273 DDX21Q9NR30 783 aaKnown RBP eCLIP36.06■■■■□ 3.36
ROM1-204ENST00000529273 ALDH1B1P30837 517 aa36.05■■■■□ 3.36
ROM1-204ENST00000529273 AIMP1Q12904 312 aaKnown RBP36.05■■■■□ 3.36
ROM1-204ENST00000529273 CCDC93Q567U6 631 aa36.05■■■■□ 3.36
ROM1-204ENST00000529273 NTSR2O95665 410 aa36.04■■■■□ 3.36
ROM1-204ENST00000529273 FER1L6Q2WGJ9 1857 aa36.04■■■■□ 3.36
ROM1-204ENST00000529273 PARP10Q53GL7 1025 aa36.04■■■■□ 3.36
ROM1-204ENST00000529273 PPP1R42Q7Z4L9 355 aa36.04■■■■□ 3.36
ROM1-204ENST00000529273 HOXB7P09629 217 aa36.03■■■■□ 3.36
ROM1-204ENST00000529273 CCDC184Q52MB2 194 aa36.03■■■■□ 3.36
ROM1-204ENST00000529273 MBIPQ9NS73 344 aa36.03■■■■□ 3.36
ROM1-204ENST00000529273 ARFGEF2Q9Y6D5 1785 aa36.02■■■■□ 3.36
ROM1-204ENST00000529273 HDGFL1Q5TGJ6 251 aa36.02■■■■□ 3.36
ROM1-204ENST00000529273 CHPF2Q9P2E5 772 aa36.02■■■■□ 3.36
ROM1-204ENST00000529273 ZNF853P0CG23 659 aa36.01■■■■□ 3.36
ROM1-204ENST00000529273 DPY19L2Q6NUT2 758 aa36.01■■■■□ 3.36
ROM1-204ENST00000529273 OLFM4Q6UX06 510 aa36.01■■■■□ 3.36
ROM1-204ENST00000529273 TNRC6CQ9HCJ0 1690 aaKnown RBP36■■■■□ 3.35
ROM1-204ENST00000529273 RIC1Q4ADV7 1423 aa36■■■■□ 3.35
ROM1-204ENST00000529273 CACNA1SQ13698 1873 aa36■■■■□ 3.35
ROM1-204ENST00000529273 ZNF316A6NFI3 1004 aaPredicted RBP35.99■■■■□ 3.35
ROM1-204ENST00000529273 VEGFAP15692 232 aaPredicted RBP35.99■■■■□ 3.35
ROM1-204ENST00000529273 DUSP27Q5VZP5 1158 aa35.99■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms