RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 CCDC146Q8IYE0 955 aa15.82■□□□□ 0.12
COPB1-206ENST00000529210 TTLL6Q8N841 843 aa15.82■□□□□ 0.12
COPB1-206ENST00000529210 CNBD1Q8NA66 436 aa15.82■□□□□ 0.12
COPB1-206ENST00000529210 NUP98P52948 1817 aa15.81■□□□□ 0.12
COPB1-206ENST00000529210 ARHGAP27Q6ZUM4 889 aa15.81■□□□□ 0.12
COPB1-206ENST00000529210 LRP10Q7Z4F1 713 aa15.81■□□□□ 0.12
COPB1-206ENST00000529210 C2CD5Q86YS7 1000 aa15.81■□□□□ 0.12
COPB1-206ENST00000529210 ARFGEF2Q9Y6D5 1785 aa15.81■□□□□ 0.12
COPB1-206ENST00000529210 MAP3K15Q6ZN16 1313 aa15.8■□□□□ 0.12
COPB1-206ENST00000529210 KLRG2A4D1S0 409 aaPredicted RBP15.8■□□□□ 0.12
COPB1-206ENST00000529210 C1QTNF8P60827 252 aa15.8■□□□□ 0.12
COPB1-206ENST00000529210 ST5P78524 1137 aa15.8■□□□□ 0.12
COPB1-206ENST00000529210 RRP7AQ9Y3A4 280 aaKnown RBP15.8■□□□□ 0.12
COPB1-206ENST00000529210 IBTKQ9P2D0 1353 aaPredicted RBP15.79■□□□□ 0.12
COPB1-206ENST00000529210 ZNF316A6NFI3 1004 aaPredicted RBP15.79■□□□□ 0.12
COPB1-206ENST00000529210 HOXB7P09629 217 aa15.79■□□□□ 0.12
COPB1-206ENST00000529210 PDIA6Q15084 440 aa15.79■□□□□ 0.12
COPB1-206ENST00000529210 HLFQ16534 295 aa15.79■□□□□ 0.12
COPB1-206ENST00000529210 ZC3H4Q9UPT8 1303 aaKnown RBP15.78■□□□□ 0.12
COPB1-206ENST00000529210 SRGNP10124 158 aa15.78■□□□□ 0.12
COPB1-206ENST00000529210 STYK1Q6J9G0 422 aa15.78■□□□□ 0.12
COPB1-206ENST00000529210 TPTE2Q6XPS3 522 aa15.78■□□□□ 0.12
COPB1-206ENST00000529210 NBPF5PQ86XG9 351 aaPredicted RBP15.78■□□□□ 0.12
COPB1-206ENST00000529210 CFAP44Q96MT7 982 aa15.78■□□□□ 0.12
COPB1-206ENST00000529210 GPBP1L1Q9HC44 474 aaPredicted RBP15.78■□□□□ 0.12
COPB1-206ENST00000529210 NIP7Q9Y221 180 aaKnown RBP eCLIP15.78■□□□□ 0.12
COPB1-206ENST00000529210 RIC1Q4ADV7 1423 aa15.77■□□□□ 0.12
COPB1-206ENST00000529210 ZNF853P0CG23 659 aa15.77■□□□□ 0.12
COPB1-206ENST00000529210 NEUROD2Q15784 382 aa15.77■□□□□ 0.12
COPB1-206ENST00000529210 FER1L6Q2WGJ9 1857 aa15.77■□□□□ 0.11
COPB1-206ENST00000529210 C9orf131Q5VYM1 1079 aa15.76■□□□□ 0.11
COPB1-206ENST00000529210 GIGYF2Q6Y7W6 1299 aaKnown RBP15.76■□□□□ 0.11
COPB1-206ENST00000529210 KIF6Q6ZMV9 814 aa15.76■□□□□ 0.11
COPB1-206ENST00000529210 TTLL7Q6ZT98 887 aa15.76■□□□□ 0.11
COPB1-206ENST00000529210 CNKSR1Q969H4 720 aa15.76■□□□□ 0.11
COPB1-206ENST00000529210 MASTLQ96GX5 879 aa15.76■□□□□ 0.11
COPB1-206ENST00000529210 MYL6BP14649 208 aa15.75■□□□□ 0.11
COPB1-206ENST00000529210 NCBP3Q53F19 620 aaKnown RBP15.75■□□□□ 0.11
COPB1-206ENST00000529210 NYXQ9GZU5 481 aa15.75■□□□□ 0.11
COPB1-206ENST00000529210 LTBP3Q9NS15 1303 aa15.74■□□□□ 0.11
COPB1-206ENST00000529210 SLX4Q8IY92 1834 aa15.74■□□□□ 0.11
COPB1-206ENST00000529210 APAF1O14727 1248 aa15.74■□□□□ 0.11
COPB1-206ENST00000529210 CALD1Q05682 793 aaKnown RBP15.74■□□□□ 0.11
COPB1-206ENST00000529210 ZNF34Q8IZ26 560 aa15.74■□□□□ 0.11
COPB1-206ENST00000529210 CCDC24Q8N4L8 307 aa15.74■□□□□ 0.11
COPB1-206ENST00000529210 NFKBIEO00221 500 aa15.73■□□□□ 0.11
COPB1-206ENST00000529210 KIF3CO14782 793 aa15.73■□□□□ 0.11
COPB1-206ENST00000529210 NPHP1O15259 732 aa15.73■□□□□ 0.11
COPB1-206ENST00000529210 NPR1P16066 1061 aa15.73■□□□□ 0.11
COPB1-206ENST00000529210 LMNB1P20700 586 aa15.73■□□□□ 0.11
COPB1-206ENST00000529210 CRY2Q49AN0 593 aa15.73■□□□□ 0.11
COPB1-206ENST00000529210 ZNF622Q969S3 477 aaKnown RBP eCLIP15.73■□□□□ 0.116e-21■□□□□ 8.9
COPB1-206ENST00000529210 DDX21Q9NR30 783 aaKnown RBP eCLIP15.73■□□□□ 0.11
COPB1-206ENST00000529210 IFT57Q9NWB7 429 aa15.73■□□□□ 0.11
COPB1-206ENST00000529210 DICER1Q9UPY3 1922 aaKnown RBP15.72■□□□□ 0.11
COPB1-206ENST00000529210 ANKRD36CQ5JPF3 1778 aa15.72■□□□□ 0.11
COPB1-206ENST00000529210 UBN2Q6ZU65 1347 aa15.72■□□□□ 0.11
COPB1-206ENST00000529210 EIF2S2P20042 333 aaKnown RBP15.72■□□□□ 0.11
COPB1-206ENST00000529210 CCDC27Q2M243 656 aa15.72■□□□□ 0.11
COPB1-206ENST00000529210 PROSER3Q2NL68 480 aa15.72■□□□□ 0.11
COPB1-206ENST00000529210 CCDC184Q52MB2 194 aa15.72■□□□□ 0.11
COPB1-206ENST00000529210 PARP10Q53GL7 1025 aa15.72■□□□□ 0.11
COPB1-206ENST00000529210 SOGA3Q5TF21 947 aa15.72■□□□□ 0.11
COPB1-206ENST00000529210 NGEFQ8N5V2 710 aa15.72■□□□□ 0.11
COPB1-206ENST00000529210 C7orf43Q8WVR3 580 aa15.72■□□□□ 0.11
COPB1-206ENST00000529210 RNF181Q9P0P0 153 aa15.72■□□□□ 0.11
COPB1-206ENST00000529210 TNRC6CQ9HCJ0 1690 aaKnown RBP15.72■□□□□ 0.11
COPB1-206ENST00000529210 CACNA1SQ13698 1873 aa15.71■□□□□ 0.11
COPB1-206ENST00000529210 CCDC88AQ3V6T2 1871 aa15.71■□□□□ 0.11
COPB1-206ENST00000529210 PRELPP51888 382 aa15.71■□□□□ 0.11
COPB1-206ENST00000529210 RASSF7Q02833 373 aa15.71■□□□□ 0.11
COPB1-206ENST00000529210 PRPF40BQ6NWY9 871 aaKnown RBP15.71■□□□□ 0.11
COPB1-206ENST00000529210 ZBTB3Q9H5J0 574 aa15.71■□□□□ 0.11
COPB1-206ENST00000529210 MBIPQ9NS73 344 aa15.71■□□□□ 0.11
COPB1-206ENST00000529210 RNF123Q5XPI4 1314 aa15.7■□□□□ 0.1
COPB1-206ENST00000529210 NTSR2O95665 410 aa15.7■□□□□ 0.1
COPB1-206ENST00000529210 GNAI1P63096 354 aa15.7■□□□□ 0.1
COPB1-206ENST00000529210 KRT24Q2M2I5 525 aa15.7■□□□□ 0.1
COPB1-206ENST00000529210 TIAM2Q8IVF5 1701 aa15.7■□□□□ 0.1
COPB1-206ENST00000529210 ABCC12Q96J65 1359 aa15.7■□□□□ 0.1
COPB1-206ENST00000529210 ANP32CO43423 234 aa15.69■□□□□ 0.1
COPB1-206ENST00000529210 C21orf2O43822 256 aa15.69■□□□□ 0.1
COPB1-206ENST00000529210 ALDH1B1P30837 517 aa15.69■□□□□ 0.1
COPB1-206ENST00000529210 HSP90AB3PQ58FF7 597 aa15.69■□□□□ 0.1
COPB1-206ENST00000529210 HDGFL1Q5TGJ6 251 aa15.69■□□□□ 0.1
COPB1-206ENST00000529210 SUSD4Q5VX71 490 aa15.69■□□□□ 0.1
COPB1-206ENST00000529210 COPS6Q7L5N1 327 aa15.69■□□□□ 0.1
COPB1-206ENST00000529210 PPP1R42Q7Z4L9 355 aa15.69■□□□□ 0.1
COPB1-206ENST00000529210 ZNF526Q8TF50 670 aaPredicted RBP15.69■□□□□ 0.1
COPB1-206ENST00000529210 LAS1LQ9Y4W2 734 aaKnown RBP15.69■□□□□ 0.1
COPB1-206ENST00000529210 KDM2BQ8NHM5 1336 aa15.68■□□□□ 0.1
COPB1-206ENST00000529210 ANXA1P04083 346 aa15.68■□□□□ 0.1
COPB1-206ENST00000529210 GTF2E1P29083 439 aaPredicted RBP15.68■□□□□ 0.1
COPB1-206ENST00000529210 HOXA10P31260 410 aaPredicted RBP15.68■□□□□ 0.1
COPB1-206ENST00000529210 SLC10A5Q5PT55 438 aa15.68■□□□□ 0.1
COPB1-206ENST00000529210 DUSP27Q5VZP5 1158 aa15.68■□□□□ 0.1
COPB1-206ENST00000529210 XAGE3Q8WTP9 111 aa15.68■□□□□ 0.1
COPB1-206ENST00000529210 DBF4Q9UBU7 674 aaPredicted RBP15.68■□□□□ 0.1
COPB1-206ENST00000529210 SNED1Q8TER0 1413 aa15.68■□□□□ 0.1
COPB1-206ENST00000529210 GPTP24298 496 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms